RNA–Protein interactions for RNA: ENST00000575882.5

TOM1L1-221, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TOM1L1, Length 2,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-221ENST00000575882 KTN1-AS1Q86SY8 53 aa10.21□□□□□ -0.77
TOM1L1-221ENST00000575882 SPINK6Q6UWN8 80 aa10.18□□□□□ -0.78
TOM1L1-221ENST00000575882 SPAG11AQ6PDA7 123 aa10.18□□□□□ -0.78
TOM1L1-221ENST00000575882 DNAH8Q96JB1 4490 aa10.17□□□□□ -0.78
TOM1L1-221ENST00000575882 A6NED7 52 aa10.16□□□□□ -0.78
TOM1L1-221ENST00000575882 HRES1P13985 223 aa10.16□□□□□ -0.78
TOM1L1-221ENST00000575882 RBM12B-AS1Q9P1G2 102 aa10.16□□□□□ -0.78
TOM1L1-221ENST00000575882 VPS13DQ5THJ4 4388 aa10.16□□□□□ -0.78
TOM1L1-221ENST00000575882 LCA10Q71F78 164 aa10.14□□□□□ -0.79
TOM1L1-221ENST00000575882 LINC01558Q9Y6Z2 57 aa10.14□□□□□ -0.79
TOM1L1-221ENST00000575882 STARD9Q9P2P6 4700 aa10.13□□□□□ -0.79
TOM1L1-221ENST00000575882 Q5W150 140 aa10.12□□□□□ -0.79
TOM1L1-221ENST00000575882 CIRBP-AS1Q8TBR5 109 aa10.12□□□□□ -0.79
TOM1L1-221ENST00000575882 IGLV7-43P04211 117 aa10.11□□□□□ -0.79
TOM1L1-221ENST00000575882 FRAS1Q86XX4 4008 aa10.11□□□□□ -0.79
TOM1L1-221ENST00000575882 HECTD4Q9Y4D8 3996 aa10.11□□□□□ -0.79
TOM1L1-221ENST00000575882 SPTSSBQ8NFR3 76 aa10.1□□□□□ -0.79
TOM1L1-221ENST00000575882 KRTAP13-3Q3SY46 172 aa10.09□□□□□ -0.79
TOM1L1-221ENST00000575882 ATP11AUNQ6ZP68 121 aa10.09□□□□□ -0.79
TOM1L1-221ENST00000575882 DNAH17Q9UFH2 4485 aa10.06□□□□□ -0.8
TOM1L1-221ENST00000575882 CDC42SE1Q9NRR8 79 aa10.05□□□□□ -0.8
TOM1L1-221ENST00000575882 DNAH2Q9P225 4427 aa10.05□□□□□ -0.8
TOM1L1-221ENST00000575882 FBN3Q75N90 2809 aa10.04□□□□□ -0.8
TOM1L1-221ENST00000575882 A6NN06 94 aa10.03□□□□□ -0.8
TOM1L1-221ENST00000575882 C1orf134Q5TEV5 83 aa10.03□□□□□ -0.8
TOM1L1-221ENST00000575882 PRKDCP78527 4128 aaKnown RBP10.02□□□□□ -0.81
TOM1L1-221ENST00000575882 C8orf87E5RJ46 101 aa10.01□□□□□ -0.81
TOM1L1-221ENST00000575882 SSBP3-AS1Q7Z2R9 100 aa10.01□□□□□ -0.81
TOM1L1-221ENST00000575882 PRR26Q8N8Z3 221 aa10.01□□□□□ -0.81
TOM1L1-221ENST00000575882 KMT2AQ03164 3969 aa10□□□□□ -0.81
TOM1L1-221ENST00000575882 SPINK7P58062 85 aa9.99□□□□□ -0.81
TOM1L1-221ENST00000575882 MEGF8Q7Z7M0 2845 aa9.98□□□□□ -0.81
TOM1L1-221ENST00000575882 ACYP2P14621 99 aa9.97□□□□□ -0.81
TOM1L1-221ENST00000575882 LINC00313P59037 77 aa9.95□□□□□ -0.82
TOM1L1-221ENST00000575882 TGP01266 2768 aa9.94□□□□□ -0.82
TOM1L1-221ENST00000575882 C7orf65Q6ZTY9 151 aa9.93□□□□□ -0.82
TOM1L1-221ENST00000575882 RETNLBQ9BQ08 111 aa9.93□□□□□ -0.82
TOM1L1-221ENST00000575882 FAM229AH3BQW9 127 aa9.92□□□□□ -0.82
TOM1L1-221ENST00000575882 LY6G6CO95867 125 aa9.91□□□□□ -0.82
TOM1L1-221ENST00000575882 DMAC1Q96GE9 116 aa9.91□□□□□ -0.82
TOM1L1-221ENST00000575882 ALMS1Q8TCU4 4167 aa9.9□□□□□ -0.82
TOM1L1-221ENST00000575882 KRTAP10-2P60368 255 aa9.89□□□□□ -0.83
TOM1L1-221ENST00000575882 KRTAP13-2Q52LG2 175 aa9.89□□□□□ -0.83
TOM1L1-221ENST00000575882 C4orf48Q5BLP8 95 aa9.87□□□□□ -0.83
TOM1L1-221ENST00000575882 IGKV2-30P06310 120 aa9.86□□□□□ -0.83
TOM1L1-221ENST00000575882 DNAH6Q9C0G6 4158 aa9.83□□□□□ -0.84
TOM1L1-221ENST00000575882 DNAH11Q96DT5 4516 aa9.82□□□□□ -0.84
TOM1L1-221ENST00000575882 KRTAP16-1A8MUX0 517 aa9.82□□□□□ -0.84
TOM1L1-221ENST00000575882 DNAH5Q8TE73 4624 aa9.77□□□□□ -0.84
TOM1L1-221ENST00000575882 KRTAP10-1P60331 282 aa9.77□□□□□ -0.85
TOM1L1-221ENST00000575882 A0A1B0GU69 56 aa9.76□□□□□ -0.85
TOM1L1-221ENST00000575882 Q6ZSA8 131 aa9.76□□□□□ -0.85
TOM1L1-221ENST00000575882 IGKV2D-30A0A075B6S6 120 aa9.75□□□□□ -0.85
TOM1L1-221ENST00000575882 KRTAP1-4P0C5Y4 121 aa9.75□□□□□ -0.85
TOM1L1-221ENST00000575882 LRP1BQ9NZR2 4599 aa9.71□□□□□ -0.86
TOM1L1-221ENST00000575882 PLA2G1BP04054 148 aaKnown RBP9.64□□□□□ -0.87
TOM1L1-221ENST00000575882 TYMSOSQ8TAI1 123 aa9.64□□□□□ -0.87
TOM1L1-221ENST00000575882 SPATA8Q6RVD6 105 aa9.63□□□□□ -0.87
TOM1L1-221ENST00000575882 PKD1P98161 4303 aa9.62□□□□□ -0.87
TOM1L1-221ENST00000575882 SPINK1P00995 79 aa9.6□□□□□ -0.87
TOM1L1-221ENST00000575882 PRAC1Q96KF2 57 aa9.6□□□□□ -0.87
TOM1L1-221ENST00000575882 UQCR11O14957 56 aa9.59□□□□□ -0.87
TOM1L1-221ENST00000575882 MIR22HGQ0VDD5 57 aa9.59□□□□□ -0.87
TOM1L1-221ENST00000575882 LINC01554Q52M75 96 aa9.55□□□□□ -0.88
TOM1L1-221ENST00000575882 FAT2Q9NYQ8 4349 aa9.55□□□□□ -0.88
TOM1L1-221ENST00000575882 VPS13BQ7Z7G8 4022 aa9.53□□□□□ -0.88
TOM1L1-221ENST00000575882 H3BS24 57 aa9.53□□□□□ -0.88
TOM1L1-221ENST00000575882 ADM2Q7Z4H4 148 aa9.52□□□□□ -0.88
TOM1L1-221ENST00000575882 Q8N1X5 172 aa9.52□□□□□ -0.88
TOM1L1-221ENST00000575882 DNHD1Q96M86 4753 aa9.52□□□□□ -0.89
TOM1L1-221ENST00000575882 LINC00304Q8N9R0 145 aa9.49□□□□□ -0.89
TOM1L1-221ENST00000575882 HYDINQ4G0P3 5121 aa9.48□□□□□ -0.89
TOM1L1-221ENST00000575882 RPS29P62273 56 aaKnown RBP9.44□□□□□ -0.9
TOM1L1-221ENST00000575882 C9orf92A6NGG3 77 aa9.37□□□□□ -0.91
TOM1L1-221ENST00000575882 SMR3BP02814 79 aaPredicted RBP9.34□□□□□ -0.91
TOM1L1-221ENST00000575882 A8MUU9 505 aa9.33□□□□□ -0.92
TOM1L1-221ENST00000575882 C20orf166-AS1Q96NR2 134 aa9.33□□□□□ -0.92
TOM1L1-221ENST00000575882 PKHD1P08F94 4074 aa9.29□□□□□ -0.92
TOM1L1-221ENST00000575882 SACSQ9NZJ4 4579 aa9.28□□□□□ -0.92
TOM1L1-221ENST00000575882 KRTAP3-1Q9BYR8 98 aa9.28□□□□□ -0.92
TOM1L1-221ENST00000575882 CSAG1Q6PB30 78 aa9.26□□□□□ -0.93
TOM1L1-221ENST00000575882 H0YAA0 97 aa9.25□□□□□ -0.93
TOM1L1-221ENST00000575882 A0A1B0GU33 70 aa9.19□□□□□ -0.94
TOM1L1-221ENST00000575882 KRTAP10-4P60372 401 aaPredicted RBP9.19□□□□□ -0.94
TOM1L1-221ENST00000575882 DYNC1H1Q14204 4646 aaKnown RBP9.16□□□□□ -0.94
TOM1L1-221ENST00000575882 H1FX-AS1Q4G0G2 97 aa9.15□□□□□ -0.94
TOM1L1-221ENST00000575882 PKHD1L1Q86WI1 4243 aa9.14□□□□□ -0.95
TOM1L1-221ENST00000575882 FAT1Q14517 4588 aa9.13□□□□□ -0.95
TOM1L1-221ENST00000575882 A0A1B0GVY2 172 aa9.11□□□□□ -0.95
TOM1L1-221ENST00000575882 APOBP04114 4563 aaKnown RBP9.1□□□□□ -0.95
TOM1L1-221ENST00000575882 COX6B2Q6YFQ2 88 aa9.09□□□□□ -0.95
TOM1L1-221ENST00000575882 FLG2Q5D862 2391 aaPredicted RBP8.99□□□□□ -0.97
TOM1L1-221ENST00000575882 KRTAP25-1Q3LHN0 102 aa8.95□□□□□ -0.98
TOM1L1-221ENST00000575882 ROMO1P60602 79 aa8.94□□□□□ -0.98
TOM1L1-221ENST00000575882 K7ERS5 55 aa8.92□□□□□ -0.98
TOM1L1-221ENST00000575882 KRTAP21-3Q3LHN1 58 aa8.88□□□□□ -0.99
TOM1L1-221ENST00000575882 KRTAP3-3Q9BYR6 98 aa8.87□□□□□ -0.99
TOM1L1-221ENST00000575882 FAT3Q8TDW7 4589 aa8.86□□□□□ -0.99
TOM1L1-221ENST00000575882 KRTAP10-6P60371 365 aaPredicted RBP8.85□□□□□ -0.99
TOM1L1-221ENST00000575882 RPL37P61927 97 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms