RNA–Protein interactions for RNA: ENST00000575909.1

TOM1L1-222, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1L1, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-222ENST00000575909 PKD1L2Q7Z442 2459 aa1.98□□□□□ -2.09
TOM1L1-222ENST00000575909 SETXQ7Z333 2677 aaKnown RBP1.98□□□□□ -2.09
TOM1L1-222ENST00000575909 COL6A5A8TX70 2615 aa1.98□□□□□ -2.09
TOM1L1-222ENST00000575909 LAMA3Q16787 3333 aa1.97□□□□□ -2.09
TOM1L1-222ENST00000575909 WDFY4Q6ZS81 3184 aa1.97□□□□□ -2.09
TOM1L1-222ENST00000575909 F8P00451 2351 aa1.97□□□□□ -2.09
TOM1L1-222ENST00000575909 CHD6Q8TD26 2715 aa1.97□□□□□ -2.09
TOM1L1-222ENST00000575909 USP34Q70CQ2 3546 aa1.97□□□□□ -2.09
TOM1L1-222ENST00000575909 TNP1P09430 55 aa1.96□□□□□ -2.1
TOM1L1-222ENST00000575909 SPART-AS1P0CW21 52 aa1.96□□□□□ -2.1
TOM1L1-222ENST00000575909 LINC01556Q5JQF7 62 aa1.96□□□□□ -2.1
TOM1L1-222ENST00000575909 MAP1BP46821 2468 aaKnown RBP1.96□□□□□ -2.1
TOM1L1-222ENST00000575909 TRIOO75962 3097 aa1.95□□□□□ -2.1
TOM1L1-222ENST00000575909 DNAH12Q6ZR08 3092 aa1.95□□□□□ -2.1
TOM1L1-222ENST00000575909 CFAP54Q96N23 3096 aa1.95□□□□□ -2.1
TOM1L1-222ENST00000575909 UNC79Q9P2D8 2635 aa1.95□□□□□ -2.1
TOM1L1-222ENST00000575909 NAV2Q8IVL1 2488 aa1.95□□□□□ -2.1
TOM1L1-222ENST00000575909 ABCA12Q86UK0 2595 aa1.95□□□□□ -2.1
TOM1L1-222ENST00000575909 CHD8Q9HCK8 2581 aa1.95□□□□□ -2.1
TOM1L1-222ENST00000575909 RP1L1Q8IWN7 2480 aaPredicted RBP1.95□□□□□ -2.1
TOM1L1-222ENST00000575909 APC2O95996 2303 aa1.95□□□□□ -2.1
TOM1L1-222ENST00000575909 EPG5Q9HCE0 2579 aa1.93□□□□□ -2.1
TOM1L1-222ENST00000575909 MYO15AQ9UKN7 3530 aa1.92□□□□□ -2.1
TOM1L1-222ENST00000575909 FASNP49327 2511 aaKnown RBP1.92□□□□□ -2.1
TOM1L1-222ENST00000575909 C5orf42Q9H799 3197 aa1.92□□□□□ -2.1
TOM1L1-222ENST00000575909 CDH23Q9H251 3354 aa1.92□□□□□ -2.1
TOM1L1-222ENST00000575909 ZNF292O60281 2723 aa1.92□□□□□ -2.1
TOM1L1-222ENST00000575909 GVINP1Q7Z2Y8 2422 aa1.91□□□□□ -2.1
TOM1L1-222ENST00000575909 RIF1Q5UIP0 2472 aaKnown RBP1.91□□□□□ -2.1
TOM1L1-222ENST00000575909 C9orf92A6NGG3 77 aa1.91□□□□□ -2.1
TOM1L1-222ENST00000575909 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
TOM1L1-222ENST00000575909 CEP250Q9BV73 2442 aa1.91□□□□□ -2.1
TOM1L1-222ENST00000575909 XIRP2A4UGR9 3374 aa1.91□□□□□ -2.1
TOM1L1-222ENST00000575909 FLNBO75369 2602 aaKnown RBP1.9□□□□□ -2.1
TOM1L1-222ENST00000575909 HTTP42858 3142 aa1.9□□□□□ -2.11
TOM1L1-222ENST00000575909 A0A096LPF7 62 aa1.9□□□□□ -2.11
TOM1L1-222ENST00000575909 EP300Q09472 2414 aaPredicted RBP1.9□□□□□ -2.11
TOM1L1-222ENST00000575909 CFAP47Q6ZTR5 3102 aa1.9□□□□□ -2.11
TOM1L1-222ENST00000575909 GCN1Q92616 2671 aaKnown RBP1.9□□□□□ -2.11
TOM1L1-222ENST00000575909 VPS13AQ96RL7 3174 aa1.9□□□□□ -2.11
TOM1L1-222ENST00000575909 DNAH14Q0VDD8 3507 aa1.9□□□□□ -2.11
TOM1L1-222ENST00000575909 FRYLO94915 3013 aa1.89□□□□□ -2.11
TOM1L1-222ENST00000575909 MYO18BQ8IUG5 2567 aa1.89□□□□□ -2.11
TOM1L1-222ENST00000575909 DEFB135Q30KP9 77 aa1.89□□□□□ -2.11
TOM1L1-222ENST00000575909 ASPMQ8IZT6 3477 aa1.89□□□□□ -2.11
TOM1L1-222ENST00000575909 MAST4O15021 2626 aa1.89□□□□□ -2.11
TOM1L1-222ENST00000575909 HELZ2Q9BYK8 2649 aaKnown RBP1.89□□□□□ -2.11
TOM1L1-222ENST00000575909 VPS13DQ5THJ4 4388 aa1.89□□□□□ -2.11
TOM1L1-222ENST00000575909 CELSR1Q9NYQ6 3014 aa1.89□□□□□ -2.11
TOM1L1-222ENST00000575909 USP9XQ93008 2570 aaPredicted RBP1.89□□□□□ -2.11
TOM1L1-222ENST00000575909 CCDC168Q8NDH2 2452 aa1.89□□□□□ -2.11
TOM1L1-222ENST00000575909 KRTAP10-4P60372 401 aaPredicted RBP1.88□□□□□ -2.11
TOM1L1-222ENST00000575909 FAM186AA6NE01 2351 aa1.88□□□□□ -2.11
TOM1L1-222ENST00000575909 NBEAQ8NFP9 2946 aa1.87□□□□□ -2.11
TOM1L1-222ENST00000575909 ACACBO00763 2458 aa1.86□□□□□ -2.11
TOM1L1-222ENST00000575909 CRYBG3Q68DQ2 2970 aa1.86□□□□□ -2.11
TOM1L1-222ENST00000575909 NBPF19A0A087WUL8 3843 aa1.86□□□□□ -2.11
TOM1L1-222ENST00000575909 LAMA5O15230 3695 aa1.86□□□□□ -2.11
TOM1L1-222ENST00000575909 FRYQ5TBA9 3013 aa1.86□□□□□ -2.11
TOM1L1-222ENST00000575909 RPS29P62273 56 aaKnown RBP1.86□□□□□ -2.11
TOM1L1-222ENST00000575909 ITPR3Q14573 2671 aa1.86□□□□□ -2.11
TOM1L1-222ENST00000575909 DMXL1Q9Y485 3027 aa1.86□□□□□ -2.11
TOM1L1-222ENST00000575909 DCHS1Q96JQ0 3298 aa1.86□□□□□ -2.11
TOM1L1-222ENST00000575909 SMG1Q96Q15 3661 aaKnown RBP1.85□□□□□ -2.11
TOM1L1-222ENST00000575909 NBASA2RRP1 2371 aa1.85□□□□□ -2.11
TOM1L1-222ENST00000575909 WDFY3Q8IZQ1 3526 aa1.85□□□□□ -2.11
TOM1L1-222ENST00000575909 NCOR2Q9Y618 2525 aa1.85□□□□□ -2.11
TOM1L1-222ENST00000575909 TEP1Q99973 2627 aaKnown RBP1.85□□□□□ -2.11
TOM1L1-222ENST00000575909 CREBBPQ92793 2442 aa1.85□□□□□ -2.11
TOM1L1-222ENST00000575909 AKAP13Q12802 2813 aa1.84□□□□□ -2.12
TOM1L1-222ENST00000575909 DMBT1Q9UGM3 2413 aaPredicted RBP1.83□□□□□ -2.12
TOM1L1-222ENST00000575909 KALRNO60229 2985 aa1.83□□□□□ -2.12
TOM1L1-222ENST00000575909 SPEGQ15772 3267 aa1.83□□□□□ -2.12
TOM1L1-222ENST00000575909 HECTD1Q9ULT8 2610 aa1.83□□□□□ -2.12
TOM1L1-222ENST00000575909 DEFB133Q30KQ1 61 aa1.83□□□□□ -2.12
TOM1L1-222ENST00000575909 ZFHX4Q86UP3 3567 aa1.83□□□□□ -2.12
TOM1L1-222ENST00000575909 DOPEY1Q5JWR5 2465 aa1.83□□□□□ -2.12
TOM1L1-222ENST00000575909 ZFYVE26Q68DK2 2539 aa1.83□□□□□ -2.12
TOM1L1-222ENST00000575909 MYO9AB2RTY4 2548 aa1.82□□□□□ -2.12
TOM1L1-222ENST00000575909 CHD9Q3L8U1 2897 aa1.82□□□□□ -2.12
TOM1L1-222ENST00000575909 SETD2Q9BYW2 2564 aaPredicted RBP1.82□□□□□ -2.12
TOM1L1-222ENST00000575909 CFAP46Q8IYW2 2715 aa1.82□□□□□ -2.12
TOM1L1-222ENST00000575909 M0R2T5 61 aa1.81□□□□□ -2.12
TOM1L1-222ENST00000575909 CENPEQ02224 2701 aa1.81□□□□□ -2.12
TOM1L1-222ENST00000575909 MAP1AP78559 2803 aaPredicted RBP1.81□□□□□ -2.12
TOM1L1-222ENST00000575909 SPTAN1Q13813 2472 aaKnown RBP1.8□□□□□ -2.12
TOM1L1-222ENST00000575909 USP24Q9UPU5 2620 aa1.8□□□□□ -2.12
TOM1L1-222ENST00000575909 ZZEF1O43149 2961 aa1.8□□□□□ -2.12
TOM1L1-222ENST00000575909 DNAH11Q96DT5 4516 aa1.79□□□□□ -2.12
TOM1L1-222ENST00000575909 CEP295Q9C0D2 2601 aa1.79□□□□□ -2.12
TOM1L1-222ENST00000575909 TEX15Q9BXT5 2789 aa1.79□□□□□ -2.12
TOM1L1-222ENST00000575909 LRBAP50851 2863 aa1.79□□□□□ -2.12
TOM1L1-222ENST00000575909 COL12A1Q99715 3063 aa1.79□□□□□ -2.12
TOM1L1-222ENST00000575909 LAMA1P25391 3075 aa1.77□□□□□ -2.13
TOM1L1-222ENST00000575909 ITPR1Q14643 2758 aa1.77□□□□□ -2.13
TOM1L1-222ENST00000575909 TENM4Q6N022 2769 aa1.77□□□□□ -2.13
TOM1L1-222ENST00000575909 AKAP9Q99996 3911 aa1.77□□□□□ -2.13
TOM1L1-222ENST00000575909 RELNP78509 3460 aa1.77□□□□□ -2.13
TOM1L1-222ENST00000575909 FREM2Q5SZK8 3169 aa1.77□□□□□ -2.13
TOM1L1-222ENST00000575909 UTP20O75691 2785 aaKnown RBP1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms