RNA–Protein interactions for RNA: ENST00000580949.1

PTPRM-213, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-213ENST00000580949 Q6Q795 121 aa3.65□□□□□ -1.83
PTPRM-213ENST00000580949 A0A087WSZ3 146 aa3.64□□□□□ -1.83
PTPRM-213ENST00000580949 FAM229BQ4G0N7 80 aa3.64□□□□□ -1.83
PTPRM-213ENST00000580949 SPINK6Q6UWN8 80 aa3.64□□□□□ -1.83
PTPRM-213ENST00000580949 HRCT1Q6UXD1 115 aa3.64□□□□□ -1.83
PTPRM-213ENST00000580949 IMUPQ9GZP8 106 aa3.64□□□□□ -1.83
PTPRM-213ENST00000580949 SCGB1A1P11684 91 aa3.63□□□□□ -1.83
PTPRM-213ENST00000580949 ATP5EP2Q5VTU8 51 aa3.63□□□□□ -1.83
PTPRM-213ENST00000580949 EPPK1P58107 5090 aaKnown RBP3.63□□□□□ -1.83
PTPRM-213ENST00000580949 A0A087WVE0 104 aa3.62□□□□□ -1.83
PTPRM-213ENST00000580949 DSCR10P59022 87 aa3.62□□□□□ -1.83
PTPRM-213ENST00000580949 CXCL6P80162 114 aa3.62□□□□□ -1.83
PTPRM-213ENST00000580949 DEFB116Q30KQ4 102 aa3.62□□□□□ -1.83
PTPRM-213ENST00000580949 SSBP3-AS1Q7Z2R9 100 aa3.62□□□□□ -1.83
PTPRM-213ENST00000580949 Q8N9L7 120 aa3.62□□□□□ -1.83
PTPRM-213ENST00000580949 LINC00472Q9H8W2 130 aa3.62□□□□□ -1.83
PTPRM-213ENST00000580949 HSPG2P98160 4391 aa3.62□□□□□ -1.83
PTPRM-213ENST00000580949 KIAA1109Q2LD37 5005 aa3.62□□□□□ -1.83
PTPRM-213ENST00000580949 BPY2O14599 106 aa3.61□□□□□ -1.83
PTPRM-213ENST00000580949 HIST1H4AP62805 103 aaKnown RBP3.61□□□□□ -1.83
PTPRM-213ENST00000580949 IGKV4-1P06312 121 aa3.6□□□□□ -1.83
PTPRM-213ENST00000580949 CD164Q04900 197 aa3.6□□□□□ -1.83
PTPRM-213ENST00000580949 PRAC1Q96KF2 57 aa3.6□□□□□ -1.83
PTPRM-213ENST00000580949 Q96NJ1 140 aa3.6□□□□□ -1.83
PTPRM-213ENST00000580949 FAM236AA0A1B0GUQ0 79 aa3.59□□□□□ -1.83
PTPRM-213ENST00000580949 FAM236BA0A1B0GV22 79 aa3.59□□□□□ -1.83
PTPRM-213ENST00000580949 KRTAP10-6P60371 365 aaPredicted RBP3.59□□□□□ -1.83
PTPRM-213ENST00000580949 Q5VSD8 79 aa3.58□□□□□ -1.84
PTPRM-213ENST00000580949 K7EQZ3 153 aa3.57□□□□□ -1.84
PTPRM-213ENST00000580949 TYMSOSQ8TAI1 123 aa3.57□□□□□ -1.84
PTPRM-213ENST00000580949 PKHD1L1Q86WI1 4243 aa3.56□□□□□ -1.84
PTPRM-213ENST00000580949 SEC61GP60059 68 aa3.56□□□□□ -1.84
PTPRM-213ENST00000580949 A8MWP4 228 aa3.55□□□□□ -1.84
PTPRM-213ENST00000580949 ASB16-AS1Q495Z4 193 aa3.55□□□□□ -1.84
PTPRM-213ENST00000580949 C1orf195Q5TG92 126 aa3.55□□□□□ -1.84
PTPRM-213ENST00000580949 Q5XG85 94 aa3.55□□□□□ -1.84
PTPRM-213ENST00000580949 PRR15Q8IV56 129 aa3.55□□□□□ -1.84
PTPRM-213ENST00000580949 ANAPC13Q9BS18 74 aa3.55□□□□□ -1.84
PTPRM-213ENST00000580949 SS18L2Q9UHA2 77 aa3.55□□□□□ -1.84
PTPRM-213ENST00000580949 J3KT08 172 aa3.54□□□□□ -1.84
PTPRM-213ENST00000580949 LRP1Q07954 4544 aaKnown RBP3.53□□□□□ -1.84
PTPRM-213ENST00000580949 SPINK1P00995 79 aa3.53□□□□□ -1.84
PTPRM-213ENST00000580949 KRTAP10-8P60410 259 aa3.53□□□□□ -1.84
PTPRM-213ENST00000580949 NOTCH2NLQ7Z3S9 236 aa3.53□□□□□ -1.84
PTPRM-213ENST00000580949 LINC00304Q8N9R0 145 aa3.53□□□□□ -1.84
PTPRM-213ENST00000580949 BIRC6Q9NR09 4857 aa3.53□□□□□ -1.84
PTPRM-213ENST00000580949 FLG2Q5D862 2391 aaPredicted RBP3.52□□□□□ -1.85
PTPRM-213ENST00000580949 ATOX1O00244 68 aa3.52□□□□□ -1.85
PTPRM-213ENST00000580949 IGHV6-1A0A0B4J1U7 121 aa3.51□□□□□ -1.85
PTPRM-213ENST00000580949 MMP24-AS1A0A0U1RRL7 71 aa3.51□□□□□ -1.85
PTPRM-213ENST00000580949 A0A1B0GVX0 72 aa3.51□□□□□ -1.85
PTPRM-213ENST00000580949 HCG22E2RYF7 251 aa3.51□□□□□ -1.85
PTPRM-213ENST00000580949 CCDC179H3BU77 68 aa3.51□□□□□ -1.85
PTPRM-213ENST00000580949 KRTAP10-7P60409 375 aaPredicted RBP3.51□□□□□ -1.85
PTPRM-213ENST00000580949 SPAG11AQ6PDA7 123 aa3.51□□□□□ -1.85
PTPRM-213ENST00000580949 WFDC13Q8IUB5 93 aa3.51□□□□□ -1.85
PTPRM-213ENST00000580949 FAT3Q8TDW7 4589 aa3.5□□□□□ -1.85
PTPRM-213ENST00000580949 NDUFB1O75438 58 aa3.5□□□□□ -1.85
PTPRM-213ENST00000580949 RPS29P62273 56 aaKnown RBP3.5□□□□□ -1.85
PTPRM-213ENST00000580949 SERP2Q8N6R1 65 aa3.5□□□□□ -1.85
PTPRM-213ENST00000580949 LIMD2Q9BT23 127 aa3.5□□□□□ -1.85
PTPRM-213ENST00000580949 OCR1Q9BZK8 76 aa3.5□□□□□ -1.85
PTPRM-213ENST00000580949 C8orf17Q9NRJ1 99 aa3.5□□□□□ -1.85
PTPRM-213ENST00000580949 HERC2O95714 4834 aa3.5□□□□□ -1.85
PTPRM-213ENST00000580949 TRAV7A0A075B6U4 112 aa3.49□□□□□ -1.85
PTPRM-213ENST00000580949 MT1HL1P0DM35 61 aa3.49□□□□□ -1.85
PTPRM-213ENST00000580949 CASC2Q6XLA1 102 aa3.49□□□□□ -1.85
PTPRM-213ENST00000580949 COX7CP15954 63 aa3.48□□□□□ -1.85
PTPRM-213ENST00000580949 TNXBP22105 4242 aa3.48□□□□□ -1.85
PTPRM-213ENST00000580949 MYCBP2O75592 4640 aa3.47□□□□□ -1.85
PTPRM-213ENST00000580949 hDV103S1A0JD37 113 aa3.47□□□□□ -1.85
PTPRM-213ENST00000580949 UQCRQO14949 82 aa3.47□□□□□ -1.85
PTPRM-213ENST00000580949 SMIM20Q8N5G0 67 aa3.47□□□□□ -1.85
PTPRM-213ENST00000580949 RETNLBQ9BQ08 111 aa3.46□□□□□ -1.86
PTPRM-213ENST00000580949 CYSTM1Q9H1C7 97 aa3.46□□□□□ -1.86
PTPRM-213ENST00000580949 ABCA13Q86UQ4 5058 aa3.46□□□□□ -1.86
PTPRM-213ENST00000580949 DMBT1Q9UGM3 2413 aaPredicted RBP3.45□□□□□ -1.86
PTPRM-213ENST00000580949 KRTAP16-1A8MUX0 517 aa3.45□□□□□ -1.86
PTPRM-213ENST00000580949 TMEM254Q8TBM7 123 aa3.45□□□□□ -1.86
PTPRM-213ENST00000580949 C8orf87E5RJ46 101 aa3.44□□□□□ -1.86
PTPRM-213ENST00000580949 LINC00313P59037 77 aa3.44□□□□□ -1.86
PTPRM-213ENST00000580949 MRPL34Q9BQ48 92 aaKnown RBP3.44□□□□□ -1.86
PTPRM-213ENST00000580949 LCE1EQ5T753 118 aa3.43□□□□□ -1.86
PTPRM-213ENST00000580949 C20orf197Q8N268 126 aa3.43□□□□□ -1.86
PTPRM-213ENST00000580949 A0A0U1RQV1 116 aa3.42□□□□□ -1.86
PTPRM-213ENST00000580949 OXTP01178 125 aa3.42□□□□□ -1.86
PTPRM-213ENST00000580949 Q5W150 140 aa3.42□□□□□ -1.86
PTPRM-213ENST00000580949 SNURFQ9Y675 71 aa3.42□□□□□ -1.86
PTPRM-213ENST00000580949 IGLV7-46A0A075B6I9 117 aa3.41□□□□□ -1.86
PTPRM-213ENST00000580949 KRTAP13-3Q3SY46 172 aa3.41□□□□□ -1.86
PTPRM-213ENST00000580949 C5orf47Q569G3 176 aa3.41□□□□□ -1.86
PTPRM-213ENST00000580949 C9orf92A6NGG3 77 aa3.4□□□□□ -1.87
PTPRM-213ENST00000580949 NDUFS5O43920 106 aa3.4□□□□□ -1.87
PTPRM-213ENST00000580949 KLKP1Q107X0 134 aa3.4□□□□□ -1.87
PTPRM-213ENST00000580949 ZCCHC13Q8WW36 166 aaKnown RBP3.4□□□□□ -1.87
PTPRM-213ENST00000580949 H0Y9P7 68 aa3.39□□□□□ -1.87
PTPRM-213ENST00000580949 TP53AIP1Q9HCN2 124 aa3.39□□□□□ -1.87
PTPRM-213ENST00000580949 H7BZZ5 65 aa3.38□□□□□ -1.87
PTPRM-213ENST00000580949 LINC00208Q96KT6 92 aa3.38□□□□□ -1.87
PTPRM-213ENST00000580949 TRAV22A0A0B4J277 110 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms