RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 A0A087X002 238 aa10.38□□□□□ -0.75
ERBB2-205ENST00000578199 NOTCH2NLQ7Z3S9 236 aa10.38□□□□□ -0.75
ERBB2-205ENST00000578199 C8orf17Q9NRJ1 99 aa10.38□□□□□ -0.75
ERBB2-205ENST00000578199 SPINK6Q6UWN8 80 aa10.37□□□□□ -0.75
ERBB2-205ENST00000578199 A0A1B0GVX0 72 aa10.36□□□□□ -0.75
ERBB2-205ENST00000578199 PSPHP1O15172 72 aa10.36□□□□□ -0.75
ERBB2-205ENST00000578199 KRTAP10-1P60331 282 aa10.34□□□□□ -0.75
ERBB2-205ENST00000578199 ASB16-AS1Q495Z4 193 aa10.34□□□□□ -0.75
ERBB2-205ENST00000578199 NDUFS5O43920 106 aa10.33□□□□□ -0.76
ERBB2-205ENST00000578199 CDK2AP2O75956 126 aa10.33□□□□□ -0.76
ERBB2-205ENST00000578199 CD164Q04900 197 aa10.31□□□□□ -0.76
ERBB2-205ENST00000578199 VPS13BQ7Z7G8 4022 aa10.31□□□□□ -0.76
ERBB2-205ENST00000578199 CYP4F30PQ9H0H9 118 aa10.3□□□□□ -0.76
ERBB2-205ENST00000578199 H3BPC8 53 aa10.29□□□□□ -0.76
ERBB2-205ENST00000578199 PCOTHQ58A44 107 aa10.27□□□□□ -0.77
ERBB2-205ENST00000578199 MRPL34Q9BQ48 92 aaKnown RBP10.26□□□□□ -0.77
ERBB2-205ENST00000578199 Q6ZSA8 131 aa10.25□□□□□ -0.77
ERBB2-205ENST00000578199 PKHD1P08F94 4074 aa10.25□□□□□ -0.77
ERBB2-205ENST00000578199 A8MU10 97 aa10.25□□□□□ -0.77
ERBB2-205ENST00000578199 A8MUN3 132 aa10.25□□□□□ -0.77
ERBB2-205ENST00000578199 TP53AIP1Q9HCN2 124 aa10.24□□□□□ -0.77
ERBB2-205ENST00000578199 KRTAP13-2Q52LG2 175 aa10.23□□□□□ -0.77
ERBB2-205ENST00000578199 SSBP3-AS1Q7Z2R9 100 aa10.22□□□□□ -0.77
ERBB2-205ENST00000578199 SPANXA2-OT1Q8N9U9 137 aa10.21□□□□□ -0.78
ERBB2-205ENST00000578199 Q5VV11 94 aa10.19□□□□□ -0.78
ERBB2-205ENST00000578199 SACSQ9NZJ4 4579 aa10.19□□□□□ -0.78
ERBB2-205ENST00000578199 Q5W150 140 aa10.15□□□□□ -0.78
ERBB2-205ENST00000578199 IGLV7-46A0A075B6I9 117 aa10.13□□□□□ -0.79
ERBB2-205ENST00000578199 KRTAP1-4P0C5Y4 121 aa10.13□□□□□ -0.79
ERBB2-205ENST00000578199 KTN1-AS1Q86SY8 53 aa10.13□□□□□ -0.79
ERBB2-205ENST00000578199 RBM12B-AS1Q9P1G2 102 aa10.1□□□□□ -0.79
ERBB2-205ENST00000578199 CHKB-CPT1BH3BT56 60 aa10.09□□□□□ -0.79
ERBB2-205ENST00000578199 Q8N9P0 234 aaPredicted RBP10.08□□□□□ -0.8
ERBB2-205ENST00000578199 LINC00313P59037 77 aa10.07□□□□□ -0.8
ERBB2-205ENST00000578199 COA5Q86WW8 74 aa10.07□□□□□ -0.8
ERBB2-205ENST00000578199 RETNLBQ9BQ08 111 aa10.07□□□□□ -0.8
ERBB2-205ENST00000578199 LIMD2Q9BT23 127 aa10.06□□□□□ -0.8
ERBB2-205ENST00000578199 PLA2G1BP04054 148 aaKnown RBP10.06□□□□□ -0.8
ERBB2-205ENST00000578199 KRTAP13-3Q3SY46 172 aa10.05□□□□□ -0.8
ERBB2-205ENST00000578199 SPTSSBQ8NFR3 76 aa10.04□□□□□ -0.8
ERBB2-205ENST00000578199 DYNC1H1Q14204 4646 aaKnown RBP10.03□□□□□ -0.8
ERBB2-205ENST00000578199 C8orf87E5RJ46 101 aa10.03□□□□□ -0.8
ERBB2-205ENST00000578199 PRR15LQ9BU68 103 aa10.03□□□□□ -0.8
ERBB2-205ENST00000578199 KRTAP21-3Q3LHN1 58 aa10.02□□□□□ -0.81
ERBB2-205ENST00000578199 LCA10Q71F78 164 aa10.02□□□□□ -0.81
ERBB2-205ENST00000578199 ATP11AUNQ6ZP68 121 aa10.01□□□□□ -0.81
ERBB2-205ENST00000578199 SMR3BP02814 79 aaPredicted RBP10□□□□□ -0.81
ERBB2-205ENST00000578199 LOC101927531A0A1B0GV80 90 aa9.99□□□□□ -0.81
ERBB2-205ENST00000578199 TYMSOSQ8TAI1 123 aa9.99□□□□□ -0.81
ERBB2-205ENST00000578199 FAT1Q14517 4588 aa9.98□□□□□ -0.81
ERBB2-205ENST00000578199 A6NN06 94 aa9.98□□□□□ -0.81
ERBB2-205ENST00000578199 Q75L30 129 aa9.97□□□□□ -0.81
ERBB2-205ENST00000578199 HRES1P13985 223 aa9.96□□□□□ -0.81
ERBB2-205ENST00000578199 C4orf48Q5BLP8 95 aa9.95□□□□□ -0.82
ERBB2-205ENST00000578199 A6NED7 52 aa9.94□□□□□ -0.82
ERBB2-205ENST00000578199 PRR26Q8N8Z3 221 aa9.94□□□□□ -0.82
ERBB2-205ENST00000578199 KRTAP16-1A8MUX0 517 aa9.94□□□□□ -0.82
ERBB2-205ENST00000578199 SPAG11AQ6PDA7 123 aa9.91□□□□□ -0.82
ERBB2-205ENST00000578199 APOBP04114 4563 aaKnown RBP9.9□□□□□ -0.82
ERBB2-205ENST00000578199 FAM229AH3BQW9 127 aa9.89□□□□□ -0.83
ERBB2-205ENST00000578199 CDC42SE1Q9NRR8 79 aa9.89□□□□□ -0.83
ERBB2-205ENST00000578199 SPINK1P00995 79 aa9.87□□□□□ -0.83
ERBB2-205ENST00000578199 KMT2CQ8NEZ4 4911 aaKnown RBP9.86□□□□□ -0.83
ERBB2-205ENST00000578199 C7orf65Q6ZTY9 151 aa9.86□□□□□ -0.83
ERBB2-205ENST00000578199 RYR2Q92736 4967 aa9.85□□□□□ -0.83
ERBB2-205ENST00000578199 LINC00304Q8N9R0 145 aa9.83□□□□□ -0.84
ERBB2-205ENST00000578199 IGKV2-30P06310 120 aa9.83□□□□□ -0.84
ERBB2-205ENST00000578199 A0A1B0GVY2 172 aa9.82□□□□□ -0.84
ERBB2-205ENST00000578199 IGKV2D-30A0A075B6S6 120 aa9.8□□□□□ -0.84
ERBB2-205ENST00000578199 ACYP2P14621 99 aa9.77□□□□□ -0.85
ERBB2-205ENST00000578199 LINC01558Q9Y6Z2 57 aa9.77□□□□□ -0.85
ERBB2-205ENST00000578199 PKHD1L1Q86WI1 4243 aa9.75□□□□□ -0.85
ERBB2-205ENST00000578199 KRTAP10-4P60372 401 aaPredicted RBP9.75□□□□□ -0.85
ERBB2-205ENST00000578199 DMAC1Q96GE9 116 aa9.75□□□□□ -0.85
ERBB2-205ENST00000578199 SPINK7P58062 85 aa9.71□□□□□ -0.85
ERBB2-205ENST00000578199 C9orf92A6NGG3 77 aa9.7□□□□□ -0.86
ERBB2-205ENST00000578199 RPS29P62273 56 aaKnown RBP9.67□□□□□ -0.86
ERBB2-205ENST00000578199 LRP1Q07954 4544 aaKnown RBP9.62□□□□□ -0.87
ERBB2-205ENST00000578199 PRAC1Q96KF2 57 aa9.58□□□□□ -0.88
ERBB2-205ENST00000578199 Q8N1X5 172 aa9.58□□□□□ -0.88
ERBB2-205ENST00000578199 RYR3Q15413 4870 aa9.56□□□□□ -0.88
ERBB2-205ENST00000578199 HSPG2P98160 4391 aa9.53□□□□□ -0.88
ERBB2-205ENST00000578199 TNXBP22105 4242 aa9.52□□□□□ -0.89
ERBB2-205ENST00000578199 ADM2Q7Z4H4 148 aa9.51□□□□□ -0.89
ERBB2-205ENST00000578199 A8MUU9 505 aa9.5□□□□□ -0.89
ERBB2-205ENST00000578199 FLG2Q5D862 2391 aaPredicted RBP9.5□□□□□ -0.89
ERBB2-205ENST00000578199 FAT3Q8TDW7 4589 aa9.5□□□□□ -0.89
ERBB2-205ENST00000578199 C20orf166-AS1Q96NR2 134 aa9.5□□□□□ -0.89
ERBB2-205ENST00000578199 A0A1B0GU69 56 aa9.49□□□□□ -0.89
ERBB2-205ENST00000578199 LINC01554Q52M75 96 aa9.48□□□□□ -0.89
ERBB2-205ENST00000578199 H3BS24 57 aa9.45□□□□□ -0.9
ERBB2-205ENST00000578199 Q5VSD8 79 aa9.41□□□□□ -0.9
ERBB2-205ENST00000578199 RYR1P21817 5038 aa9.39□□□□□ -0.91
ERBB2-205ENST00000578199 KRTAP17-1Q9BYP8 105 aa9.39□□□□□ -0.91
ERBB2-205ENST00000578199 KRTAP3-1Q9BYR8 98 aa9.38□□□□□ -0.91
ERBB2-205ENST00000578199 MYCBP2O75592 4640 aa9.37□□□□□ -0.91
ERBB2-205ENST00000578199 KRTAP10-8P60410 259 aa9.35□□□□□ -0.91
ERBB2-205ENST00000578199 KIAA1109Q2LD37 5005 aa9.34□□□□□ -0.91
ERBB2-205ENST00000578199 DMBT1Q9UGM3 2413 aaPredicted RBP9.34□□□□□ -0.91
ERBB2-205ENST00000578199 SPATA8Q6RVD6 105 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms