RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 MPLKIPQ8TAP9 179 aa7.46□□□□□ -1.22
RN7SL560P-201ENST00000577943 DSCR8Q96T75 97 aa7.46□□□□□ -1.22
RN7SL560P-201ENST00000577943 A0A1B0GVX0 72 aa7.45□□□□□ -1.22
RN7SL560P-201ENST00000577943 MT2AP02795 61 aa7.43□□□□□ -1.22
RN7SL560P-201ENST00000577943 USH2AO75445 5202 aa7.42□□□□□ -1.22
RN7SL560P-201ENST00000577943 M0R143 59 aa7.41□□□□□ -1.22
RN7SL560P-201ENST00000577943 C9JAW5 83 aa7.4□□□□□ -1.22
RN7SL560P-201ENST00000577943 J3KT08 172 aa7.4□□□□□ -1.22
RN7SL560P-201ENST00000577943 BAALC-AS2P0C853 105 aa7.4□□□□□ -1.22
RN7SL560P-201ENST00000577943 MTURNQ8N3F0 131 aa7.4□□□□□ -1.22
RN7SL560P-201ENST00000577943 SSPOA2VEC9 5147 aa7.4□□□□□ -1.23
RN7SL560P-201ENST00000577943 C21orf62-AS1Q17RA5 79 aa7.39□□□□□ -1.23
RN7SL560P-201ENST00000577943 ZCCHC13Q8WW36 166 aaKnown RBP7.39□□□□□ -1.23
RN7SL560P-201ENST00000577943 MT1FP04733 61 aa7.37□□□□□ -1.23
RN7SL560P-201ENST00000577943 KRTAP10-10P60014 251 aa7.37□□□□□ -1.23
RN7SL560P-201ENST00000577943 Q6ZQT0 140 aa7.37□□□□□ -1.23
RN7SL560P-201ENST00000577943 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.36□□□□□ -1.23
RN7SL560P-201ENST00000577943 NDUFB1O75438 58 aa7.36□□□□□ -1.23
RN7SL560P-201ENST00000577943 BATFQ16520 125 aa7.36□□□□□ -1.23
RN7SL560P-201ENST00000577943 SPINK7P58062 85 aa7.35□□□□□ -1.23
RN7SL560P-201ENST00000577943 KRTAP9-7A8MTY7 169 aa7.32□□□□□ -1.24
RN7SL560P-201ENST00000577943 LCE2BO14633 110 aa7.32□□□□□ -1.24
RN7SL560P-201ENST00000577943 Q8N9P0 234 aaPredicted RBP7.32□□□□□ -1.24
RN7SL560P-201ENST00000577943 KRTAP9-3Q9BYQ3 159 aa7.32□□□□□ -1.24
RN7SL560P-201ENST00000577943 JMJD7-PLA2G4BH0Y9G9 81 aa7.31□□□□□ -1.24
RN7SL560P-201ENST00000577943 ATXN8Q156A1 80 aa7.31□□□□□ -1.24
RN7SL560P-201ENST00000577943 LYRM7Q5U5X0 104 aa7.31□□□□□ -1.24
RN7SL560P-201ENST00000577943 PCP4L1A6NKN8 68 aa7.3□□□□□ -1.24
RN7SL560P-201ENST00000577943 C8orf17Q9NRJ1 99 aa7.3□□□□□ -1.24
RN7SL560P-201ENST00000577943 A8MWP4 228 aa7.29□□□□□ -1.24
RN7SL560P-201ENST00000577943 NAA38Q9BRA0 125 aaKnown RBP7.29□□□□□ -1.24
RN7SL560P-201ENST00000577943 LOC110117498A0A087WWA1 95 aa7.28□□□□□ -1.24
RN7SL560P-201ENST00000577943 A0A1B0GW54 56 aa7.28□□□□□ -1.24
RN7SL560P-201ENST00000577943 FCGBPQ9Y6R7 5405 aaPredicted RBP7.26□□□□□ -1.25
RN7SL560P-201ENST00000577943 IGKV3D-7A0A0C4DH55 119 aa7.26□□□□□ -1.25
RN7SL560P-201ENST00000577943 PDE6GP18545 87 aa7.26□□□□□ -1.25
RN7SL560P-201ENST00000577943 WFDC13Q8IUB5 93 aa7.26□□□□□ -1.25
RN7SL560P-201ENST00000577943 KRTAP19-1Q8IUB9 90 aa7.26□□□□□ -1.25
RN7SL560P-201ENST00000577943 C14orf132Q9NPU4 83 aa7.25□□□□□ -1.25
RN7SL560P-201ENST00000577943 Q6ZVQ6 151 aa7.24□□□□□ -1.25
RN7SL560P-201ENST00000577943 TAX1BP3O14907 124 aa7.22□□□□□ -1.25
RN7SL560P-201ENST00000577943 NREPQ16612 68 aa7.21□□□□□ -1.26
RN7SL560P-201ENST00000577943 PRR15Q8IV56 129 aa7.21□□□□□ -1.26
RN7SL560P-201ENST00000577943 C9orf118A6NHY6 69 aa7.19□□□□□ -1.26
RN7SL560P-201ENST00000577943 COL5A1-AS1Q5SY13 56 aa7.19□□□□□ -1.26
RN7SL560P-201ENST00000577943 TMEM254Q8TBM7 123 aa7.17□□□□□ -1.26
RN7SL560P-201ENST00000577943 MRPL34Q9BQ48 92 aaKnown RBP7.17□□□□□ -1.26
RN7SL560P-201ENST00000577943 MMP24-AS1A0A0U1RRL7 71 aa7.16□□□□□ -1.26
RN7SL560P-201ENST00000577943 A0A1W2PPM0 123 aa7.16□□□□□ -1.26
RN7SL560P-201ENST00000577943 NDUFS5O43920 106 aa7.14□□□□□ -1.27
RN7SL560P-201ENST00000577943 LINC00846Q9NV44 126 aa7.14□□□□□ -1.27
RN7SL560P-201ENST00000577943 MACF1Q9UPN3 7388 aaKnown RBP7.13□□□□□ -1.27
RN7SL560P-201ENST00000577943 hDV103S1A0JD37 113 aa7.13□□□□□ -1.27
RN7SL560P-201ENST00000577943 K7EQZ3 153 aa7.12□□□□□ -1.27
RN7SL560P-201ENST00000577943 H1FX-AS1Q4G0G2 97 aa7.1□□□□□ -1.27
RN7SL560P-201ENST00000577943 SPCS1Q9Y6A9 102 aa7.09□□□□□ -1.27
RN7SL560P-201ENST00000577943 KRTAP19-6Q3LI70 58 aa7.08□□□□□ -1.28
RN7SL560P-201ENST00000577943 IGKV2D-30A0A075B6S6 120 aa7.07□□□□□ -1.28
RN7SL560P-201ENST00000577943 H3BT86 120 aa7.07□□□□□ -1.28
RN7SL560P-201ENST00000577943 IGKV2-30P06310 120 aa7.07□□□□□ -1.28
RN7SL560P-201ENST00000577943 BPY2O14599 106 aa7.06□□□□□ -1.28
RN7SL560P-201ENST00000577943 K7EP34 96 aa7.04□□□□□ -1.28
RN7SL560P-201ENST00000577943 C7orf65Q6ZTY9 151 aa7.04□□□□□ -1.28
RN7SL560P-201ENST00000577943 SYNE2Q8WXH0 6885 aaKnown RBP7.03□□□□□ -1.28
RN7SL560P-201ENST00000577943 Q5W150 140 aa7.02□□□□□ -1.29
RN7SL560P-201ENST00000577943 CASC2Q6XLA1 102 aa6.99□□□□□ -1.29
RN7SL560P-201ENST00000577943 GTF2H5Q6ZYL4 71 aa6.99□□□□□ -1.29
RN7SL560P-201ENST00000577943 Q8N9L7 120 aa6.99□□□□□ -1.29
RN7SL560P-201ENST00000577943 HCG22E2RYF7 251 aa6.98□□□□□ -1.29
RN7SL560P-201ENST00000577943 SMCPP49901 116 aaPredicted RBP6.96□□□□□ -1.3
RN7SL560P-201ENST00000577943 PRO0461Q9UI25 63 aa6.96□□□□□ -1.3
RN7SL560P-201ENST00000577943 C4orf26Q17RF5 130 aa6.95□□□□□ -1.3
RN7SL560P-201ENST00000577943 CXCL6P80162 114 aa6.92□□□□□ -1.3
RN7SL560P-201ENST00000577943 A0A1B0GV90 55 aa6.91□□□□□ -1.3
RN7SL560P-201ENST00000577943 F8W1H4 67 aa6.88□□□□□ -1.31
RN7SL560P-201ENST00000577943 C5orf47Q569G3 176 aa6.88□□□□□ -1.31
RN7SL560P-201ENST00000577943 UBL5Q9BZL1 73 aa6.87□□□□□ -1.31
RN7SL560P-201ENST00000577943 FAM236AA0A1B0GUQ0 79 aa6.86□□□□□ -1.31
RN7SL560P-201ENST00000577943 FAM236BA0A1B0GV22 79 aa6.86□□□□□ -1.31
RN7SL560P-201ENST00000577943 ETDBQ3ZM63 59 aa6.84□□□□□ -1.31
RN7SL560P-201ENST00000577943 KRTAP6-3Q3LI67 103 aa6.83□□□□□ -1.32
RN7SL560P-201ENST00000577943 S4R3F8 94 aa6.83□□□□□ -1.32
RN7SL560P-201ENST00000577943 C1orf64Q8NEQ6 169 aa6.81□□□□□ -1.32
RN7SL560P-201ENST00000577943 KRTAP3-1Q9BYR8 98 aa6.81□□□□□ -1.32
RN7SL560P-201ENST00000577943 CSAG1Q6PB30 78 aa6.79□□□□□ -1.32
RN7SL560P-201ENST00000577943 LCA10Q71F78 164 aa6.77□□□□□ -1.33
RN7SL560P-201ENST00000577943 TP53AIP1Q9HCN2 124 aa6.75□□□□□ -1.33
RN7SL560P-201ENST00000577943 A6NN06 94 aa6.74□□□□□ -1.33
RN7SL560P-201ENST00000577943 Q5VV11 94 aa6.74□□□□□ -1.33
RN7SL560P-201ENST00000577943 MT1BP07438 61 aa6.73□□□□□ -1.33
RN7SL560P-201ENST00000577943 SPRR2GQ9BYE4 73 aa6.71□□□□□ -1.34
RN7SL560P-201ENST00000577943 KRTAP19-8Q3LI54 63 aa6.69□□□□□ -1.34
RN7SL560P-201ENST00000577943 KLKP1Q107X0 134 aa6.67□□□□□ -1.34
RN7SL560P-201ENST00000577943 ACYP1P07311 99 aa6.64□□□□□ -1.35
RN7SL560P-201ENST00000577943 CYP4F30PQ9H0H9 118 aa6.64□□□□□ -1.35
RN7SL560P-201ENST00000577943 FAM240AA0A1B0GVK7 77 aa6.63□□□□□ -1.35
RN7SL560P-201ENST00000577943 KRTAP3-3Q9BYR6 98 aa6.63□□□□□ -1.35
RN7SL560P-201ENST00000577943 KRTAP10-5P60370 271 aa6.61□□□□□ -1.35
RN7SL560P-201ENST00000577943 TRAV22A0A0B4J277 110 aa6.6□□□□□ -1.35
RN7SL560P-201ENST00000577943 MUC12Q9UKN1 5478 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms