RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 FAT1Q14517 4588 aa12.02□□□□□ -0.49
SMG8-203ENST00000578922 C1orf64Q8NEQ6 169 aa12.01□□□□□ -0.49
SMG8-203ENST00000578922 TRAV22A0A0B4J277 110 aa11.99□□□□□ -0.49
SMG8-203ENST00000578922 MPLKIPQ8TAP9 179 aa11.99□□□□□ -0.49
SMG8-203ENST00000578922 A0A087X002 238 aa11.96□□□□□ -0.5
SMG8-203ENST00000578922 LINC00208Q96KT6 92 aa11.96□□□□□ -0.5
SMG8-203ENST00000578922 H0Y9P7 68 aa11.95□□□□□ -0.5
SMG8-203ENST00000578922 SPANXA2-OT1Q8N9U9 137 aa11.94□□□□□ -0.5
SMG8-203ENST00000578922 Q1T7F1 81 aa11.93□□□□□ -0.5
SMG8-203ENST00000578922 KRTAP1-4P0C5Y4 121 aa11.92□□□□□ -0.5
SMG8-203ENST00000578922 MMP24-AS1A0A0U1RRL7 71 aa11.91□□□□□ -0.5
SMG8-203ENST00000578922 KRTAP13-2Q52LG2 175 aa11.9□□□□□ -0.5
SMG8-203ENST00000578922 SPINK6Q6UWN8 80 aa11.89□□□□□ -0.51
SMG8-203ENST00000578922 PLA2G1BP04054 148 aaKnown RBP11.88□□□□□ -0.51
SMG8-203ENST00000578922 KRTAP10-4P60372 401 aaPredicted RBP11.88□□□□□ -0.51
SMG8-203ENST00000578922 Q96NJ1 140 aa11.86□□□□□ -0.51
SMG8-203ENST00000578922 PRR4Q16378 134 aa11.85□□□□□ -0.51
SMG8-203ENST00000578922 ASB16-AS1Q495Z4 193 aa11.85□□□□□ -0.51
SMG8-203ENST00000578922 BRK1Q8WUW1 75 aa11.84□□□□□ -0.51
SMG8-203ENST00000578922 SSBP3-AS1Q7Z2R9 100 aa11.84□□□□□ -0.51
SMG8-203ENST00000578922 TP53AIP1Q9HCN2 124 aa11.84□□□□□ -0.51
SMG8-203ENST00000578922 HSPG2P98160 4391 aa11.82□□□□□ -0.52
SMG8-203ENST00000578922 EPPK1P58107 5090 aaKnown RBP11.82□□□□□ -0.52
SMG8-203ENST00000578922 V9GYY9 64 aa11.82□□□□□ -0.52
SMG8-203ENST00000578922 CDK2AP2O75956 126 aa11.78□□□□□ -0.52
SMG8-203ENST00000578922 FAM229AH3BQW9 127 aa11.78□□□□□ -0.52
SMG8-203ENST00000578922 PRR26Q8N8Z3 221 aa11.78□□□□□ -0.52
SMG8-203ENST00000578922 C8orf17Q9NRJ1 99 aa11.78□□□□□ -0.52
SMG8-203ENST00000578922 RYR1P21817 5038 aa11.77□□□□□ -0.53
SMG8-203ENST00000578922 TYMSOSQ8TAI1 123 aa11.77□□□□□ -0.53
SMG8-203ENST00000578922 KIAA1109Q2LD37 5005 aa11.75□□□□□ -0.53
SMG8-203ENST00000578922 A0A1B0GVX0 72 aa11.74□□□□□ -0.53
SMG8-203ENST00000578922 Q5VSD8 79 aa11.74□□□□□ -0.53
SMG8-203ENST00000578922 IGLV7-46A0A075B6I9 117 aa11.72□□□□□ -0.53
SMG8-203ENST00000578922 CD164Q04900 197 aa11.72□□□□□ -0.53
SMG8-203ENST00000578922 C1orf195Q5TG92 126 aa11.69□□□□□ -0.54
SMG8-203ENST00000578922 KRTAP17-1Q9BYP8 105 aa11.69□□□□□ -0.54
SMG8-203ENST00000578922 IGHV6-1A0A0B4J1U7 121 aa11.67□□□□□ -0.54
SMG8-203ENST00000578922 MRPL34Q9BQ48 92 aaKnown RBP11.66□□□□□ -0.54
SMG8-203ENST00000578922 PSPHP1O15172 72 aa11.65□□□□□ -0.54
SMG8-203ENST00000578922 LIMD2Q9BT23 127 aa11.65□□□□□ -0.54
SMG8-203ENST00000578922 C4orf48Q5BLP8 95 aa11.65□□□□□ -0.54
SMG8-203ENST00000578922 Q8N9P0 234 aaPredicted RBP11.62□□□□□ -0.55
SMG8-203ENST00000578922 PKHD1L1Q86WI1 4243 aa11.62□□□□□ -0.55
SMG8-203ENST00000578922 NDUFS5O43920 106 aa11.61□□□□□ -0.55
SMG8-203ENST00000578922 COA5Q86WW8 74 aa11.6□□□□□ -0.55
SMG8-203ENST00000578922 LINC00304Q8N9R0 145 aa11.6□□□□□ -0.55
SMG8-203ENST00000578922 A8MUN3 132 aa11.6□□□□□ -0.55
SMG8-203ENST00000578922 PCOTHQ58A44 107 aa11.58□□□□□ -0.56
SMG8-203ENST00000578922 LRP1Q07954 4544 aaKnown RBP11.56□□□□□ -0.56
SMG8-203ENST00000578922 SPINK1P00995 79 aa11.55□□□□□ -0.56
SMG8-203ENST00000578922 Q5VV11 94 aa11.55□□□□□ -0.56
SMG8-203ENST00000578922 Q8N1X5 172 aa11.53□□□□□ -0.56
SMG8-203ENST00000578922 NOTCH2NLQ7Z3S9 236 aa11.52□□□□□ -0.56
SMG8-203ENST00000578922 FLG2Q5D862 2391 aaPredicted RBP11.51□□□□□ -0.57
SMG8-203ENST00000578922 LOC101927531A0A1B0GV80 90 aa11.51□□□□□ -0.57
SMG8-203ENST00000578922 SPAG11AQ6PDA7 123 aa11.49□□□□□ -0.57
SMG8-203ENST00000578922 C8orf87E5RJ46 101 aa11.48□□□□□ -0.57
SMG8-203ENST00000578922 PRR15LQ9BU68 103 aa11.47□□□□□ -0.57
SMG8-203ENST00000578922 Q75L30 129 aa11.45□□□□□ -0.58
SMG8-203ENST00000578922 CHKB-CPT1BH3BT56 60 aa11.44□□□□□ -0.58
SMG8-203ENST00000578922 KRTAP13-3Q3SY46 172 aa11.44□□□□□ -0.58
SMG8-203ENST00000578922 TNXBP22105 4242 aa11.42□□□□□ -0.58
SMG8-203ENST00000578922 RPS29P62273 56 aaKnown RBP11.41□□□□□ -0.58
SMG8-203ENST00000578922 MYCBP2O75592 4640 aa11.41□□□□□ -0.58
SMG8-203ENST00000578922 LINC01558Q9Y6Z2 57 aa11.41□□□□□ -0.58
SMG8-203ENST00000578922 FAT3Q8TDW7 4589 aa11.4□□□□□ -0.58
SMG8-203ENST00000578922 HRES1P13985 223 aa11.4□□□□□ -0.58
SMG8-203ENST00000578922 KRTAP10-8P60410 259 aa11.4□□□□□ -0.59
SMG8-203ENST00000578922 Q5W150 140 aa11.39□□□□□ -0.59
SMG8-203ENST00000578922 RETNLBQ9BQ08 111 aa11.37□□□□□ -0.59
SMG8-203ENST00000578922 KRTAP4-5Q9BYR2 181 aa11.37□□□□□ -0.59
SMG8-203ENST00000578922 LINC00313P59037 77 aa11.34□□□□□ -0.59
SMG8-203ENST00000578922 A6NED7 52 aa11.3□□□□□ -0.6
SMG8-203ENST00000578922 DMBT1Q9UGM3 2413 aaPredicted RBP11.29□□□□□ -0.6
SMG8-203ENST00000578922 ACYP2P14621 99 aa11.28□□□□□ -0.6
SMG8-203ENST00000578922 PMAIP1Q13794 54 aa11.28□□□□□ -0.6
SMG8-203ENST00000578922 MT1HL1P0DM35 61 aa11.26□□□□□ -0.61
SMG8-203ENST00000578922 BIRC6Q9NR09 4857 aa11.25□□□□□ -0.61
SMG8-203ENST00000578922 A8MU10 97 aa11.25□□□□□ -0.61
SMG8-203ENST00000578922 ATP11AUNQ6ZP68 121 aa11.25□□□□□ -0.61
SMG8-203ENST00000578922 SEC61GP60059 68 aa11.24□□□□□ -0.61
SMG8-203ENST00000578922 LCA10Q71F78 164 aa11.24□□□□□ -0.61
SMG8-203ENST00000578922 CDC42SE1Q9NRR8 79 aa11.24□□□□□ -0.61
SMG8-203ENST00000578922 DMAC1Q96GE9 116 aa11.22□□□□□ -0.61
SMG8-203ENST00000578922 KRTAP16-1A8MUX0 517 aa11.21□□□□□ -0.62
SMG8-203ENST00000578922 C9orf92A6NGG3 77 aa11.2□□□□□ -0.62
SMG8-203ENST00000578922 IGKV2-30P06310 120 aa11.19□□□□□ -0.62
SMG8-203ENST00000578922 ABCA13Q86UQ4 5058 aa11.19□□□□□ -0.62
SMG8-203ENST00000578922 HERC2O95714 4834 aa11.13□□□□□ -0.63
SMG8-203ENST00000578922 SPTSSBQ8NFR3 76 aa11.13□□□□□ -0.63
SMG8-203ENST00000578922 SPINK7P58062 85 aa11.09□□□□□ -0.63
SMG8-203ENST00000578922 A6NN06 94 aa11.03□□□□□ -0.64
SMG8-203ENST00000578922 KTN1-AS1Q86SY8 53 aa11.02□□□□□ -0.65
SMG8-203ENST00000578922 IGKV2D-30A0A075B6S6 120 aa10.96□□□□□ -0.65
SMG8-203ENST00000578922 J3QL48 77 aa10.96□□□□□ -0.65
SMG8-203ENST00000578922 A0A1B0GU69 56 aa10.95□□□□□ -0.66
SMG8-203ENST00000578922 C20orf166-AS1Q96NR2 134 aa10.94□□□□□ -0.66
SMG8-203ENST00000578922 A8MUU9 505 aa10.94□□□□□ -0.66
SMG8-203ENST00000578922 C7orf65Q6ZTY9 151 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms