RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 TRIAP1O43715 76 aa8.75□□□□□ -1.01
NDEL1-209ENST00000580738 HIST3H2BBQ8N257 126 aa8.75□□□□□ -1.01
NDEL1-209ENST00000580738 MT1BP07438 61 aa8.74□□□□□ -1.01
NDEL1-209ENST00000580738 VPS25Q9BRG1 176 aa8.74□□□□□ -1.01
NDEL1-209ENST00000580738 PRO1854Q9UHT4 67 aa8.73□□□□□ -1.01
NDEL1-209ENST00000580738 DLEU1O43261 78 aa8.72□□□□□ -1.01
NDEL1-209ENST00000580738 DNAL4O96015 105 aa8.72□□□□□ -1.01
NDEL1-209ENST00000580738 TMEM256-PLSCR3K7ERE1 68 aa8.7□□□□□ -1.02
NDEL1-209ENST00000580738 S100A2P29034 98 aa8.7□□□□□ -1.02
NDEL1-209ENST00000580738 H3BQ85 93 aa8.69□□□□□ -1.02
NDEL1-209ENST00000580738 J3KT08 172 aa8.69□□□□□ -1.02
NDEL1-209ENST00000580738 C14orf144Q96I85 54 aa8.69□□□□□ -1.02
NDEL1-209ENST00000580738 IGKV3D-7A0A0C4DH55 119 aa8.67□□□□□ -1.02
NDEL1-209ENST00000580738 C8orf17Q9NRJ1 99 aa8.67□□□□□ -1.02
NDEL1-209ENST00000580738 HIGD1BQ9P298 99 aa8.67□□□□□ -1.02
NDEL1-209ENST00000580738 NDUFB1O75438 58 aa8.65□□□□□ -1.02
NDEL1-209ENST00000580738 KRTAP10-5P60370 271 aa8.64□□□□□ -1.03
NDEL1-209ENST00000580738 Q5VV11 94 aa8.64□□□□□ -1.03
NDEL1-209ENST00000580738 C2orf91Q6ZV80 131 aa8.64□□□□□ -1.03
NDEL1-209ENST00000580738 CEND1Q8N111 149 aa8.64□□□□□ -1.03
NDEL1-209ENST00000580738 KRTAP2-3P0C7H8 128 aa8.63□□□□□ -1.03
NDEL1-209ENST00000580738 UBE2V1Q13404 147 aa8.63□□□□□ -1.03
NDEL1-209ENST00000580738 DSCR8Q96T75 97 aa8.63□□□□□ -1.03
NDEL1-209ENST00000580738 KRTAP2-4Q9BYR9 128 aa8.63□□□□□ -1.03
NDEL1-209ENST00000580738 FXYD2P54710 66 aa8.6□□□□□ -1.03
NDEL1-209ENST00000580738 RBM3P98179 157 aaKnown RBP8.6□□□□□ -1.03
NDEL1-209ENST00000580738 Q6ZQT0 140 aa8.6□□□□□ -1.03
NDEL1-209ENST00000580738 Q6ZVQ6 151 aa8.6□□□□□ -1.03
NDEL1-209ENST00000580738 KRTAP19-8Q3LI54 63 aa8.59□□□□□ -1.03
NDEL1-209ENST00000580738 TMEM238LA0A1B0GVL6 79 aa8.58□□□□□ -1.04
NDEL1-209ENST00000580738 A6NJY4 79 aa8.58□□□□□ -1.04
NDEL1-209ENST00000580738 PSMB2P49721 201 aa8.57□□□□□ -1.04
NDEL1-209ENST00000580738 FAM236AA0A1B0GUQ0 79 aa8.56□□□□□ -1.04
NDEL1-209ENST00000580738 FAM236BA0A1B0GV22 79 aa8.56□□□□□ -1.04
NDEL1-209ENST00000580738 SPRR2GQ9BYE4 73 aa8.54□□□□□ -1.04
NDEL1-209ENST00000580738 PAM16Q9Y3D7 125 aa8.54□□□□□ -1.04
NDEL1-209ENST00000580738 C21orf62-AS1Q17RA5 79 aa8.52□□□□□ -1.05
NDEL1-209ENST00000580738 SPATA45Q537H7 98 aa8.52□□□□□ -1.05
NDEL1-209ENST00000580738 C9JAW5 83 aa8.51□□□□□ -1.05
NDEL1-209ENST00000580738 K7ERJ3 54 aa8.51□□□□□ -1.05
NDEL1-209ENST00000580738 COX6CP09669 75 aa8.51□□□□□ -1.05
NDEL1-209ENST00000580738 C5orf47Q569G3 176 aa8.51□□□□□ -1.05
NDEL1-209ENST00000580738 IGKV2D-30A0A075B6S6 120 aa8.49□□□□□ -1.05
NDEL1-209ENST00000580738 IGKV2-30P06310 120 aa8.49□□□□□ -1.05
NDEL1-209ENST00000580738 S100A6P06703 90 aa8.47□□□□□ -1.05
NDEL1-209ENST00000580738 MRPL34Q9BQ48 92 aaKnown RBP8.47□□□□□ -1.05
NDEL1-209ENST00000580738 PRR15Q8IV56 129 aa8.46□□□□□ -1.06
NDEL1-209ENST00000580738 MMP24-AS1A0A0U1RRL7 71 aa8.45□□□□□ -1.06
NDEL1-209ENST00000580738 TMEM254Q8TBM7 123 aa8.45□□□□□ -1.06
NDEL1-209ENST00000580738 C4orf26Q17RF5 130 aa8.43□□□□□ -1.06
NDEL1-209ENST00000580738 NDUFS5O43920 106 aa8.42□□□□□ -1.06
NDEL1-209ENST00000580738 C7orf65Q6ZTY9 151 aa8.42□□□□□ -1.06
NDEL1-209ENST00000580738 Q5W150 140 aa8.41□□□□□ -1.06
NDEL1-209ENST00000580738 VAMP8Q9BV40 100 aa8.41□□□□□ -1.06
NDEL1-209ENST00000580738 BAALC-AS2P0C853 105 aa8.4□□□□□ -1.06
NDEL1-209ENST00000580738 SPRR2EP22531 72 aa8.39□□□□□ -1.07
NDEL1-209ENST00000580738 SPRR2BP35325 72 aa8.39□□□□□ -1.07
NDEL1-209ENST00000580738 SPRR2AP35326 72 aa8.39□□□□□ -1.07
NDEL1-209ENST00000580738 hDV103S1A0JD37 113 aa8.37□□□□□ -1.07
NDEL1-209ENST00000580738 SPRR2FQ96RM1 72 aa8.37□□□□□ -1.07
NDEL1-209ENST00000580738 SCGB1C2P0DMR2 95 aa8.35□□□□□ -1.07
NDEL1-209ENST00000580738 IMUPQ9GZP8 106 aa8.35□□□□□ -1.07
NDEL1-209ENST00000580738 A0A1B0GW54 56 aa8.34□□□□□ -1.07
NDEL1-209ENST00000580738 HSD52Q0P140 79 aa8.34□□□□□ -1.07
NDEL1-209ENST00000580738 LOC110117498A0A087WWA1 95 aa8.32□□□□□ -1.08
NDEL1-209ENST00000580738 S100A1P23297 94 aa8.32□□□□□ -1.08
NDEL1-209ENST00000580738 CSAG1Q6PB30 78 aa8.32□□□□□ -1.08
NDEL1-209ENST00000580738 KRTAP2-2Q9BYT5 123 aa8.32□□□□□ -1.08
NDEL1-209ENST00000580738 KRTAP2-1Q9BYU5 128 aa8.32□□□□□ -1.08
NDEL1-209ENST00000580738 KRTAP3-1Q9BYR8 98 aa8.31□□□□□ -1.08
NDEL1-209ENST00000580738 K7EQZ3 153 aa8.3□□□□□ -1.08
NDEL1-209ENST00000580738 KLKP1Q107X0 134 aa8.3□□□□□ -1.08
NDEL1-209ENST00000580738 NREPQ16612 68 aa8.3□□□□□ -1.08
NDEL1-209ENST00000580738 S4R3F8 94 aa8.3□□□□□ -1.08
NDEL1-209ENST00000580738 SMCPP49901 116 aaPredicted RBP8.28□□□□□ -1.08
NDEL1-209ENST00000580738 JMJD7-PLA2G4BH0Y9G9 81 aa8.27□□□□□ -1.09
NDEL1-209ENST00000580738 LCA10Q71F78 164 aa8.27□□□□□ -1.09
NDEL1-209ENST00000580738 C14orf132Q9NPU4 83 aa8.24□□□□□ -1.09
NDEL1-209ENST00000580738 PDE6GP18545 87 aa8.23□□□□□ -1.09
NDEL1-209ENST00000580738 LCE1AQ5T7P2 110 aa8.21□□□□□ -1.1
NDEL1-209ENST00000580738 HCG22E2RYF7 251 aa8.16□□□□□ -1.1
NDEL1-209ENST00000580738 C1orf64Q8NEQ6 169 aa8.16□□□□□ -1.1
NDEL1-209ENST00000580738 ATXN8Q156A1 80 aa8.15□□□□□ -1.1
NDEL1-209ENST00000580738 KRTAP8-1Q8IUC2 63 aa8.13□□□□□ -1.11
NDEL1-209ENST00000580738 CASC2Q6XLA1 102 aa8.12□□□□□ -1.11
NDEL1-209ENST00000580738 SPRR2DP22532 72 aa8.11□□□□□ -1.11
NDEL1-209ENST00000580738 KRTAP3-3Q9BYR6 98 aa8.11□□□□□ -1.11
NDEL1-209ENST00000580738 CRIPTQ9P021 101 aa8.11□□□□□ -1.11
NDEL1-209ENST00000580738 Q8N9L7 120 aa8.1□□□□□ -1.11
NDEL1-209ENST00000580738 CXCL6P80162 114 aa8.09□□□□□ -1.11
NDEL1-209ENST00000580738 BPY2O14599 106 aa8.08□□□□□ -1.12
NDEL1-209ENST00000580738 NAA38Q9BRA0 125 aaKnown RBP8.08□□□□□ -1.12
NDEL1-209ENST00000580738 PYY3Q5JQD4 70 aa8.05□□□□□ -1.12
NDEL1-209ENST00000580738 UQCR10Q9UDW1 63 aa8.05□□□□□ -1.12
NDEL1-209ENST00000580738 MT1XP80297 61 aa8.04□□□□□ -1.12
NDEL1-209ENST00000580738 PRO2289Q9P1D8 64 aa8.02□□□□□ -1.13
NDEL1-209ENST00000580738 A0A087WVE0 104 aa7.96□□□□□ -1.14
NDEL1-209ENST00000580738 GPR98Q8WXG9 6306 aa7.94□□□□□ -1.14
NDEL1-209ENST00000580738 LCE3BQ5TA77 95 aa7.94□□□□□ -1.14
NDEL1-209ENST00000580738 KRTAP4-8A0A0G2JLE6 195 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms