RNA–Protein interactions for RNA: ENST00000579814.1

LIMD2-208, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 709 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-208ENST00000579814 PDE6GP18545 87 aa13.54□□□□□ -0.24
LIMD2-208ENST00000579814 LOC110117498A0A087WWA1 95 aa13.53□□□□□ -0.24
LIMD2-208ENST00000579814 C8orf87E5RJ46 101 aa13.53□□□□□ -0.24
LIMD2-208ENST00000579814 A0A1B0GVX0 72 aa13.52□□□□□ -0.25
LIMD2-208ENST00000579814 A0A1B0GW54 56 aa13.52□□□□□ -0.25
LIMD2-208ENST00000579814 LCE2DQ5TA82 110 aaPredicted RBP13.5□□□□□ -0.25
LIMD2-208ENST00000579814 C9orf118A6NHY6 69 aa13.46□□□□□ -0.25
LIMD2-208ENST00000579814 KRTAP10-6P60371 365 aaPredicted RBP13.46□□□□□ -0.25
LIMD2-208ENST00000579814 C14orf132Q9NPU4 83 aa13.46□□□□□ -0.25
LIMD2-208ENST00000579814 NDUFB1O75438 58 aa13.45□□□□□ -0.26
LIMD2-208ENST00000579814 LORP23490 312 aaPredicted RBP13.44□□□□□ -0.26
LIMD2-208ENST00000579814 TAX1BP3O14907 124 aa13.4□□□□□ -0.26
LIMD2-208ENST00000579814 FLGP20930 4061 aaPredicted RBP13.39□□□□□ -0.27
LIMD2-208ENST00000579814 A0A1W2PPM0 123 aa13.38□□□□□ -0.27
LIMD2-208ENST00000579814 A8MWP4 228 aa13.36□□□□□ -0.27
LIMD2-208ENST00000579814 H3BT86 120 aa13.36□□□□□ -0.27
LIMD2-208ENST00000579814 KRTAP9-6A0A140TA67 174 aa13.34□□□□□ -0.27
LIMD2-208ENST00000579814 NREPQ16612 68 aa13.34□□□□□ -0.27
LIMD2-208ENST00000579814 C8orf17Q9NRJ1 99 aa13.29□□□□□ -0.28
LIMD2-208ENST00000579814 IGKV3D-7A0A0C4DH55 119 aa13.28□□□□□ -0.28
LIMD2-208ENST00000579814 MTURNQ8N3F0 131 aa13.28□□□□□ -0.28
LIMD2-208ENST00000579814 ZCCHC13Q8WW36 166 aaKnown RBP13.28□□□□□ -0.28
LIMD2-208ENST00000579814 FAM236DA0A1B0GTK5 79 aa13.27□□□□□ -0.29
LIMD2-208ENST00000579814 FAM236CP0DP71 79 aa13.27□□□□□ -0.29
LIMD2-208ENST00000579814 Q8N9P0 234 aaPredicted RBP13.26□□□□□ -0.29
LIMD2-208ENST00000579814 RBM12B-AS1Q9P1G2 102 aa13.26□□□□□ -0.29
LIMD2-208ENST00000579814 HRES1P13985 223 aa13.23□□□□□ -0.29
LIMD2-208ENST00000579814 PRR15Q8IV56 129 aa13.23□□□□□ -0.29
LIMD2-208ENST00000579814 SPCS1Q9Y6A9 102 aa13.22□□□□□ -0.29
LIMD2-208ENST00000579814 MPLKIPQ8TAP9 179 aa13.2□□□□□ -0.3
LIMD2-208ENST00000579814 Q6ZVQ6 151 aa13.19□□□□□ -0.3
LIMD2-208ENST00000579814 SPINK7P58062 85 aa13.15□□□□□ -0.3
LIMD2-208ENST00000579814 COL5A1-AS1Q5SY13 56 aa13.15□□□□□ -0.3
LIMD2-208ENST00000579814 CRCT1Q9UGL9 99 aa13.11□□□□□ -0.31
LIMD2-208ENST00000579814 TMEM254Q8TBM7 123 aa13.1□□□□□ -0.31
LIMD2-208ENST00000579814 BPY2O14599 106 aa13.09□□□□□ -0.31
LIMD2-208ENST00000579814 MRPL34Q9BQ48 92 aaKnown RBP13.09□□□□□ -0.31
LIMD2-208ENST00000579814 MMP24-AS1A0A0U1RRL7 71 aa13.08□□□□□ -0.32
LIMD2-208ENST00000579814 FSIP2Q5CZC0 6907 aa13.08□□□□□ -0.32
LIMD2-208ENST00000579814 K7EQZ3 153 aa13.07□□□□□ -0.32
LIMD2-208ENST00000579814 SMCPP49901 116 aaPredicted RBP13.06□□□□□ -0.32
LIMD2-208ENST00000579814 hDV103S1A0JD37 113 aa13.04□□□□□ -0.32
LIMD2-208ENST00000579814 KRTAP9-8Q9BYQ0 159 aa13.01□□□□□ -0.33
LIMD2-208ENST00000579814 K7EP34 96 aa13□□□□□ -0.33
LIMD2-208ENST00000579814 NDUFS5O43920 106 aa12.99□□□□□ -0.33
LIMD2-208ENST00000579814 PRO0461Q9UI25 63 aa12.97□□□□□ -0.33
LIMD2-208ENST00000579814 WFDC13Q8IUB5 93 aa12.95□□□□□ -0.34
LIMD2-208ENST00000579814 Q8N9L7 120 aa12.9□□□□□ -0.34
LIMD2-208ENST00000579814 UBL5Q9BZL1 73 aa12.89□□□□□ -0.35
LIMD2-208ENST00000579814 GTF2H5Q6ZYL4 71 aa12.88□□□□□ -0.35
LIMD2-208ENST00000579814 CASC2Q6XLA1 102 aa12.87□□□□□ -0.35
LIMD2-208ENST00000579814 LINC00846Q9NV44 126 aa12.87□□□□□ -0.35
LIMD2-208ENST00000579814 PCP4L1A6NKN8 68 aa12.85□□□□□ -0.35
LIMD2-208ENST00000579814 MT2AP02795 61 aa12.83□□□□□ -0.36
LIMD2-208ENST00000579814 F8W1H4 67 aa12.79□□□□□ -0.36
LIMD2-208ENST00000579814 HCG22E2RYF7 251 aa12.78□□□□□ -0.36
LIMD2-208ENST00000579814 Q5W150 140 aa12.78□□□□□ -0.36
LIMD2-208ENST00000579814 IGKV2D-30A0A075B6S6 120 aa12.76□□□□□ -0.37
LIMD2-208ENST00000579814 IGKV2-30P06310 120 aa12.76□□□□□ -0.37
LIMD2-208ENST00000579814 KRTAP10-10P60014 251 aa12.74□□□□□ -0.37
LIMD2-208ENST00000579814 C7orf65Q6ZTY9 151 aa12.73□□□□□ -0.37
LIMD2-208ENST00000579814 MT1FP04733 61 aa12.72□□□□□ -0.37
LIMD2-208ENST00000579814 CXCL6P80162 114 aa12.72□□□□□ -0.37
LIMD2-208ENST00000579814 ETDBQ3ZM63 59 aa12.7□□□□□ -0.38
LIMD2-208ENST00000579814 H1FX-AS1Q4G0G2 97 aa12.68□□□□□ -0.38
LIMD2-208ENST00000579814 KRTAP9-3Q9BYQ3 159 aa12.6□□□□□ -0.39
LIMD2-208ENST00000579814 USH2AO75445 5202 aa12.56□□□□□ -0.4
LIMD2-208ENST00000579814 C4orf26Q17RF5 130 aa12.52□□□□□ -0.41
LIMD2-208ENST00000579814 TP53AIP1Q9HCN2 124 aa12.52□□□□□ -0.41
LIMD2-208ENST00000579814 LCE2BO14633 110 aa12.51□□□□□ -0.41
LIMD2-208ENST00000579814 ACYP1P07311 99 aa12.46□□□□□ -0.41
LIMD2-208ENST00000579814 SSPOA2VEC9 5147 aa12.41□□□□□ -0.42
LIMD2-208ENST00000579814 FAM240AA0A1B0GVK7 77 aa12.36□□□□□ -0.43
LIMD2-208ENST00000579814 C1orf64Q8NEQ6 169 aa12.32□□□□□ -0.44
LIMD2-208ENST00000579814 ATP5EP2Q5VTU8 51 aa12.31□□□□□ -0.44
LIMD2-208ENST00000579814 KRTAP3-1Q9BYR8 98 aa12.3□□□□□ -0.44
LIMD2-208ENST00000579814 KRTAP19-1Q8IUB9 90 aa12.28□□□□□ -0.44
LIMD2-208ENST00000579814 HIST1H4AP62805 103 aaKnown RBP12.25□□□□□ -0.45
LIMD2-208ENST00000579814 S4R3F8 94 aa12.25□□□□□ -0.45
LIMD2-208ENST00000579814 C5orf47Q569G3 176 aa12.24□□□□□ -0.45
LIMD2-208ENST00000579814 CYP4F30PQ9H0H9 118 aa12.23□□□□□ -0.45
LIMD2-208ENST00000579814 TRAV22A0A0B4J277 110 aa12.21□□□□□ -0.45
LIMD2-208ENST00000579814 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.18□□□□□ -0.46
LIMD2-208ENST00000579814 CSAG1Q6PB30 78 aa12.18□□□□□ -0.46
LIMD2-208ENST00000579814 LOC101927531A0A1B0GV80 90 aa12.17□□□□□ -0.46
LIMD2-208ENST00000579814 LINC00643Q86TS7 51 aa12.15□□□□□ -0.46
LIMD2-208ENST00000579814 FCGBPQ9Y6R7 5405 aaPredicted RBP12.15□□□□□ -0.47
LIMD2-208ENST00000579814 UQCRQO14949 82 aa12.14□□□□□ -0.47
LIMD2-208ENST00000579814 LCA10Q71F78 164 aa12.14□□□□□ -0.47
LIMD2-208ENST00000579814 A0A1B0GV90 55 aa12.12□□□□□ -0.47
LIMD2-208ENST00000579814 FAM236AA0A1B0GUQ0 79 aa12.09□□□□□ -0.47
LIMD2-208ENST00000579814 FAM236BA0A1B0GV22 79 aa12.09□□□□□ -0.47
LIMD2-208ENST00000579814 KRTAP19-6Q3LI70 58 aa12.08□□□□□ -0.48
LIMD2-208ENST00000579814 ATOX1O00244 68 aa12.06□□□□□ -0.48
LIMD2-208ENST00000579814 A0A087WVE0 104 aa12.05□□□□□ -0.48
LIMD2-208ENST00000579814 H0Y9P7 68 aa12.05□□□□□ -0.48
LIMD2-208ENST00000579814 KRTAP9-7A8MTY7 169 aa12.01□□□□□ -0.49
LIMD2-208ENST00000579814 KRTAP3-3Q9BYR6 98 aa11.96□□□□□ -0.49
LIMD2-208ENST00000579814 J3QR89 54 aa11.93□□□□□ -0.5
LIMD2-208ENST00000579814 LINC00208Q96KT6 92 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms