RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 CMYA5Q8N3K9 4069 aa3.24□□□□□ -1.89
VAPA-203ENST00000577539 DNAH10Q8IVF4 4471 aa3.24□□□□□ -1.89
VAPA-203ENST00000577539 LCE6AA0A183 80 aa3.24□□□□□ -1.89
VAPA-203ENST00000577539 hDV103S1A0JD37 113 aa3.24□□□□□ -1.89
VAPA-203ENST00000577539 PSPHP1O15172 72 aa3.24□□□□□ -1.89
VAPA-203ENST00000577539 LY6G6CO95867 125 aa3.24□□□□□ -1.89
VAPA-203ENST00000577539 TRAV22A0A0B4J277 110 aa3.23□□□□□ -1.89
VAPA-203ENST00000577539 KRTAP29-1A8MX34 341 aaPredicted RBP3.23□□□□□ -1.89
VAPA-203ENST00000577539 PCOTHQ58A44 107 aa3.23□□□□□ -1.89
VAPA-203ENST00000577539 ZNF706Q9Y5V0 76 aaPredicted RBP3.23□□□□□ -1.89
VAPA-203ENST00000577539 TGP01266 2768 aa3.22□□□□□ -1.89
VAPA-203ENST00000577539 C1orf134Q5TEV5 83 aa3.22□□□□□ -1.89
VAPA-203ENST00000577539 KRTAP13-1Q8IUC0 172 aa3.22□□□□□ -1.89
VAPA-203ENST00000577539 CIRBP-AS1Q8TBR5 109 aa3.22□□□□□ -1.89
VAPA-203ENST00000577539 DNAH3Q8TD57 4116 aa3.21□□□□□ -1.9
VAPA-203ENST00000577539 MMP24-AS1A0A0U1RRL7 71 aa3.21□□□□□ -1.9
VAPA-203ENST00000577539 ZNF861PO60384 105 aa3.21□□□□□ -1.9
VAPA-203ENST00000577539 LINC00313P59037 77 aa3.2□□□□□ -1.9
VAPA-203ENST00000577539 C8orf17Q9NRJ1 99 aa3.2□□□□□ -1.9
VAPA-203ENST00000577539 DNAH9Q9NYC9 4486 aa3.19□□□□□ -1.9
VAPA-203ENST00000577539 H3BPC8 53 aa3.19□□□□□ -1.9
VAPA-203ENST00000577539 CYP4F30PQ9H0H9 118 aa3.19□□□□□ -1.9
VAPA-203ENST00000577539 LYSTQ99698 3801 aa3.19□□□□□ -1.9
VAPA-203ENST00000577539 A0A1B0GVX0 72 aa3.18□□□□□ -1.9
VAPA-203ENST00000577539 PLAC8Q9NZF1 115 aa3.18□□□□□ -1.9
VAPA-203ENST00000577539 DNAH1Q9P2D7 4330 aa3.18□□□□□ -1.9
VAPA-203ENST00000577539 Q6ZR54 194 aa3.18□□□□□ -1.9
VAPA-203ENST00000577539 A8MUN3 132 aa3.17□□□□□ -1.9
VAPA-203ENST00000577539 LINC00483Q53H64 154 aa3.17□□□□□ -1.9
VAPA-203ENST00000577539 Q96NJ1 140 aa3.17□□□□□ -1.9
VAPA-203ENST00000577539 IGLV7-43P04211 117 aa3.17□□□□□ -1.9
VAPA-203ENST00000577539 MRPL34Q9BQ48 92 aaKnown RBP3.17□□□□□ -1.9
VAPA-203ENST00000577539 TP53AIP1Q9HCN2 124 aa3.17□□□□□ -1.9
VAPA-203ENST00000577539 LCE1AQ5T7P2 110 aa3.16□□□□□ -1.9
VAPA-203ENST00000577539 Q8N9P0 234 aaPredicted RBP3.16□□□□□ -1.9
VAPA-203ENST00000577539 PLECQ15149 4684 aaKnown RBP3.16□□□□□ -1.9
VAPA-203ENST00000577539 SPANXA2-OT1Q8N9U9 137 aa3.16□□□□□ -1.9
VAPA-203ENST00000577539 RETNLBQ9BQ08 111 aa3.16□□□□□ -1.9
VAPA-203ENST00000577539 Q1T7F1 81 aa3.15□□□□□ -1.9
VAPA-203ENST00000577539 PRR15LQ9BU68 103 aa3.15□□□□□ -1.9
VAPA-203ENST00000577539 COA5Q86WW8 74 aa3.15□□□□□ -1.9
VAPA-203ENST00000577539 CHKB-CPT1BH3BT56 60 aa3.15□□□□□ -1.91
VAPA-203ENST00000577539 FBN3Q75N90 2809 aa3.14□□□□□ -1.91
VAPA-203ENST00000577539 MEGF8Q7Z7M0 2845 aa3.14□□□□□ -1.91
VAPA-203ENST00000577539 KTN1-AS1Q86SY8 53 aa3.14□□□□□ -1.91
VAPA-203ENST00000577539 KRTAP4-8A0A0G2JLE6 195 aa3.13□□□□□ -1.91
VAPA-203ENST00000577539 IGLV7-46A0A075B6I9 117 aa3.13□□□□□ -1.91
VAPA-203ENST00000577539 SPAG11AQ6PDA7 123 aa3.13□□□□□ -1.91
VAPA-203ENST00000577539 DNAH7Q8WXX0 4024 aa3.12□□□□□ -1.91
VAPA-203ENST00000577539 SSBP3-AS1Q7Z2R9 100 aa3.12□□□□□ -1.91
VAPA-203ENST00000577539 LIMD2Q9BT23 127 aa3.12□□□□□ -1.91
VAPA-203ENST00000577539 LCE1DQ5T752 114 aa3.12□□□□□ -1.91
VAPA-203ENST00000577539 A6NED7 52 aa3.11□□□□□ -1.91
VAPA-203ENST00000577539 ASB16-AS1Q495Z4 193 aa3.11□□□□□ -1.91
VAPA-203ENST00000577539 Q5W150 140 aa3.11□□□□□ -1.91
VAPA-203ENST00000577539 SPTSSBQ8NFR3 76 aa3.11□□□□□ -1.91
VAPA-203ENST00000577539 KRTAP10-1P60331 282 aa3.1□□□□□ -1.91
VAPA-203ENST00000577539 Q5VV11 94 aa3.1□□□□□ -1.91
VAPA-203ENST00000577539 STARD9Q9P2P6 4700 aa3.1□□□□□ -1.91
VAPA-203ENST00000577539 LOC101927531A0A1B0GV80 90 aa3.1□□□□□ -1.91
VAPA-203ENST00000577539 A8MU10 97 aa3.09□□□□□ -1.91
VAPA-203ENST00000577539 PRKDCP78527 4128 aaKnown RBP3.09□□□□□ -1.91
VAPA-203ENST00000577539 HRES1P13985 223 aa3.09□□□□□ -1.92
VAPA-203ENST00000577539 VPS13DQ5THJ4 4388 aa3.08□□□□□ -1.92
VAPA-203ENST00000577539 KRTAP13-2Q52LG2 175 aa3.08□□□□□ -1.92
VAPA-203ENST00000577539 IGKV2D-30A0A075B6S6 120 aa3.07□□□□□ -1.92
VAPA-203ENST00000577539 IGKV2-30P06310 120 aa3.07□□□□□ -1.92
VAPA-203ENST00000577539 LCA10Q71F78 164 aa3.07□□□□□ -1.92
VAPA-203ENST00000577539 KMT2AQ03164 3969 aa3.06□□□□□ -1.92
VAPA-203ENST00000577539 TYMSOSQ8TAI1 123 aa3.06□□□□□ -1.92
VAPA-203ENST00000577539 DYNC2H1Q8NCM8 4307 aaKnown RBP3.06□□□□□ -1.92
VAPA-203ENST00000577539 ACYP2P14621 99 aa3.06□□□□□ -1.92
VAPA-203ENST00000577539 DNAH8Q96JB1 4490 aa3.05□□□□□ -1.92
VAPA-203ENST00000577539 SMR3BP02814 79 aaPredicted RBP3.05□□□□□ -1.92
VAPA-203ENST00000577539 DNAH17Q9UFH2 4485 aa3.04□□□□□ -1.92
VAPA-203ENST00000577539 ADM2Q7Z4H4 148 aa3.04□□□□□ -1.92
VAPA-203ENST00000577539 LINC01558Q9Y6Z2 57 aa3.04□□□□□ -1.92
VAPA-203ENST00000577539 Q6ZSA8 131 aa3.03□□□□□ -1.92
VAPA-203ENST00000577539 KRTAP4-9Q9BYQ8 210 aa3.03□□□□□ -1.92
VAPA-203ENST00000577539 LINC01554Q52M75 96 aa3.03□□□□□ -1.92
VAPA-203ENST00000577539 KRTAP13-3Q3SY46 172 aa3.03□□□□□ -1.92
VAPA-203ENST00000577539 DNHD1Q96M86 4753 aa3.03□□□□□ -1.93
VAPA-203ENST00000577539 DNAH2Q9P225 4427 aa3.03□□□□□ -1.93
VAPA-203ENST00000577539 DNAH11Q96DT5 4516 aa3.03□□□□□ -1.93
VAPA-203ENST00000577539 FRAS1Q86XX4 4008 aa3.02□□□□□ -1.93
VAPA-203ENST00000577539 KRTAP1-4P0C5Y4 121 aa3.02□□□□□ -1.93
VAPA-203ENST00000577539 SPINK7P58062 85 aa3.02□□□□□ -1.93
VAPA-203ENST00000577539 SPINK1P00995 79 aa3.01□□□□□ -1.93
VAPA-203ENST00000577539 KRTAP4-11Q9BYQ6 195 aa3.01□□□□□ -1.93
VAPA-203ENST00000577539 HECTD4Q9Y4D8 3996 aa3.01□□□□□ -1.93
VAPA-203ENST00000577539 KRTAP16-1A8MUX0 517 aa3.01□□□□□ -1.93
VAPA-203ENST00000577539 C7orf65Q6ZTY9 151 aa3.01□□□□□ -1.93
VAPA-203ENST00000577539 LINC00304Q8N9R0 145 aa3.01□□□□□ -1.93
VAPA-203ENST00000577539 CDC42SE1Q9NRR8 79 aa3□□□□□ -1.93
VAPA-203ENST00000577539 A0A1B0GU69 56 aa3□□□□□ -1.93
VAPA-203ENST00000577539 DMAC1Q96GE9 116 aa3□□□□□ -1.93
VAPA-203ENST00000577539 ATP11AUNQ6ZP68 121 aa3□□□□□ -1.93
VAPA-203ENST00000577539 C9orf92A6NGG3 77 aa2.99□□□□□ -1.93
VAPA-203ENST00000577539 KRTAP4-7Q9BYR0 210 aa2.99□□□□□ -1.93
VAPA-203ENST00000577539 DNAH6Q9C0G6 4158 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms