RNA–Protein interactions for RNA: ENST00000577706.1

TOP2A-203, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-203ENST00000577706 NSD1Q96L73 2696 aaPredicted RBP0.3□□□□□ -2.36
TOP2A-203ENST00000577706 MROH2BQ7Z745 1585 aa0.3□□□□□ -2.36
TOP2A-203ENST00000577706 PRRC2CQ9Y520 2896 aaKnown RBP0.3□□□□□ -2.36
TOP2A-203ENST00000577706 SPTA1P02549 2419 aa0.29□□□□□ -2.36
TOP2A-203ENST00000577706 STAB1Q9NY15 2570 aa0.29□□□□□ -2.36
TOP2A-203ENST00000577706 MYCBP2O75592 4640 aa0.29□□□□□ -2.36
TOP2A-203ENST00000577706 HIVEP3Q5T1R4 2406 aa0.28□□□□□ -2.36
TOP2A-203ENST00000577706 HRNRQ86YZ3 2850 aaPredicted RBP0.28□□□□□ -2.36
TOP2A-203ENST00000577706 LYSTQ99698 3801 aa0.28□□□□□ -2.36
TOP2A-203ENST00000577706 C9orf92A6NGG3 77 aa0.28□□□□□ -2.36
TOP2A-203ENST00000577706 SPRR2BP35325 72 aa0.28□□□□□ -2.36
TOP2A-203ENST00000577706 CHD8Q9HCK8 2581 aa0.28□□□□□ -2.37
TOP2A-203ENST00000577706 HUWE1Q7Z6Z7 4374 aaKnown RBP0.27□□□□□ -2.37
TOP2A-203ENST00000577706 FAT4Q6V0I7 4981 aa0.27□□□□□ -2.37
TOP2A-203ENST00000577706 CREBBPQ92793 2442 aa0.27□□□□□ -2.37
TOP2A-203ENST00000577706 PKD1L2Q7Z442 2459 aa0.27□□□□□ -2.37
TOP2A-203ENST00000577706 PKD1L1Q8TDX9 2849 aa0.27□□□□□ -2.37
TOP2A-203ENST00000577706 LPAP08519 4548 aa0.26□□□□□ -2.37
TOP2A-203ENST00000577706 CEP290O15078 2479 aa0.26□□□□□ -2.37
TOP2A-203ENST00000577706 DEFB104AQ8WTQ1 72 aa0.26□□□□□ -2.37
TOP2A-203ENST00000577706 MAP1BP46821 2468 aaKnown RBP0.26□□□□□ -2.37
TOP2A-203ENST00000577706 PDZD2O15018 2839 aa0.26□□□□□ -2.37
TOP2A-203ENST00000577706 HSPG2P98160 4391 aa0.25□□□□□ -2.37
TOP2A-203ENST00000577706 TNP1P09430 55 aa0.25□□□□□ -2.37
TOP2A-203ENST00000577706 PTPN13Q12923 2485 aa0.25□□□□□ -2.37
TOP2A-203ENST00000577706 ACANP16112 2415 aa0.25□□□□□ -2.37
TOP2A-203ENST00000577706 SETXQ7Z333 2677 aaKnown RBP0.24□□□□□ -2.37
TOP2A-203ENST00000577706 TOMM7Q9P0U1 55 aa0.24□□□□□ -2.37
TOP2A-203ENST00000577706 VPS13BQ7Z7G8 4022 aa0.23□□□□□ -2.37
TOP2A-203ENST00000577706 M0QZ58 72 aa0.23□□□□□ -2.37
TOP2A-203ENST00000577706 USP24Q9UPU5 2620 aa0.23□□□□□ -2.37
TOP2A-203ENST00000577706 KMT2AQ03164 3969 aa0.23□□□□□ -2.37
TOP2A-203ENST00000577706 GCN1Q92616 2671 aaKnown RBP0.22□□□□□ -2.37
TOP2A-203ENST00000577706 SPTBN4Q9H254 2564 aa0.22□□□□□ -2.37
TOP2A-203ENST00000577706 NCOR2Q9Y618 2525 aa0.22□□□□□ -2.37
TOP2A-203ENST00000577706 HMCN2Q8NDA2 5059 aa0.22□□□□□ -2.37
TOP2A-203ENST00000577706 SACSQ9NZJ4 4579 aa0.21□□□□□ -2.38
TOP2A-203ENST00000577706 DNAH11Q96DT5 4516 aa0.21□□□□□ -2.38
TOP2A-203ENST00000577706 CUBNO60494 3623 aa0.21□□□□□ -2.38
TOP2A-203ENST00000577706 PKD1P98161 4303 aa0.21□□□□□ -2.38
TOP2A-203ENST00000577706 NBASA2RRP1 2371 aa0.2□□□□□ -2.38
TOP2A-203ENST00000577706 LRP1BQ9NZR2 4599 aa0.19□□□□□ -2.38
TOP2A-203ENST00000577706 GCC2Q8IWJ2 1684 aa0.19□□□□□ -2.38
TOP2A-203ENST00000577706 SPRR2AP35326 72 aa0.19□□□□□ -2.38
TOP2A-203ENST00000577706 TTTY10Q9BZA0 68 aa0.19□□□□□ -2.38
TOP2A-203ENST00000577706 DMXL1Q9Y485 3027 aa0.19□□□□□ -2.38
TOP2A-203ENST00000577706 SONP18583 2426 aaKnown RBP0.18□□□□□ -2.38
TOP2A-203ENST00000577706 ARHGAP5-AS1Q96IT6 56 aa0.18□□□□□ -2.38
TOP2A-203ENST00000577706 WNK1Q9H4A3 2382 aa0.18□□□□□ -2.38
TOP2A-203ENST00000577706 ANK3Q12955 4377 aaKnown RBP0.17□□□□□ -2.38
TOP2A-203ENST00000577706 NF1P21359 2839 aa0.17□□□□□ -2.38
TOP2A-203ENST00000577706 FLNBO75369 2602 aaKnown RBP0.17□□□□□ -2.38
TOP2A-203ENST00000577706 APOBP04114 4563 aaKnown RBP0.17□□□□□ -2.38
TOP2A-203ENST00000577706 SPART-AS1P0CW21 52 aa0.17□□□□□ -2.38
TOP2A-203ENST00000577706 SPRR2EP22531 72 aa0.17□□□□□ -2.38
TOP2A-203ENST00000577706 NAV2Q8IVL1 2488 aa0.17□□□□□ -2.38
TOP2A-203ENST00000577706 APC2O95996 2303 aa0.16□□□□□ -2.38
TOP2A-203ENST00000577706 COL7A1Q02388 2944 aa0.16□□□□□ -2.38
TOP2A-203ENST00000577706 SRRM2Q9UQ35 2752 aaKnown RBP0.16□□□□□ -2.38
TOP2A-203ENST00000577706 SVEP1Q4LDE5 3571 aa0.16□□□□□ -2.38
TOP2A-203ENST00000577706 MT1AP04731 61 aa0.16□□□□□ -2.38
TOP2A-203ENST00000577706 SPRR2FQ96RM1 72 aa0.16□□□□□ -2.38
TOP2A-203ENST00000577706 FLNCQ14315 2725 aa0.16□□□□□ -2.38
TOP2A-203ENST00000577706 HECTD4Q9Y4D8 3996 aa0.15□□□□□ -2.38
TOP2A-203ENST00000577706 DNAH9Q9NYC9 4486 aa0.15□□□□□ -2.38
TOP2A-203ENST00000577706 PKHD1P08F94 4074 aa0.15□□□□□ -2.38
TOP2A-203ENST00000577706 DMBT1Q9UGM3 2413 aaPredicted RBP0.15□□□□□ -2.39
TOP2A-203ENST00000577706 SMR3BP02814 79 aaPredicted RBP0.15□□□□□ -2.39
TOP2A-203ENST00000577706 KRTAP19-5Q3LI72 72 aa0.15□□□□□ -2.39
TOP2A-203ENST00000577706 PKHD1L1Q86WI1 4243 aa0.14□□□□□ -2.39
TOP2A-203ENST00000577706 H3BSH0 61 aa0.14□□□□□ -2.39
TOP2A-203ENST00000577706 KRTAP8-1Q8IUC2 63 aa0.14□□□□□ -2.39
TOP2A-203ENST00000577706 SETD2Q9BYW2 2564 aaPredicted RBP0.14□□□□□ -2.39
TOP2A-203ENST00000577706 TENM2Q9NT68 2774 aa0.13□□□□□ -2.39
TOP2A-203ENST00000577706 TACC2O95359 2948 aa0.13□□□□□ -2.39
TOP2A-203ENST00000577706 ANKHD1Q8IWZ3 2542 aaKnown RBP0.13□□□□□ -2.39
TOP2A-203ENST00000577706 DNAH2Q9P225 4427 aa0.12□□□□□ -2.39
TOP2A-203ENST00000577706 COL6A3P12111 3177 aa0.12□□□□□ -2.39
TOP2A-203ENST00000577706 SPRR2GQ9BYE4 73 aa0.12□□□□□ -2.39
TOP2A-203ENST00000577706 LRP2P98164 4655 aa0.12□□□□□ -2.39
TOP2A-203ENST00000577706 MAST4O15021 2626 aa0.12□□□□□ -2.39
TOP2A-203ENST00000577706 TEP1Q99973 2627 aaKnown RBP0.11□□□□□ -2.39
TOP2A-203ENST00000577706 COL6A5A8TX70 2615 aa0.11□□□□□ -2.39
TOP2A-203ENST00000577706 RANBP2P49792 3224 aaKnown RBP0.11□□□□□ -2.39
TOP2A-203ENST00000577706 FASNP49327 2511 aaKnown RBP0.11□□□□□ -2.39
TOP2A-203ENST00000577706 DNAH3Q8TD57 4116 aa0.1□□□□□ -2.39
TOP2A-203ENST00000577706 MTORP42345 2549 aa0.1□□□□□ -2.39
TOP2A-203ENST00000577706 FAT3Q8TDW7 4589 aa0.1□□□□□ -2.39
TOP2A-203ENST00000577706 VPS13DQ5THJ4 4388 aa0.09□□□□□ -2.39
TOP2A-203ENST00000577706 FLGP20930 4061 aaPredicted RBP0.09□□□□□ -2.39
TOP2A-203ENST00000577706 IGSF10Q6WRI0 2623 aa0.09□□□□□ -2.4
TOP2A-203ENST00000577706 UTP20O75691 2785 aaKnown RBP0.09□□□□□ -2.4
TOP2A-203ENST00000577706 TRIOO75962 3097 aa0.09□□□□□ -2.4
TOP2A-203ENST00000577706 LAMA1P25391 3075 aa0.09□□□□□ -2.4
TOP2A-203ENST00000577706 ANKRD11Q6UB99 2663 aaPredicted RBP0.09□□□□□ -2.4
TOP2A-203ENST00000577706 ZANQ9Y493 2812 aa0.09□□□□□ -2.4
TOP2A-203ENST00000577706 DCHS2Q6V1P9 2916 aa0.08□□□□□ -2.4
TOP2A-203ENST00000577706 ACACBO00763 2458 aa0.08□□□□□ -2.4
TOP2A-203ENST00000577706 A0A0C4DFX4 3053 aa0.08□□□□□ -2.4
TOP2A-203ENST00000577706 ZZEF1O43149 2961 aa0.08□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms