RNA–Protein interactions for RNA: ENST00000580569.1

RFFL-207, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene RFFL, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-207ENST00000580569 BPY2O14599 106 aa4.71□□□□□ -1.66
RFFL-207ENST00000580569 SERP2Q8N6R1 65 aa4.71□□□□□ -1.66
RFFL-207ENST00000580569 CIRBP-AS1Q8TBR5 109 aa4.71□□□□□ -1.66
RFFL-207ENST00000580569 IGLV7-43P04211 117 aa4.7□□□□□ -1.66
RFFL-207ENST00000580569 KRTAP10-4P60372 401 aaPredicted RBP4.7□□□□□ -1.66
RFFL-207ENST00000580569 RPL37AP61513 92 aaKnown RBP4.7□□□□□ -1.66
RFFL-207ENST00000580569 Q8N9L7 120 aa4.7□□□□□ -1.66
RFFL-207ENST00000580569 PRAC1Q96KF2 57 aa4.7□□□□□ -1.66
RFFL-207ENST00000580569 TRAV7A0A075B6U4 112 aa4.68□□□□□ -1.66
RFFL-207ENST00000580569 A0A087WSZ3 146 aa4.68□□□□□ -1.66
RFFL-207ENST00000580569 LINC00472Q9H8W2 130 aa4.68□□□□□ -1.66
RFFL-207ENST00000580569 ZNF706Q9Y5V0 76 aaPredicted RBP4.68□□□□□ -1.66
RFFL-207ENST00000580569 CYSTM1Q9H1C7 97 aa4.67□□□□□ -1.66
RFFL-207ENST00000580569 KRTAP9-6A0A140TA67 174 aa4.66□□□□□ -1.66
RFFL-207ENST00000580569 KRTAP9-7A8MTY7 169 aa4.66□□□□□ -1.66
RFFL-207ENST00000580569 C9orf153Q5TBE3 101 aa4.66□□□□□ -1.66
RFFL-207ENST00000580569 KRTAP19-1Q8IUB9 90 aa4.66□□□□□ -1.66
RFFL-207ENST00000580569 SMIM20Q8N5G0 67 aa4.66□□□□□ -1.66
RFFL-207ENST00000580569 K7EQZ3 153 aa4.65□□□□□ -1.67
RFFL-207ENST00000580569 Q96NJ1 140 aa4.65□□□□□ -1.67
RFFL-207ENST00000580569 OCR1Q9BZK8 76 aa4.65□□□□□ -1.67
RFFL-207ENST00000580569 ANAPC11Q9NYG5 84 aa4.64□□□□□ -1.67
RFFL-207ENST00000580569 MT1HL1P0DM35 61 aa4.63□□□□□ -1.67
RFFL-207ENST00000580569 MOBPQ13875 183 aa4.63□□□□□ -1.67
RFFL-207ENST00000580569 DEFB116Q30KQ4 102 aa4.63□□□□□ -1.67
RFFL-207ENST00000580569 LCE4AQ5TA78 99 aa4.62□□□□□ -1.67
RFFL-207ENST00000580569 PRR15Q8IV56 129 aa4.61□□□□□ -1.67
RFFL-207ENST00000580569 SS18L2Q9UHA2 77 aa4.61□□□□□ -1.67
RFFL-207ENST00000580569 A8MWP4 228 aa4.6□□□□□ -1.67
RFFL-207ENST00000580569 HCG22E2RYF7 251 aa4.6□□□□□ -1.67
RFFL-207ENST00000580569 KRTAP1-4P0C5Y4 121 aa4.6□□□□□ -1.67
RFFL-207ENST00000580569 KLKP1Q107X0 134 aa4.6□□□□□ -1.67
RFFL-207ENST00000580569 J3KT08 172 aa4.59□□□□□ -1.67
RFFL-207ENST00000580569 CD164Q04900 197 aa4.59□□□□□ -1.67
RFFL-207ENST00000580569 FAM229BQ4G0N7 80 aa4.59□□□□□ -1.67
RFFL-207ENST00000580569 KRTAP13-2Q52LG2 175 aa4.59□□□□□ -1.67
RFFL-207ENST00000580569 SSBP3-AS1Q7Z2R9 100 aa4.59□□□□□ -1.67
RFFL-207ENST00000580569 C20orf197Q8N268 126 aa4.59□□□□□ -1.67
RFFL-207ENST00000580569 KRTAP9-4Q9BYQ2 154 aa4.59□□□□□ -1.67
RFFL-207ENST00000580569 A0A087X002 238 aa4.58□□□□□ -1.68
RFFL-207ENST00000580569 ASB16-AS1Q495Z4 193 aa4.58□□□□□ -1.68
RFFL-207ENST00000580569 A0A0U1RQV1 116 aa4.57□□□□□ -1.68
RFFL-207ENST00000580569 H7BZZ5 65 aa4.57□□□□□ -1.68
RFFL-207ENST00000580569 HRCT1Q6UXD1 115 aa4.57□□□□□ -1.68
RFFL-207ENST00000580569 KRTAP9-2Q9BYQ4 174 aa4.57□□□□□ -1.68
RFFL-207ENST00000580569 MMP24-AS1A0A0U1RRL7 71 aa4.56□□□□□ -1.68
RFFL-207ENST00000580569 IGKV2-30P06310 120 aa4.56□□□□□ -1.68
RFFL-207ENST00000580569 TMEM258P61165 79 aa4.56□□□□□ -1.68
RFFL-207ENST00000580569 TMEM254Q8TBM7 123 aa4.55□□□□□ -1.68
RFFL-207ENST00000580569 ZCCHC13Q8WW36 166 aaKnown RBP4.55□□□□□ -1.68
RFFL-207ENST00000580569 Q5XG85 94 aa4.54□□□□□ -1.68
RFFL-207ENST00000580569 WFDC13Q8IUB5 93 aa4.54□□□□□ -1.68
RFFL-207ENST00000580569 SNURFQ9Y675 71 aa4.54□□□□□ -1.68
RFFL-207ENST00000580569 MUC2Q02817 5179 aa4.54□□□□□ -1.68
RFFL-207ENST00000580569 LPAP08519 4548 aa4.53□□□□□ -1.68
RFFL-207ENST00000580569 A0A1B0GVX0 72 aa4.53□□□□□ -1.68
RFFL-207ENST00000580569 CASC2Q6XLA1 102 aa4.53□□□□□ -1.68
RFFL-207ENST00000580569 NDUFC1O43677 76 aa4.52□□□□□ -1.69
RFFL-207ENST00000580569 SPINK6Q6UWN8 80 aa4.52□□□□□ -1.69
RFFL-207ENST00000580569 C8orf17Q9NRJ1 99 aa4.52□□□□□ -1.69
RFFL-207ENST00000580569 FAT4Q6V0I7 4981 aa4.52□□□□□ -1.69
RFFL-207ENST00000580569 NDUFB1O75438 58 aa4.51□□□□□ -1.69
RFFL-207ENST00000580569 RPS28P62857 69 aaKnown RBP4.51□□□□□ -1.69
RFFL-207ENST00000580569 C5orf47Q569G3 176 aa4.51□□□□□ -1.69
RFFL-207ENST00000580569 KRTAP4-12Q9BQ66 201 aa4.51□□□□□ -1.69
RFFL-207ENST00000580569 KRTAP9-9Q9BYP9 154 aa4.51□□□□□ -1.69
RFFL-207ENST00000580569 hDV103S1A0JD37 113 aa4.5□□□□□ -1.69
RFFL-207ENST00000580569 NOTCH2NLQ7Z3S9 236 aa4.5□□□□□ -1.69
RFFL-207ENST00000580569 FAM236DA0A1B0GTK5 79 aa4.48□□□□□ -1.69
RFFL-207ENST00000580569 FAM236CP0DP71 79 aa4.48□□□□□ -1.69
RFFL-207ENST00000580569 C1orf195Q5TG92 126 aa4.48□□□□□ -1.69
RFFL-207ENST00000580569 IGHV6-1A0A0B4J1U7 121 aa4.47□□□□□ -1.69
RFFL-207ENST00000580569 H3BPC8 53 aa4.46□□□□□ -1.7
RFFL-207ENST00000580569 MRPL34Q9BQ48 92 aaKnown RBP4.46□□□□□ -1.7
RFFL-207ENST00000580569 C8orf87E5RJ46 101 aa4.45□□□□□ -1.7
RFFL-207ENST00000580569 H0Y9P7 68 aa4.45□□□□□ -1.7
RFFL-207ENST00000580569 KRTAP10-8P60410 259 aa4.45□□□□□ -1.7
RFFL-207ENST00000580569 TYMSOSQ8TAI1 123 aa4.45□□□□□ -1.7
RFFL-207ENST00000580569 TP53AIP1Q9HCN2 124 aa4.45□□□□□ -1.7
RFFL-207ENST00000580569 SPINK1P00995 79 aa4.44□□□□□ -1.7
RFFL-207ENST00000580569 ATP5EP56381 51 aaPredicted RBP4.44□□□□□ -1.7
RFFL-207ENST00000580569 RPS29P62273 56 aaKnown RBP4.44□□□□□ -1.7
RFFL-207ENST00000580569 KRTAP13-3Q3SY46 172 aa4.44□□□□□ -1.7
RFFL-207ENST00000580569 TRAV22A0A0B4J277 110 aa4.43□□□□□ -1.7
RFFL-207ENST00000580569 KRTAP16-1A8MUX0 517 aa4.43□□□□□ -1.7
RFFL-207ENST00000580569 MP68P56378 58 aa4.43□□□□□ -1.7
RFFL-207ENST00000580569 LIMD2Q9BT23 127 aa4.43□□□□□ -1.7
RFFL-207ENST00000580569 KRTAP4-8Q9BYQ9 185 aa4.43□□□□□ -1.7
RFFL-207ENST00000580569 LINC00208Q96KT6 92 aa4.42□□□□□ -1.7
RFFL-207ENST00000580569 SERP1Q9Y6X1 66 aa4.42□□□□□ -1.7
RFFL-207ENST00000580569 Q8N9P0 234 aaPredicted RBP4.41□□□□□ -1.7
RFFL-207ENST00000580569 KRTAP9-3Q9BYQ3 159 aa4.41□□□□□ -1.7
RFFL-207ENST00000580569 LINC00313P59037 77 aa4.4□□□□□ -1.71
RFFL-207ENST00000580569 SPAG11AQ6PDA7 123 aa4.4□□□□□ -1.71
RFFL-207ENST00000580569 LINC00304Q8N9R0 145 aa4.4□□□□□ -1.71
RFFL-207ENST00000580569 C1orf64Q8NEQ6 169 aa4.4□□□□□ -1.71
RFFL-207ENST00000580569 CYP4F30PQ9H0H9 118 aa4.4□□□□□ -1.71
RFFL-207ENST00000580569 Q5W150 140 aa4.39□□□□□ -1.71
RFFL-207ENST00000580569 IGLV7-46A0A075B6I9 117 aa4.38□□□□□ -1.71
RFFL-207ENST00000580569 SPANXA2-OT1Q8N9U9 137 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms