RNA–Protein interactions for RNA: ENST00000581460.1

RAB11FIP4-207, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 4

Gene RAB11FIP4, Length 617 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-207ENST00000581460 BAALC-AS2P0C853 105 aa9.73□□□□□ -0.85
RAB11FIP4-207ENST00000581460 C21orf62-AS1Q17RA5 79 aa9.73□□□□□ -0.85
RAB11FIP4-207ENST00000581460 C9JAW5 83 aa9.72□□□□□ -0.85
RAB11FIP4-207ENST00000581460 J3KT08 172 aa9.71□□□□□ -0.86
RAB11FIP4-207ENST00000581460 MPLKIPQ8TAP9 179 aa9.71□□□□□ -0.86
RAB11FIP4-207ENST00000581460 MTURNQ8N3F0 131 aa9.67□□□□□ -0.86
RAB11FIP4-207ENST00000581460 NDUFB1O75438 58 aa9.66□□□□□ -0.86
RAB11FIP4-207ENST00000581460 ZCCHC13Q8WW36 166 aaKnown RBP9.66□□□□□ -0.86
RAB11FIP4-207ENST00000581460 MT2AP02795 61 aa9.65□□□□□ -0.86
RAB11FIP4-207ENST00000581460 Q6ZQT0 140 aa9.65□□□□□ -0.86
RAB11FIP4-207ENST00000581460 ATXN8Q156A1 80 aa9.63□□□□□ -0.87
RAB11FIP4-207ENST00000581460 JMJD7-PLA2G4BH0Y9G9 81 aa9.61□□□□□ -0.87
RAB11FIP4-207ENST00000581460 M0R143 59 aa9.61□□□□□ -0.87
RAB11FIP4-207ENST00000581460 LYRM7Q5U5X0 104 aa9.61□□□□□ -0.87
RAB11FIP4-207ENST00000581460 USH2AO75445 5202 aa9.6□□□□□ -0.87
RAB11FIP4-207ENST00000581460 SPINK7P58062 85 aa9.6□□□□□ -0.87
RAB11FIP4-207ENST00000581460 NAA38Q9BRA0 125 aaKnown RBP9.59□□□□□ -0.87
RAB11FIP4-207ENST00000581460 KRTAP10-10P60014 251 aa9.58□□□□□ -0.88
RAB11FIP4-207ENST00000581460 MT1FP04733 61 aa9.57□□□□□ -0.88
RAB11FIP4-207ENST00000581460 LOC110117498A0A087WWA1 95 aa9.56□□□□□ -0.88
RAB11FIP4-207ENST00000581460 A8MWP4 228 aa9.56□□□□□ -0.88
RAB11FIP4-207ENST00000581460 PDE6GP18545 87 aa9.56□□□□□ -0.88
RAB11FIP4-207ENST00000581460 Q8N9P0 234 aaPredicted RBP9.56□□□□□ -0.88
RAB11FIP4-207ENST00000581460 C8orf17Q9NRJ1 99 aa9.56□□□□□ -0.88
RAB11FIP4-207ENST00000581460 A0A1B0GW54 56 aa9.55□□□□□ -0.88
RAB11FIP4-207ENST00000581460 SSPOA2VEC9 5147 aa9.52□□□□□ -0.88
RAB11FIP4-207ENST00000581460 C14orf132Q9NPU4 83 aa9.52□□□□□ -0.89
RAB11FIP4-207ENST00000581460 IGKV3D-7A0A0C4DH55 119 aa9.51□□□□□ -0.89
RAB11FIP4-207ENST00000581460 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.5□□□□□ -0.89
RAB11FIP4-207ENST00000581460 WFDC13Q8IUB5 93 aa9.5□□□□□ -0.89
RAB11FIP4-207ENST00000581460 Q6ZVQ6 151 aa9.49□□□□□ -0.89
RAB11FIP4-207ENST00000581460 NREPQ16612 68 aa9.48□□□□□ -0.89
RAB11FIP4-207ENST00000581460 KRTAP9-3Q9BYQ3 159 aa9.48□□□□□ -0.89
RAB11FIP4-207ENST00000581460 LCE2BO14633 110 aa9.47□□□□□ -0.89
RAB11FIP4-207ENST00000581460 PRR15Q8IV56 129 aa9.45□□□□□ -0.9
RAB11FIP4-207ENST00000581460 KRTAP9-7A8MTY7 169 aa9.44□□□□□ -0.9
RAB11FIP4-207ENST00000581460 BATFQ16520 125 aa9.41□□□□□ -0.9
RAB11FIP4-207ENST00000581460 KRTAP19-1Q8IUB9 90 aa9.4□□□□□ -0.9
RAB11FIP4-207ENST00000581460 TMEM254Q8TBM7 123 aa9.4□□□□□ -0.9
RAB11FIP4-207ENST00000581460 MRPL34Q9BQ48 92 aaKnown RBP9.4□□□□□ -0.9
RAB11FIP4-207ENST00000581460 SMIM6P0DI80 62 aa9.39□□□□□ -0.91
RAB11FIP4-207ENST00000581460 FCGBPQ9Y6R7 5405 aaPredicted RBP9.38□□□□□ -0.91
RAB11FIP4-207ENST00000581460 MMP24-AS1A0A0U1RRL7 71 aa9.38□□□□□ -0.91
RAB11FIP4-207ENST00000581460 NDUFS5O43920 106 aa9.38□□□□□ -0.91
RAB11FIP4-207ENST00000581460 hDV103S1A0JD37 113 aa9.35□□□□□ -0.91
RAB11FIP4-207ENST00000581460 TSTD3H0UI37 97 aa9.35□□□□□ -0.91
RAB11FIP4-207ENST00000581460 K7EQZ3 153 aa9.34□□□□□ -0.91
RAB11FIP4-207ENST00000581460 H3BT86 120 aa9.32□□□□□ -0.92
RAB11FIP4-207ENST00000581460 LINC00846Q9NV44 126 aa9.3□□□□□ -0.92
RAB11FIP4-207ENST00000581460 BPY2O14599 106 aa9.29□□□□□ -0.92
RAB11FIP4-207ENST00000581460 H1FX-AS1Q4G0G2 97 aa9.28□□□□□ -0.92
RAB11FIP4-207ENST00000581460 IGKV2D-30A0A075B6S6 120 aa9.27□□□□□ -0.93
RAB11FIP4-207ENST00000581460 C9orf118A6NHY6 69 aa9.27□□□□□ -0.93
RAB11FIP4-207ENST00000581460 IGKV2-30P06310 120 aa9.27□□□□□ -0.93
RAB11FIP4-207ENST00000581460 A0A1W2PPM0 123 aa9.24□□□□□ -0.93
RAB11FIP4-207ENST00000581460 C7orf65Q6ZTY9 151 aa9.23□□□□□ -0.93
RAB11FIP4-207ENST00000581460 TAX1BP3O14907 124 aa9.21□□□□□ -0.94
RAB11FIP4-207ENST00000581460 CASC2Q6XLA1 102 aa9.19□□□□□ -0.94
RAB11FIP4-207ENST00000581460 KRTAP19-6Q3LI70 58 aa9.18□□□□□ -0.94
RAB11FIP4-207ENST00000581460 Q5W150 140 aa9.18□□□□□ -0.94
RAB11FIP4-207ENST00000581460 Q8N9L7 120 aa9.18□□□□□ -0.94
RAB11FIP4-207ENST00000581460 HCG22E2RYF7 251 aa9.16□□□□□ -0.94
RAB11FIP4-207ENST00000581460 MACF1Q9UPN3 7388 aaKnown RBP9.14□□□□□ -0.95
RAB11FIP4-207ENST00000581460 SPCS1Q9Y6A9 102 aa9.13□□□□□ -0.95
RAB11FIP4-207ENST00000581460 CXCL6P80162 114 aa9.1□□□□□ -0.95
RAB11FIP4-207ENST00000581460 C4orf26Q17RF5 130 aa9.09□□□□□ -0.95
RAB11FIP4-207ENST00000581460 SYNE2Q8WXH0 6885 aaKnown RBP9.07□□□□□ -0.96
RAB11FIP4-207ENST00000581460 UBL5Q9BZL1 73 aa9.06□□□□□ -0.96
RAB11FIP4-207ENST00000581460 SMCPP49901 116 aaPredicted RBP9.03□□□□□ -0.96
RAB11FIP4-207ENST00000581460 LOC105371267A0A1B0GV96 52 aa9.02□□□□□ -0.97
RAB11FIP4-207ENST00000581460 C5orf47Q569G3 176 aa8.99□□□□□ -0.97
RAB11FIP4-207ENST00000581460 FAM236AA0A1B0GUQ0 79 aa8.97□□□□□ -0.97
RAB11FIP4-207ENST00000581460 FAM236BA0A1B0GV22 79 aa8.97□□□□□ -0.97
RAB11FIP4-207ENST00000581460 COL5A1-AS1Q5SY13 56 aa8.95□□□□□ -0.98
RAB11FIP4-207ENST00000581460 S4R3F8 94 aa8.94□□□□□ -0.98
RAB11FIP4-207ENST00000581460 PRO0461Q9UI25 63 aa8.93□□□□□ -0.98
RAB11FIP4-207ENST00000581460 K7EP34 96 aa8.91□□□□□ -0.98
RAB11FIP4-207ENST00000581460 C1orf64Q8NEQ6 169 aa8.91□□□□□ -0.98
RAB11FIP4-207ENST00000581460 CSAG1Q6PB30 78 aa8.89□□□□□ -0.99
RAB11FIP4-207ENST00000581460 KRTAP3-1Q9BYR8 98 aa8.89□□□□□ -0.99
RAB11FIP4-207ENST00000581460 TP53AIP1Q9HCN2 124 aa8.88□□□□□ -0.99
RAB11FIP4-207ENST00000581460 LCA10Q71F78 164 aa8.84□□□□□ -0.99
RAB11FIP4-207ENST00000581460 KRTAP6-3Q3LI67 103 aa8.83□□□□□ -1
RAB11FIP4-207ENST00000581460 GTF2H5Q6ZYL4 71 aa8.81□□□□□ -1
RAB11FIP4-207ENST00000581460 Q5VV11 94 aa8.79□□□□□ -1
RAB11FIP4-207ENST00000581460 A6NN06 94 aa8.77□□□□□ -1.01
RAB11FIP4-207ENST00000581460 F8W1H4 67 aa8.74□□□□□ -1.01
RAB11FIP4-207ENST00000581460 ETDBQ3ZM63 59 aa8.74□□□□□ -1.01
RAB11FIP4-207ENST00000581460 MT1BP07438 61 aa8.73□□□□□ -1.01
RAB11FIP4-207ENST00000581460 SPRR2GQ9BYE4 73 aa8.73□□□□□ -1.01
RAB11FIP4-207ENST00000581460 KLKP1Q107X0 134 aa8.7□□□□□ -1.02
RAB11FIP4-207ENST00000581460 CYP4F30PQ9H0H9 118 aa8.7□□□□□ -1.02
RAB11FIP4-207ENST00000581460 KRTAP19-8Q3LI54 63 aa8.69□□□□□ -1.02
RAB11FIP4-207ENST00000581460 TRAV22A0A0B4J277 110 aa8.67□□□□□ -1.02
RAB11FIP4-207ENST00000581460 LOC101927531A0A1B0GV80 90 aa8.65□□□□□ -1.02
RAB11FIP4-207ENST00000581460 KRTAP3-3Q9BYR6 98 aa8.64□□□□□ -1.03
RAB11FIP4-207ENST00000581460 PCP4L1A6NKN8 68 aa8.6□□□□□ -1.03
RAB11FIP4-207ENST00000581460 A0A087WVE0 104 aa8.58□□□□□ -1.04
RAB11FIP4-207ENST00000581460 KRTAP10-5P60370 271 aa8.58□□□□□ -1.04
RAB11FIP4-207ENST00000581460 CRIPTQ9P021 101 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 206.1 ms