RNA–Protein interactions for RNA: ENST00000580465.5

BPTF-213, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 2

Gene BPTF, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-213ENST00000580465 LINC01556Q5JQF7 62 aa3.15□□□□□ -1.91
BPTF-213ENST00000580465 MUC3AQ02505 3323 aa3.15□□□□□ -1.91
BPTF-213ENST00000580465 MYO15AQ9UKN7 3530 aa3.15□□□□□ -1.91
BPTF-213ENST00000580465 KRTAP13-4Q3LI77 160 aa3.14□□□□□ -1.91
BPTF-213ENST00000580465 LCE5AQ5TCM9 118 aa3.14□□□□□ -1.91
BPTF-213ENST00000580465 CCDC168Q8NDH2 2452 aa3.14□□□□□ -1.91
BPTF-213ENST00000580465 JMJD1CQ15652 2540 aa3.14□□□□□ -1.91
BPTF-213ENST00000580465 APCP25054 2843 aa3.13□□□□□ -1.91
BPTF-213ENST00000580465 ANKHD1Q8IWZ3 2542 aaKnown RBP3.13□□□□□ -1.91
BPTF-213ENST00000580465 NBPF19A0A087WUL8 3843 aa3.12□□□□□ -1.91
BPTF-213ENST00000580465 KRTAP10-6P60371 365 aaPredicted RBP3.12□□□□□ -1.91
BPTF-213ENST00000580465 MEGF8Q7Z7M0 2845 aa3.11□□□□□ -1.91
BPTF-213ENST00000580465 NBASA2RRP1 2371 aa3.11□□□□□ -1.91
BPTF-213ENST00000580465 KRTAP12-1P59990 96 aa3.11□□□□□ -1.91
BPTF-213ENST00000580465 F8P00451 2351 aa3.1□□□□□ -1.91
BPTF-213ENST00000580465 NAV2Q8IVL1 2488 aa3.09□□□□□ -1.91
BPTF-213ENST00000580465 SPART-AS1P0CW21 52 aa3.09□□□□□ -1.92
BPTF-213ENST00000580465 DEFB124Q8NES8 71 aa3.09□□□□□ -1.92
BPTF-213ENST00000580465 TEX15Q9BXT5 2789 aa3.08□□□□□ -1.92
BPTF-213ENST00000580465 TLN1Q9Y490 2541 aaKnown RBP3.07□□□□□ -1.92
BPTF-213ENST00000580465 HTN3P15516 51 aa3.05□□□□□ -1.92
BPTF-213ENST00000580465 HIVEP3Q5T1R4 2406 aa3.05□□□□□ -1.92
BPTF-213ENST00000580465 ADGRG4Q8IZF6 3080 aa3.05□□□□□ -1.92
BPTF-213ENST00000580465 CEP290O15078 2479 aa3.05□□□□□ -1.92
BPTF-213ENST00000580465 COL6A5A8TX70 2615 aa3.04□□□□□ -1.92
BPTF-213ENST00000580465 DCHS2Q6V1P9 2916 aa3.04□□□□□ -1.92
BPTF-213ENST00000580465 CSMD3Q7Z407 3707 aa3.03□□□□□ -1.92
BPTF-213ENST00000580465 SONP18583 2426 aaKnown RBP3.03□□□□□ -1.92
BPTF-213ENST00000580465 USP9XQ93008 2570 aaPredicted RBP3.01□□□□□ -1.93
BPTF-213ENST00000580465 SPTAN1Q13813 2472 aaKnown RBP3□□□□□ -1.93
BPTF-213ENST00000580465 NIPBLQ6KC79 2804 aaeCLIP3□□□□□ -1.93
BPTF-213ENST00000580465 UTP20O75691 2785 aaKnown RBP3□□□□□ -1.93
BPTF-213ENST00000580465 DEFB4AO15263 64 aa2.99□□□□□ -1.93
BPTF-213ENST00000580465 BSNQ9UPA5 3926 aa2.98□□□□□ -1.93
BPTF-213ENST00000580465 TLN2Q9Y4G6 2542 aa2.98□□□□□ -1.93
BPTF-213ENST00000580465 SETXQ7Z333 2677 aaKnown RBP2.98□□□□□ -1.93
BPTF-213ENST00000580465 TTC28Q96AY4 2481 aa2.98□□□□□ -1.93
BPTF-213ENST00000580465 DEFB135Q30KP9 77 aa2.98□□□□□ -1.93
BPTF-213ENST00000580465 Q5VSD8 79 aa2.98□□□□□ -1.93
BPTF-213ENST00000580465 PKD1L2Q7Z442 2459 aa2.97□□□□□ -1.93
BPTF-213ENST00000580465 SETD2Q9BYW2 2564 aaPredicted RBP2.97□□□□□ -1.93
BPTF-213ENST00000580465 A0A1B0GVY2 172 aa2.96□□□□□ -1.94
BPTF-213ENST00000580465 M0QZ58 72 aa2.96□□□□□ -1.94
BPTF-213ENST00000580465 PTPN13Q12923 2485 aa2.95□□□□□ -1.94
BPTF-213ENST00000580465 DMBT1Q9UGM3 2413 aaPredicted RBP2.95□□□□□ -1.94
BPTF-213ENST00000580465 HECTD1Q9ULT8 2610 aa2.94□□□□□ -1.94
BPTF-213ENST00000580465 HRNRQ86YZ3 2850 aaPredicted RBP2.94□□□□□ -1.94
BPTF-213ENST00000580465 EYSQ5T1H1 3165 aa2.94□□□□□ -1.94
BPTF-213ENST00000580465 MAPK1IP1LQ8NDC0 245 aa2.93□□□□□ -1.94
BPTF-213ENST00000580465 VPS13DQ5THJ4 4388 aa2.93□□□□□ -1.94
BPTF-213ENST00000580465 KRTAP13-2Q52LG2 175 aa2.92□□□□□ -1.94
BPTF-213ENST00000580465 SVEP1Q4LDE5 3571 aa2.92□□□□□ -1.94
BPTF-213ENST00000580465 CSMD2Q7Z408 3487 aa2.91□□□□□ -1.94
BPTF-213ENST00000580465 ABCA12Q86UK0 2595 aa2.91□□□□□ -1.94
BPTF-213ENST00000580465 ITPR3Q14573 2671 aa2.9□□□□□ -1.94
BPTF-213ENST00000580465 COL7A1Q02388 2944 aa2.9□□□□□ -1.94
BPTF-213ENST00000580465 KRTAP10-11P60412 298 aa2.9□□□□□ -1.95
BPTF-213ENST00000580465 USP9YO00507 2555 aaPredicted RBP2.9□□□□□ -1.95
BPTF-213ENST00000580465 FRAS1Q86XX4 4008 aa2.9□□□□□ -1.95
BPTF-213ENST00000580465 MTORP42345 2549 aa2.89□□□□□ -1.95
BPTF-213ENST00000580465 CENPEQ02224 2701 aa2.88□□□□□ -1.95
BPTF-213ENST00000580465 NBEAL2Q6ZNJ1 2754 aa2.88□□□□□ -1.95
BPTF-213ENST00000580465 GCN1Q92616 2671 aaKnown RBP2.88□□□□□ -1.95
BPTF-213ENST00000580465 LCE1AQ5T7P2 110 aa2.88□□□□□ -1.95
BPTF-213ENST00000580465 CFAP46Q8IYW2 2715 aa2.88□□□□□ -1.95
BPTF-213ENST00000580465 CHD8Q9HCK8 2581 aa2.87□□□□□ -1.95
BPTF-213ENST00000580465 LRRK2Q5S007 2527 aa2.87□□□□□ -1.95
BPTF-213ENST00000580465 HMCN1Q96RW7 5635 aa2.87□□□□□ -1.95
BPTF-213ENST00000580465 NBEAL1Q6ZS30 2694 aa2.86□□□□□ -1.95
BPTF-213ENST00000580465 PDZD2O15018 2839 aa2.86□□□□□ -1.95
BPTF-213ENST00000580465 VPS13CQ709C8 3753 aa2.86□□□□□ -1.95
BPTF-213ENST00000580465 ZFYVE26Q68DK2 2539 aa2.86□□□□□ -1.95
BPTF-213ENST00000580465 HELZ2Q9BYK8 2649 aaKnown RBP2.85□□□□□ -1.95
BPTF-213ENST00000580465 TGP01266 2768 aa2.85□□□□□ -1.95
BPTF-213ENST00000580465 TRRAPQ9Y4A5 3859 aa2.84□□□□□ -1.95
BPTF-213ENST00000580465 DOPEY1Q5JWR5 2465 aa2.84□□□□□ -1.95
BPTF-213ENST00000580465 DNAH11Q96DT5 4516 aa2.84□□□□□ -1.95
BPTF-213ENST00000580465 CUBNO60494 3623 aa2.84□□□□□ -1.95
BPTF-213ENST00000580465 EPG5Q9HCE0 2579 aa2.83□□□□□ -1.96
BPTF-213ENST00000580465 BDP1A6H8Y1 2624 aa2.83□□□□□ -1.96
BPTF-213ENST00000580465 UNC79Q9P2D8 2635 aa2.83□□□□□ -1.96
BPTF-213ENST00000580465 DNAH1Q9P2D7 4330 aa2.82□□□□□ -1.96
BPTF-213ENST00000580465 TENM4Q6N022 2769 aa2.81□□□□□ -1.96
BPTF-213ENST00000580465 KRTAP10-9P60411 292 aa2.81□□□□□ -1.96
BPTF-213ENST00000580465 MXRA5Q9NR99 2828 aa2.81□□□□□ -1.96
BPTF-213ENST00000580465 MT3P25713 68 aa2.8□□□□□ -1.96
BPTF-213ENST00000580465 KRTAP1-1Q07627 177 aa2.8□□□□□ -1.96
BPTF-213ENST00000580465 LYSTQ99698 3801 aa2.79□□□□□ -1.96
BPTF-213ENST00000580465 USP24Q9UPU5 2620 aa2.78□□□□□ -1.96
BPTF-213ENST00000580465 ZNF292O60281 2723 aa2.78□□□□□ -1.96
BPTF-213ENST00000580465 MYCBP2O75592 4640 aa2.77□□□□□ -1.97
BPTF-213ENST00000580465 ANK2Q01484 3957 aa2.76□□□□□ -1.97
BPTF-213ENST00000580465 ITPR2Q14571 2701 aa2.76□□□□□ -1.97
BPTF-213ENST00000580465 DNAH8Q96JB1 4490 aa2.76□□□□□ -1.97
BPTF-213ENST00000580465 KRTAP1-5Q9BYS1 174 aa2.76□□□□□ -1.97
BPTF-213ENST00000580465 PIEZO1Q92508 2521 aa2.75□□□□□ -1.97
BPTF-213ENST00000580465 HIVEP1P15822 2718 aa2.75□□□□□ -1.97
BPTF-213ENST00000580465 MYO9AB2RTY4 2548 aa2.75□□□□□ -1.97
BPTF-213ENST00000580465 CACNA1AO00555 2505 aa2.75□□□□□ -1.97
BPTF-213ENST00000580465 RPS29P62273 56 aaKnown RBP2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms