RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 KRTAP10-4P60372 401 aaPredicted RBP16■□□□□ 0.15
LIMD2-203ENST00000578067 APOBP04114 4563 aaKnown RBP15.99■□□□□ 0.15
LIMD2-203ENST00000578067 C4orf48Q5BLP8 95 aa15.95■□□□□ 0.14
LIMD2-203ENST00000578067 LIMD2Q9BT23 127 aa15.95■□□□□ 0.14
LIMD2-203ENST00000578067 PRR26Q8N8Z3 221 aa15.93■□□□□ 0.14
LIMD2-203ENST00000578067 C1orf195Q5TG92 126 aa15.92■□□□□ 0.14
LIMD2-203ENST00000578067 NOTCH2NLQ7Z3S9 236 aa15.92■□□□□ 0.14
LIMD2-203ENST00000578067 SPINK1P00995 79 aa15.89■□□□□ 0.13
LIMD2-203ENST00000578067 MP68P56378 58 aa15.89■□□□□ 0.13
LIMD2-203ENST00000578067 ZCCHC13Q8WW36 166 aaKnown RBP15.89■□□□□ 0.13
LIMD2-203ENST00000578067 FAM236DA0A1B0GTK5 79 aa15.88■□□□□ 0.13
LIMD2-203ENST00000578067 FAM236CP0DP71 79 aa15.88■□□□□ 0.13
LIMD2-203ENST00000578067 MRPL34Q9BQ48 92 aaKnown RBP15.88■□□□□ 0.13
LIMD2-203ENST00000578067 TP53AIP1Q9HCN2 124 aa15.85■□□□□ 0.13
LIMD2-203ENST00000578067 H0Y9P7 68 aa15.84■□□□□ 0.13
LIMD2-203ENST00000578067 C8orf87E5RJ46 101 aa15.84■□□□□ 0.13
LIMD2-203ENST00000578067 LINC00304Q8N9R0 145 aa15.82■□□□□ 0.12
LIMD2-203ENST00000578067 H3BPC8 53 aa15.8■□□□□ 0.12
LIMD2-203ENST00000578067 FAT1Q14517 4588 aa15.79■□□□□ 0.12
LIMD2-203ENST00000578067 NDUFS5O43920 106 aa15.79■□□□□ 0.12
LIMD2-203ENST00000578067 SPAG11AQ6PDA7 123 aa15.79■□□□□ 0.12
LIMD2-203ENST00000578067 LINC00208Q96KT6 92 aa15.79■□□□□ 0.12
LIMD2-203ENST00000578067 TRAV22A0A0B4J277 110 aa15.78■□□□□ 0.12
LIMD2-203ENST00000578067 RPS29P62273 56 aaKnown RBP15.77■□□□□ 0.11
LIMD2-203ENST00000578067 FAM229AH3BQW9 127 aa15.76■□□□□ 0.11
LIMD2-203ENST00000578067 RPS28P62857 69 aaKnown RBP15.76■□□□□ 0.11
LIMD2-203ENST00000578067 LINC00313P59037 77 aa15.75■□□□□ 0.11
LIMD2-203ENST00000578067 ATP5EP56381 51 aaPredicted RBP15.74■□□□□ 0.11
LIMD2-203ENST00000578067 RYR3Q15413 4870 aa15.74■□□□□ 0.11
LIMD2-203ENST00000578067 C1orf64Q8NEQ6 169 aa15.69■□□□□ 0.1
LIMD2-203ENST00000578067 SERP1Q9Y6X1 66 aa15.63■□□□□ 0.09
LIMD2-203ENST00000578067 Q5VSD8 79 aa15.61■□□□□ 0.09
LIMD2-203ENST00000578067 Q8N9P0 234 aaPredicted RBP15.58■□□□□ 0.08
LIMD2-203ENST00000578067 OXTP01178 125 aa15.57■□□□□ 0.08
LIMD2-203ENST00000578067 KRTAP16-1A8MUX0 517 aa15.56■□□□□ 0.08
LIMD2-203ENST00000578067 PKHD1L1Q86WI1 4243 aa15.54■□□□□ 0.08
LIMD2-203ENST00000578067 Q5W150 140 aa15.53■□□□□ 0.08
LIMD2-203ENST00000578067 KRTAP13-3Q3SY46 172 aa15.5■□□□□ 0.07
LIMD2-203ENST00000578067 HSPG2P98160 4391 aa15.5■□□□□ 0.07
LIMD2-203ENST00000578067 SPANXA2-OT1Q8N9U9 137 aa15.46■□□□□ 0.07
LIMD2-203ENST00000578067 CYP4F30PQ9H0H9 118 aa15.44■□□□□ 0.06
LIMD2-203ENST00000578067 RYR1P21817 5038 aa15.43■□□□□ 0.06
LIMD2-203ENST00000578067 PRR4Q16378 134 aa15.43■□□□□ 0.06
LIMD2-203ENST00000578067 LOC101927531A0A1B0GV80 90 aa15.43■□□□□ 0.06
LIMD2-203ENST00000578067 PCOTHQ58A44 107 aa15.41■□□□□ 0.06
LIMD2-203ENST00000578067 KRTAP10-8P60410 259 aa15.39■□□□□ 0.05
LIMD2-203ENST00000578067 KRTAP17-1Q9BYP8 105 aa15.39■□□□□ 0.05
LIMD2-203ENST00000578067 Q8N1X5 172 aa15.36■□□□□ 0.05
LIMD2-203ENST00000578067 RETNLBQ9BQ08 111 aa15.34■□□□□ 0.05
LIMD2-203ENST00000578067 IGLV7-46A0A075B6I9 117 aa15.33■□□□□ 0.04
LIMD2-203ENST00000578067 SMIM26A0A096LP01 95 aa15.27■□□□□ 0.03
LIMD2-203ENST00000578067 KIAA1109Q2LD37 5005 aa15.23■□□□□ 0.03
LIMD2-203ENST00000578067 C9orf92A6NGG3 77 aa15.23■□□□□ 0.03
LIMD2-203ENST00000578067 FLG2Q5D862 2391 aaPredicted RBP15.23■□□□□ 0.03
LIMD2-203ENST00000578067 IGKV2-30P06310 120 aa15.22■□□□□ 0.03
LIMD2-203ENST00000578067 LRP1Q07954 4544 aaKnown RBP15.2■□□□□ 0.02
LIMD2-203ENST00000578067 TNXBP22105 4242 aa15.18■□□□□ 0.02
LIMD2-203ENST00000578067 EPPK1P58107 5090 aaKnown RBP15.17■□□□□ 0.02
LIMD2-203ENST00000578067 FP248Q71RG6 208 aaPredicted RBP15.16■□□□□ 0.02
LIMD2-203ENST00000578067 C20orf166-AS1Q96NR2 134 aa15.14■□□□□ 0.01
LIMD2-203ENST00000578067 A8MUU9 505 aa15.13■□□□□ 0.01
LIMD2-203ENST00000578067 C4orf26Q17RF5 130 aa15.09■□□□□ 0.01
LIMD2-203ENST00000578067 IGKV2D-30A0A075B6S6 120 aa15.08■□□□□ 0
LIMD2-203ENST00000578067 HRES1P13985 223 aa15.08■□□□□ 0
LIMD2-203ENST00000578067 FAT3Q8TDW7 4589 aa15.08■□□□□ 0
LIMD2-203ENST00000578067 MT1HL1P0DM35 61 aa15.07■□□□□ 0
LIMD2-203ENST00000578067 COA5Q86WW8 74 aa15.04■□□□□ -0
LIMD2-203ENST00000578067 MPLKIPQ8TAP9 179 aa14.98□□□□□ -0.01
LIMD2-203ENST00000578067 C7orf65Q6ZTY9 151 aa14.96□□□□□ -0.01
LIMD2-203ENST00000578067 Q75L30 129 aa14.94□□□□□ -0.02
LIMD2-203ENST00000578067 DMAC1Q96GE9 116 aa14.92□□□□□ -0.02
LIMD2-203ENST00000578067 DMBT1Q9UGM3 2413 aaPredicted RBP14.91□□□□□ -0.02
LIMD2-203ENST00000578067 ACYP2P14621 99 aa14.89□□□□□ -0.03
LIMD2-203ENST00000578067 Q1T7F1 81 aa14.88□□□□□ -0.03
LIMD2-203ENST00000578067 KRTAP4-5Q9BYR2 181 aa14.87□□□□□ -0.03
LIMD2-203ENST00000578067 MYCBP2O75592 4640 aa14.86□□□□□ -0.03
LIMD2-203ENST00000578067 V9GYY9 64 aa14.78□□□□□ -0.04
LIMD2-203ENST00000578067 PRO0628Q9UI54 55 aa14.77□□□□□ -0.04
LIMD2-203ENST00000578067 XP32Q5T750 250 aa14.73□□□□□ -0.05
LIMD2-203ENST00000578067 SPINK7P58062 85 aa14.73□□□□□ -0.05
LIMD2-203ENST00000578067 RPL37P61927 97 aaKnown RBP14.71□□□□□ -0.05
LIMD2-203ENST00000578067 ATP11AUNQ6ZP68 121 aa14.71□□□□□ -0.05
LIMD2-203ENST00000578067 CHKB-CPT1BH3BT56 60 aa14.68□□□□□ -0.06
LIMD2-203ENST00000578067 PSPHP1O15172 72 aa14.63□□□□□ -0.07
LIMD2-203ENST00000578067 A8MUN3 132 aa14.62□□□□□ -0.07
LIMD2-203ENST00000578067 LINC01558Q9Y6Z2 57 aa14.56□□□□□ -0.08
LIMD2-203ENST00000578067 TPRXLQ17RH7 258 aa14.55□□□□□ -0.08
LIMD2-203ENST00000578067 PRR15LQ9BU68 103 aa14.52□□□□□ -0.09
LIMD2-203ENST00000578067 Q5VV11 94 aa14.48□□□□□ -0.09
LIMD2-203ENST00000578067 KRTAP3-1Q9BYR8 98 aa14.46□□□□□ -0.09
LIMD2-203ENST00000578067 BIRC6Q9NR09 4857 aa14.45□□□□□ -0.1
LIMD2-203ENST00000578067 J3QL48 77 aa14.44□□□□□ -0.1
LIMD2-203ENST00000578067 ABCA13Q86UQ4 5058 aa14.43□□□□□ -0.1
LIMD2-203ENST00000578067 COX6B2Q6YFQ2 88 aa14.41□□□□□ -0.1
LIMD2-203ENST00000578067 HERC2O95714 4834 aa14.39□□□□□ -0.11
LIMD2-203ENST00000578067 BRK1Q8WUW1 75 aa14.38□□□□□ -0.11
LIMD2-203ENST00000578067 SPTSSBQ8NFR3 76 aa14.26□□□□□ -0.13
LIMD2-203ENST00000578067 A0A1B0GU69 56 aa14.21□□□□□ -0.13
LIMD2-203ENST00000578067 A6NED7 52 aa14.16□□□□□ -0.14
LIMD2-203ENST00000578067 LRP2P98164 4655 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms