RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 J3KT08 172 aa7.95□□□□□ -1.14
SF3B3-215ENST00000577085 LYRM7Q5U5X0 104 aa7.94□□□□□ -1.14
SF3B3-215ENST00000577085 FLGP20930 4061 aaPredicted RBP7.93□□□□□ -1.14
SF3B3-215ENST00000577085 FSIP2Q5CZC0 6907 aa7.93□□□□□ -1.14
SF3B3-215ENST00000577085 FAM236DA0A1B0GTK5 79 aa7.93□□□□□ -1.14
SF3B3-215ENST00000577085 FAM236CP0DP71 79 aa7.93□□□□□ -1.14
SF3B3-215ENST00000577085 TSTD3H0UI37 97 aa7.92□□□□□ -1.14
SF3B3-215ENST00000577085 NDUFB1O75438 58 aa7.92□□□□□ -1.14
SF3B3-215ENST00000577085 Q6ZQT0 140 aa7.92□□□□□ -1.14
SF3B3-215ENST00000577085 CRCT1Q9UGL9 99 aa7.91□□□□□ -1.14
SF3B3-215ENST00000577085 PDE6GP18545 87 aa7.9□□□□□ -1.14
SF3B3-215ENST00000577085 BATFQ16520 125 aa7.9□□□□□ -1.14
SF3B3-215ENST00000577085 RBM12B-AS1Q9P1G2 102 aa7.9□□□□□ -1.14
SF3B3-215ENST00000577085 LOC110117498A0A087WWA1 95 aa7.88□□□□□ -1.15
SF3B3-215ENST00000577085 A0A1B0GW54 56 aa7.88□□□□□ -1.15
SF3B3-215ENST00000577085 C14orf132Q9NPU4 83 aa7.86□□□□□ -1.15
SF3B3-215ENST00000577085 A8MWP4 228 aa7.83□□□□□ -1.16
SF3B3-215ENST00000577085 MTURNQ8N3F0 131 aa7.82□□□□□ -1.16
SF3B3-215ENST00000577085 ZCCHC13Q8WW36 166 aaKnown RBP7.82□□□□□ -1.16
SF3B3-215ENST00000577085 NREPQ16612 68 aa7.81□□□□□ -1.16
SF3B3-215ENST00000577085 HRES1P13985 223 aa7.8□□□□□ -1.16
SF3B3-215ENST00000577085 C8orf17Q9NRJ1 99 aa7.79□□□□□ -1.16
SF3B3-215ENST00000577085 Q8N9P0 234 aaPredicted RBP7.77□□□□□ -1.17
SF3B3-215ENST00000577085 IGKV3D-7A0A0C4DH55 119 aa7.76□□□□□ -1.17
SF3B3-215ENST00000577085 C9orf118A6NHY6 69 aa7.76□□□□□ -1.17
SF3B3-215ENST00000577085 SPINK7P58062 85 aa7.76□□□□□ -1.17
SF3B3-215ENST00000577085 MPLKIPQ8TAP9 179 aa7.76□□□□□ -1.17
SF3B3-215ENST00000577085 H3BT86 120 aa7.75□□□□□ -1.17
SF3B3-215ENST00000577085 Q6ZVQ6 151 aa7.75□□□□□ -1.17
SF3B3-215ENST00000577085 A0A1W2PPM0 123 aa7.74□□□□□ -1.17
SF3B3-215ENST00000577085 PRR15Q8IV56 129 aa7.74□□□□□ -1.17
SF3B3-215ENST00000577085 KRTAP9-8Q9BYQ0 159 aa7.72□□□□□ -1.17
SF3B3-215ENST00000577085 LOC105371267A0A1B0GV96 52 aa7.7□□□□□ -1.18
SF3B3-215ENST00000577085 TAX1BP3O14907 124 aa7.7□□□□□ -1.18
SF3B3-215ENST00000577085 NDUFS5O43920 106 aa7.68□□□□□ -1.18
SF3B3-215ENST00000577085 TMEM254Q8TBM7 123 aa7.68□□□□□ -1.18
SF3B3-215ENST00000577085 MRPL34Q9BQ48 92 aaKnown RBP7.68□□□□□ -1.18
SF3B3-215ENST00000577085 WFDC13Q8IUB5 93 aa7.67□□□□□ -1.18
SF3B3-215ENST00000577085 MMP24-AS1A0A0U1RRL7 71 aa7.66□□□□□ -1.18
SF3B3-215ENST00000577085 hDV103S1A0JD37 113 aa7.66□□□□□ -1.18
SF3B3-215ENST00000577085 K7EQZ3 153 aa7.66□□□□□ -1.18
SF3B3-215ENST00000577085 BPY2O14599 106 aa7.66□□□□□ -1.18
SF3B3-215ENST00000577085 SPCS1Q9Y6A9 102 aa7.65□□□□□ -1.18
SF3B3-215ENST00000577085 MT2AP02795 61 aa7.62□□□□□ -1.19
SF3B3-215ENST00000577085 KRTAP10-10P60014 251 aa7.61□□□□□ -1.19
SF3B3-215ENST00000577085 COL5A1-AS1Q5SY13 56 aa7.57□□□□□ -1.2
SF3B3-215ENST00000577085 MT1FP04733 61 aa7.56□□□□□ -1.2
SF3B3-215ENST00000577085 CASC2Q6XLA1 102 aa7.55□□□□□ -1.2
SF3B3-215ENST00000577085 IGKV2D-30A0A075B6S6 120 aa7.54□□□□□ -1.2
SF3B3-215ENST00000577085 IGKV2-30P06310 120 aa7.54□□□□□ -1.2
SF3B3-215ENST00000577085 Q8N9L7 120 aa7.54□□□□□ -1.2
SF3B3-215ENST00000577085 UBL5Q9BZL1 73 aa7.53□□□□□ -1.2
SF3B3-215ENST00000577085 SMCPP49901 116 aaPredicted RBP7.52□□□□□ -1.21
SF3B3-215ENST00000577085 C7orf65Q6ZTY9 151 aa7.51□□□□□ -1.21
SF3B3-215ENST00000577085 USH2AO75445 5202 aa7.51□□□□□ -1.21
SF3B3-215ENST00000577085 HCG22E2RYF7 251 aa7.5□□□□□ -1.21
SF3B3-215ENST00000577085 K7EP34 96 aa7.49□□□□□ -1.21
SF3B3-215ENST00000577085 H1FX-AS1Q4G0G2 97 aa7.49□□□□□ -1.21
SF3B3-215ENST00000577085 Q5W150 140 aa7.47□□□□□ -1.21
SF3B3-215ENST00000577085 KRTAP9-3Q9BYQ3 159 aa7.47□□□□□ -1.21
SF3B3-215ENST00000577085 LINC00846Q9NV44 126 aa7.47□□□□□ -1.21
SF3B3-215ENST00000577085 CXCL6P80162 114 aa7.46□□□□□ -1.22
SF3B3-215ENST00000577085 GTF2H5Q6ZYL4 71 aa7.45□□□□□ -1.22
SF3B3-215ENST00000577085 PRO0461Q9UI25 63 aa7.45□□□□□ -1.22
SF3B3-215ENST00000577085 LCE2BO14633 110 aa7.44□□□□□ -1.22
SF3B3-215ENST00000577085 SSPOA2VEC9 5147 aa7.42□□□□□ -1.22
SF3B3-215ENST00000577085 F8W1H4 67 aa7.38□□□□□ -1.23
SF3B3-215ENST00000577085 C4orf26Q17RF5 130 aa7.38□□□□□ -1.23
SF3B3-215ENST00000577085 PCP4L1A6NKN8 68 aa7.37□□□□□ -1.23
SF3B3-215ENST00000577085 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.35□□□□□ -1.23
SF3B3-215ENST00000577085 KRTAP19-1Q8IUB9 90 aa7.35□□□□□ -1.23
SF3B3-215ENST00000577085 ETDBQ3ZM63 59 aa7.33□□□□□ -1.24
SF3B3-215ENST00000577085 TP53AIP1Q9HCN2 124 aa7.33□□□□□ -1.24
SF3B3-215ENST00000577085 FCGBPQ9Y6R7 5405 aaPredicted RBP7.28□□□□□ -1.24
SF3B3-215ENST00000577085 KRTAP9-7A8MTY7 169 aa7.27□□□□□ -1.25
SF3B3-215ENST00000577085 C5orf47Q569G3 176 aa7.26□□□□□ -1.25
SF3B3-215ENST00000577085 C1orf64Q8NEQ6 169 aa7.25□□□□□ -1.25
SF3B3-215ENST00000577085 S4R3F8 94 aa7.25□□□□□ -1.25
SF3B3-215ENST00000577085 FAM236AA0A1B0GUQ0 79 aa7.23□□□□□ -1.25
SF3B3-215ENST00000577085 FAM236BA0A1B0GV22 79 aa7.23□□□□□ -1.25
SF3B3-215ENST00000577085 ACYP1P07311 99 aa7.21□□□□□ -1.26
SF3B3-215ENST00000577085 KRTAP19-6Q3LI70 58 aa7.2□□□□□ -1.26
SF3B3-215ENST00000577085 CSAG1Q6PB30 78 aa7.2□□□□□ -1.26
SF3B3-215ENST00000577085 KRTAP3-1Q9BYR8 98 aa7.18□□□□□ -1.26
SF3B3-215ENST00000577085 LCA10Q71F78 164 aa7.16□□□□□ -1.26
SF3B3-215ENST00000577085 TRAV22A0A0B4J277 110 aa7.15□□□□□ -1.26
SF3B3-215ENST00000577085 HIST1H4AP62805 103 aaKnown RBP7.15□□□□□ -1.26
SF3B3-215ENST00000577085 ATP5EP2Q5VTU8 51 aa7.15□□□□□ -1.26
SF3B3-215ENST00000577085 CYP4F30PQ9H0H9 118 aa7.14□□□□□ -1.27
SF3B3-215ENST00000577085 FAM240AA0A1B0GVK7 77 aa7.13□□□□□ -1.27
SF3B3-215ENST00000577085 LOC101927531A0A1B0GV80 90 aa7.12□□□□□ -1.27
SF3B3-215ENST00000577085 MACF1Q9UPN3 7388 aaKnown RBP7.08□□□□□ -1.28
SF3B3-215ENST00000577085 UQCRQO14949 82 aa7.07□□□□□ -1.28
SF3B3-215ENST00000577085 ATOX1O00244 68 aa7.06□□□□□ -1.28
SF3B3-215ENST00000577085 H0Y9P7 68 aa7.04□□□□□ -1.28
SF3B3-215ENST00000577085 SYNE2Q8WXH0 6885 aaKnown RBP7.02□□□□□ -1.29
SF3B3-215ENST00000577085 Q5VV11 94 aa7.01□□□□□ -1.29
SF3B3-215ENST00000577085 LINC00643Q86TS7 51 aa7.01□□□□□ -1.29
SF3B3-215ENST00000577085 KLKP1Q107X0 134 aa7□□□□□ -1.29
SF3B3-215ENST00000577085 A0A087WVE0 104 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms