RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 C1orf195Q5TG92 126 aa5.29□□□□□ -1.56
NCBP3-204ENST00000574911 MRPL34Q9BQ48 92 aaKnown RBP5.29□□□□□ -1.56
NCBP3-204ENST00000574911 DNAH5Q8TE73 4624 aa5.28□□□□□ -1.56
NCBP3-204ENST00000574911 A0A087X002 238 aa5.27□□□□□ -1.57
NCBP3-204ENST00000574911 NOTCH2NLQ7Z3S9 236 aa5.27□□□□□ -1.57
NCBP3-204ENST00000574911 DNAH11Q96DT5 4516 aa5.27□□□□□ -1.57
NCBP3-204ENST00000574911 NDUFS5O43920 106 aa5.26□□□□□ -1.57
NCBP3-204ENST00000574911 PSPHP1O15172 72 aa5.25□□□□□ -1.57
NCBP3-204ENST00000574911 LY6G6CO95867 125 aa5.25□□□□□ -1.57
NCBP3-204ENST00000574911 PCOTHQ58A44 107 aa5.25□□□□□ -1.57
NCBP3-204ENST00000574911 MEGF8Q7Z7M0 2845 aa5.25□□□□□ -1.57
NCBP3-204ENST00000574911 SSBP3-AS1Q7Z2R9 100 aa5.25□□□□□ -1.57
NCBP3-204ENST00000574911 COA5Q86WW8 74 aa5.24□□□□□ -1.57
NCBP3-204ENST00000574911 Q8N9P0 234 aaPredicted RBP5.24□□□□□ -1.57
NCBP3-204ENST00000574911 CIRBP-AS1Q8TBR5 109 aa5.24□□□□□ -1.57
NCBP3-204ENST00000574911 KRTAP10-2P60368 255 aa5.23□□□□□ -1.57
NCBP3-204ENST00000574911 A8MUN3 132 aa5.23□□□□□ -1.57
NCBP3-204ENST00000574911 SPINK6Q6UWN8 80 aa5.23□□□□□ -1.57
NCBP3-204ENST00000574911 KRTAP13-3Q3SY46 172 aa5.21□□□□□ -1.58
NCBP3-204ENST00000574911 Q5VV11 94 aa5.21□□□□□ -1.58
NCBP3-204ENST00000574911 LIMD2Q9BT23 127 aa5.21□□□□□ -1.58
NCBP3-204ENST00000574911 DNHD1Q96M86 4753 aa5.21□□□□□ -1.58
NCBP3-204ENST00000574911 C8orf87E5RJ46 101 aa5.2□□□□□ -1.58
NCBP3-204ENST00000574911 Q5W150 140 aa5.2□□□□□ -1.58
NCBP3-204ENST00000574911 PRR26Q8N8Z3 221 aa5.2□□□□□ -1.58
NCBP3-204ENST00000574911 PKD1P98161 4303 aa5.2□□□□□ -1.58
NCBP3-204ENST00000574911 LOC101927531A0A1B0GV80 90 aa5.19□□□□□ -1.58
NCBP3-204ENST00000574911 Q6ZSA8 131 aa5.19□□□□□ -1.58
NCBP3-204ENST00000574911 A0A0A0MQY5 61 aa5.18□□□□□ -1.58
NCBP3-204ENST00000574911 KRTAP13-2Q52LG2 175 aa5.18□□□□□ -1.58
NCBP3-204ENST00000574911 KRTAP10-1P60331 282 aa5.17□□□□□ -1.58
NCBP3-204ENST00000574911 PRR15LQ9BU68 103 aa5.17□□□□□ -1.58
NCBP3-204ENST00000574911 LRP1BQ9NZR2 4599 aa5.17□□□□□ -1.58
NCBP3-204ENST00000574911 HRES1P13985 223 aa5.17□□□□□ -1.58
NCBP3-204ENST00000574911 FAT2Q9NYQ8 4349 aa5.16□□□□□ -1.58
NCBP3-204ENST00000574911 TGP01266 2768 aa5.15□□□□□ -1.58
NCBP3-204ENST00000574911 LINC00313P59037 77 aa5.15□□□□□ -1.59
NCBP3-204ENST00000574911 Q75L30 129 aa5.15□□□□□ -1.59
NCBP3-204ENST00000574911 CHKB-CPT1BH3BT56 60 aa5.14□□□□□ -1.59
NCBP3-204ENST00000574911 PMAIP1Q13794 54 aa5.14□□□□□ -1.59
NCBP3-204ENST00000574911 J3QL48 77 aa5.14□□□□□ -1.59
NCBP3-204ENST00000574911 LINC01558Q9Y6Z2 57 aa5.14□□□□□ -1.59
NCBP3-204ENST00000574911 KRTAP1-4P0C5Y4 121 aa5.13□□□□□ -1.59
NCBP3-204ENST00000574911 HYDINQ4G0P3 5121 aa5.12□□□□□ -1.59
NCBP3-204ENST00000574911 SPAG11AQ6PDA7 123 aa5.11□□□□□ -1.59
NCBP3-204ENST00000574911 A8MU10 97 aa5.11□□□□□ -1.59
NCBP3-204ENST00000574911 KRTAP16-1A8MUX0 517 aa5.11□□□□□ -1.59
NCBP3-204ENST00000574911 FAM229AH3BQW9 127 aa5.11□□□□□ -1.59
NCBP3-204ENST00000574911 KRTAP3-3Q9BYR6 98 aa5.1□□□□□ -1.59
NCBP3-204ENST00000574911 KRTAP3-2Q9BYR7 98 aa5.1□□□□□ -1.59
NCBP3-204ENST00000574911 IGKV2-30P06310 120 aa5.08□□□□□ -1.6
NCBP3-204ENST00000574911 ACYP2P14621 99 aa5.08□□□□□ -1.6
NCBP3-204ENST00000574911 VPS13BQ7Z7G8 4022 aa5.07□□□□□ -1.6
NCBP3-204ENST00000574911 LCA10Q71F78 164 aa5.07□□□□□ -1.6
NCBP3-204ENST00000574911 DMAC1Q96GE9 116 aa5.07□□□□□ -1.6
NCBP3-204ENST00000574911 RETNLBQ9BQ08 111 aa5.07□□□□□ -1.6
NCBP3-204ENST00000574911 A6NED7 52 aa5.07□□□□□ -1.6
NCBP3-204ENST00000574911 SACSQ9NZJ4 4579 aa5.06□□□□□ -1.6
NCBP3-204ENST00000574911 PLA2G1BP04054 148 aaKnown RBP5.05□□□□□ -1.6
NCBP3-204ENST00000574911 TYMSOSQ8TAI1 123 aa5.04□□□□□ -1.6
NCBP3-204ENST00000574911 SPINK1P00995 79 aa5.03□□□□□ -1.6
NCBP3-204ENST00000574911 CDC42SE1Q9NRR8 79 aa5.03□□□□□ -1.6
NCBP3-204ENST00000574911 ATP11AUNQ6ZP68 121 aa5.02□□□□□ -1.61
NCBP3-204ENST00000574911 SPINK7P58062 85 aa5.02□□□□□ -1.61
NCBP3-204ENST00000574911 SPTSSBQ8NFR3 76 aa4.99□□□□□ -1.61
NCBP3-204ENST00000574911 RPS29P62273 56 aaKnown RBP4.99□□□□□ -1.61
NCBP3-204ENST00000574911 IGKV2D-30A0A075B6S6 120 aa4.98□□□□□ -1.61
NCBP3-204ENST00000574911 KRTAP21-3Q3LHN1 58 aa4.97□□□□□ -1.61
NCBP3-204ENST00000574911 LINC00304Q8N9R0 145 aa4.97□□□□□ -1.61
NCBP3-204ENST00000574911 DYNC1H1Q14204 4646 aaKnown RBP4.97□□□□□ -1.61
NCBP3-204ENST00000574911 A6NN06 94 aa4.96□□□□□ -1.62
NCBP3-204ENST00000574911 APOBP04114 4563 aaKnown RBP4.94□□□□□ -1.62
NCBP3-204ENST00000574911 C7orf65Q6ZTY9 151 aa4.94□□□□□ -1.62
NCBP3-204ENST00000574911 PKHD1P08F94 4074 aa4.94□□□□□ -1.62
NCBP3-204ENST00000574911 PKHD1L1Q86WI1 4243 aa4.93□□□□□ -1.62
NCBP3-204ENST00000574911 RBM12B-AS1Q9P1G2 102 aa4.93□□□□□ -1.62
NCBP3-204ENST00000574911 A0A1B0GU69 56 aa4.93□□□□□ -1.62
NCBP3-204ENST00000574911 SMR3BP02814 79 aaPredicted RBP4.92□□□□□ -1.62
NCBP3-204ENST00000574911 KTN1-AS1Q86SY8 53 aa4.92□□□□□ -1.62
NCBP3-204ENST00000574911 A0A1B0GVY2 172 aa4.91□□□□□ -1.62
NCBP3-204ENST00000574911 KRTAP10-4P60372 401 aaPredicted RBP4.91□□□□□ -1.62
NCBP3-204ENST00000574911 A8MUU9 505 aa4.88□□□□□ -1.63
NCBP3-204ENST00000574911 C20orf166-AS1Q96NR2 134 aa4.88□□□□□ -1.63
NCBP3-204ENST00000574911 SPATA8Q6RVD6 105 aa4.88□□□□□ -1.63
NCBP3-204ENST00000574911 Q8N1X5 172 aa4.87□□□□□ -1.63
NCBP3-204ENST00000574911 FAT1Q14517 4588 aa4.87□□□□□ -1.63
NCBP3-204ENST00000574911 C9orf92A6NGG3 77 aa4.86□□□□□ -1.63
NCBP3-204ENST00000574911 UQCR11O14957 56 aa4.84□□□□□ -1.63
NCBP3-204ENST00000574911 MIR22HGQ0VDD5 57 aa4.83□□□□□ -1.64
NCBP3-204ENST00000574911 RYR2Q92736 4967 aa4.81□□□□□ -1.64
NCBP3-204ENST00000574911 KRTAP3-1Q9BYR8 98 aa4.8□□□□□ -1.64
NCBP3-204ENST00000574911 SEC61BP60468 96 aaKnown RBP4.79□□□□□ -1.64
NCBP3-204ENST00000574911 FAT3Q8TDW7 4589 aa4.78□□□□□ -1.64
NCBP3-204ENST00000574911 TNXBP22105 4242 aa4.74□□□□□ -1.65
NCBP3-204ENST00000574911 KRTAP10-8P60410 259 aa4.73□□□□□ -1.65
NCBP3-204ENST00000574911 COX6B2Q6YFQ2 88 aa4.71□□□□□ -1.66
NCBP3-204ENST00000574911 KMT2CQ8NEZ4 4911 aaKnown RBP4.7□□□□□ -1.66
NCBP3-204ENST00000574911 ADM2Q7Z4H4 148 aa4.7□□□□□ -1.66
NCBP3-204ENST00000574911 PRAC1Q96KF2 57 aa4.7□□□□□ -1.66
NCBP3-204ENST00000574911 H0YAA0 97 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms