RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 PYY3Q5JQD4 70 aa4.65□□□□□ -1.67
RFFL-208ENST00000581039 LYRM7Q5U5X0 104 aa4.65□□□□□ -1.67
RFFL-208ENST00000581039 DNAL4O96015 105 aa4.64□□□□□ -1.67
RFFL-208ENST00000581039 COX8AP10176 69 aa4.64□□□□□ -1.67
RFFL-208ENST00000581039 HIST1H2BLQ99880 126 aa4.64□□□□□ -1.67
RFFL-208ENST00000581039 ORMDL1Q9P0S3 153 aa4.64□□□□□ -1.67
RFFL-208ENST00000581039 TMEM256-PLSCR3K7ERE1 68 aa4.63□□□□□ -1.67
RFFL-208ENST00000581039 PRO1854Q9UHT4 67 aa4.63□□□□□ -1.67
RFFL-208ENST00000581039 DLEU1O43261 78 aa4.62□□□□□ -1.67
RFFL-208ENST00000581039 VPS25Q9BRG1 176 aa4.62□□□□□ -1.67
RFFL-208ENST00000581039 A6NN06 94 aa4.61□□□□□ -1.67
RFFL-208ENST00000581039 J3KT08 172 aa4.61□□□□□ -1.67
RFFL-208ENST00000581039 H1FX-AS1Q4G0G2 97 aa4.61□□□□□ -1.67
RFFL-208ENST00000581039 TRIAP1O43715 76 aa4.6□□□□□ -1.67
RFFL-208ENST00000581039 NDUFB1O75438 58 aa4.6□□□□□ -1.67
RFFL-208ENST00000581039 HIGD1BQ9P298 99 aa4.6□□□□□ -1.67
RFFL-208ENST00000581039 TSTD3H0UI37 97 aa4.59□□□□□ -1.67
RFFL-208ENST00000581039 C14orf144Q96I85 54 aa4.59□□□□□ -1.67
RFFL-208ENST00000581039 DSCR8Q96T75 97 aa4.59□□□□□ -1.67
RFFL-208ENST00000581039 IGKV3D-7A0A0C4DH55 119 aa4.57□□□□□ -1.68
RFFL-208ENST00000581039 TMEM238LA0A1B0GVL6 79 aa4.57□□□□□ -1.68
RFFL-208ENST00000581039 A6NJY4 79 aa4.57□□□□□ -1.68
RFFL-208ENST00000581039 UBE2V1Q13404 147 aa4.57□□□□□ -1.68
RFFL-208ENST00000581039 CEND1Q8N111 149 aa4.57□□□□□ -1.68
RFFL-208ENST00000581039 PSMB2P49721 201 aa4.56□□□□□ -1.68
RFFL-208ENST00000581039 RBM3P98179 157 aaKnown RBP4.56□□□□□ -1.68
RFFL-208ENST00000581039 C21orf62-AS1Q17RA5 79 aa4.56□□□□□ -1.68
RFFL-208ENST00000581039 C8orf17Q9NRJ1 99 aa4.56□□□□□ -1.68
RFFL-208ENST00000581039 COX6CP09669 75 aa4.55□□□□□ -1.68
RFFL-208ENST00000581039 A0A1B0GV90 55 aa4.53□□□□□ -1.68
RFFL-208ENST00000581039 Q6ZQT0 140 aa4.53□□□□□ -1.68
RFFL-208ENST00000581039 C2orf91Q6ZV80 131 aa4.53□□□□□ -1.68
RFFL-208ENST00000581039 Q6ZVQ6 151 aa4.53□□□□□ -1.68
RFFL-208ENST00000581039 C9JAW5 83 aa4.52□□□□□ -1.69
RFFL-208ENST00000581039 FXYD2P54710 66 aa4.52□□□□□ -1.69
RFFL-208ENST00000581039 SPATA45Q537H7 98 aa4.52□□□□□ -1.69
RFFL-208ENST00000581039 Q5VV11 94 aa4.52□□□□□ -1.69
RFFL-208ENST00000581039 PAM16Q9Y3D7 125 aa4.52□□□□□ -1.69
RFFL-208ENST00000581039 KRTAP5-9P26371 169 aa4.51□□□□□ -1.69
RFFL-208ENST00000581039 VAMP8Q9BV40 100 aa4.51□□□□□ -1.69
RFFL-208ENST00000581039 KMT2DO14686 5537 aa4.51□□□□□ -1.69
RFFL-208ENST00000581039 FAM236AA0A1B0GUQ0 79 aa4.5□□□□□ -1.69
RFFL-208ENST00000581039 FAM236BA0A1B0GV22 79 aa4.5□□□□□ -1.69
RFFL-208ENST00000581039 MT1BP07438 61 aa4.5□□□□□ -1.69
RFFL-208ENST00000581039 MDN1Q9NU22 5596 aa4.5□□□□□ -1.69
RFFL-208ENST00000581039 KRTAP2-3P0C7H8 128 aa4.48□□□□□ -1.69
RFFL-208ENST00000581039 KRTAP2-4Q9BYR9 128 aa4.48□□□□□ -1.69
RFFL-208ENST00000581039 K7ERJ3 54 aa4.47□□□□□ -1.69
RFFL-208ENST00000581039 M0R143 59 aa4.47□□□□□ -1.69
RFFL-208ENST00000581039 KRTAP10-5P60370 271 aa4.47□□□□□ -1.69
RFFL-208ENST00000581039 BATFQ16520 125 aa4.47□□□□□ -1.69
RFFL-208ENST00000581039 MRPL34Q9BQ48 92 aaKnown RBP4.47□□□□□ -1.69
RFFL-208ENST00000581039 IGKV2D-30A0A075B6S6 120 aa4.46□□□□□ -1.7
RFFL-208ENST00000581039 NDUFS5O43920 106 aa4.46□□□□□ -1.7
RFFL-208ENST00000581039 IGKV2-30P06310 120 aa4.46□□□□□ -1.7
RFFL-208ENST00000581039 SCGB1C2P0DMR2 95 aa4.46□□□□□ -1.7
RFFL-208ENST00000581039 KRTAP19-8Q3LI54 63 aa4.46□□□□□ -1.7
RFFL-208ENST00000581039 PRR15Q8IV56 129 aa4.46□□□□□ -1.7
RFFL-208ENST00000581039 TMEM254Q8TBM7 123 aa4.46□□□□□ -1.7
RFFL-208ENST00000581039 A0A1B0GW54 56 aa4.45□□□□□ -1.7
RFFL-208ENST00000581039 BAALC-AS2P0C853 105 aa4.45□□□□□ -1.7
RFFL-208ENST00000581039 C5orf47Q569G3 176 aa4.45□□□□□ -1.7
RFFL-208ENST00000581039 SPRR2GQ9BYE4 73 aa4.44□□□□□ -1.7
RFFL-208ENST00000581039 UQCR10Q9UDW1 63 aa4.44□□□□□ -1.7
RFFL-208ENST00000581039 GPR98Q8WXG9 6306 aa4.43□□□□□ -1.7
RFFL-208ENST00000581039 HSD52Q0P140 79 aa4.43□□□□□ -1.7
RFFL-208ENST00000581039 C7orf65Q6ZTY9 151 aa4.43□□□□□ -1.7
RFFL-208ENST00000581039 MMP24-AS1A0A0U1RRL7 71 aa4.42□□□□□ -1.7
RFFL-208ENST00000581039 hDV103S1A0JD37 113 aa4.42□□□□□ -1.7
RFFL-208ENST00000581039 C4orf26Q17RF5 130 aa4.42□□□□□ -1.7
RFFL-208ENST00000581039 NREPQ16612 68 aa4.41□□□□□ -1.7
RFFL-208ENST00000581039 COL5A1-AS1Q5SY13 56 aa4.41□□□□□ -1.7
RFFL-208ENST00000581039 LOC110117498A0A087WWA1 95 aa4.4□□□□□ -1.71
RFFL-208ENST00000581039 JMJD7-PLA2G4BH0Y9G9 81 aa4.4□□□□□ -1.71
RFFL-208ENST00000581039 PDE6GP18545 87 aa4.4□□□□□ -1.71
RFFL-208ENST00000581039 Q5W150 140 aa4.4□□□□□ -1.71
RFFL-208ENST00000581039 CSAG1Q6PB30 78 aa4.4□□□□□ -1.71
RFFL-208ENST00000581039 IMUPQ9GZP8 106 aa4.39□□□□□ -1.71
RFFL-208ENST00000581039 S4R3F8 94 aa4.37□□□□□ -1.71
RFFL-208ENST00000581039 K7EQZ3 153 aa4.36□□□□□ -1.71
RFFL-208ENST00000581039 KLKP1Q107X0 134 aa4.35□□□□□ -1.71
RFFL-208ENST00000581039 C14orf132Q9NPU4 83 aa4.35□□□□□ -1.71
RFFL-208ENST00000581039 SPRR2EP22531 72 aa4.34□□□□□ -1.71
RFFL-208ENST00000581039 SPRR2BP35325 72 aa4.34□□□□□ -1.71
RFFL-208ENST00000581039 SPRR2AP35326 72 aa4.34□□□□□ -1.71
RFFL-208ENST00000581039 ATXN8Q156A1 80 aa4.34□□□□□ -1.71
RFFL-208ENST00000581039 SPRR2FQ96RM1 72 aa4.34□□□□□ -1.71
RFFL-208ENST00000581039 TAX1BP3O14907 124 aa4.32□□□□□ -1.72
RFFL-208ENST00000581039 LCA10Q71F78 164 aa4.32□□□□□ -1.72
RFFL-208ENST00000581039 KRTAP3-1Q9BYR8 98 aa4.32□□□□□ -1.72
RFFL-208ENST00000581039 KRTAP2-2Q9BYT5 123 aa4.32□□□□□ -1.72
RFFL-208ENST00000581039 KRTAP2-1Q9BYU5 128 aa4.32□□□□□ -1.72
RFFL-208ENST00000581039 HCG22E2RYF7 251 aa4.31□□□□□ -1.72
RFFL-208ENST00000581039 BPY2O14599 106 aa4.3□□□□□ -1.72
RFFL-208ENST00000581039 C1orf64Q8NEQ6 169 aa4.3□□□□□ -1.72
RFFL-208ENST00000581039 SMCPP49901 116 aaPredicted RBP4.29□□□□□ -1.72
RFFL-208ENST00000581039 CXCL6P80162 114 aa4.29□□□□□ -1.72
RFFL-208ENST00000581039 CASC2Q6XLA1 102 aa4.29□□□□□ -1.72
RFFL-208ENST00000581039 CRIPTQ9P021 101 aa4.29□□□□□ -1.72
RFFL-208ENST00000581039 NAA38Q9BRA0 125 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 853.7 ms