RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 MPLKIPQ8TAP9 179 aa5.66□□□□□ -1.5
RPAIN-214ENST00000574003 C8orf87E5RJ46 101 aa5.65□□□□□ -1.5
RPAIN-214ENST00000574003 Q6ZQT0 140 aa5.65□□□□□ -1.5
RPAIN-214ENST00000574003 ATXN8Q156A1 80 aa5.64□□□□□ -1.51
RPAIN-214ENST00000574003 M0R143 59 aa5.63□□□□□ -1.51
RPAIN-214ENST00000574003 MT2AP02795 61 aa5.62□□□□□ -1.51
RPAIN-214ENST00000574003 ZCCHC13Q8WW36 166 aaKnown RBP5.62□□□□□ -1.51
RPAIN-214ENST00000574003 C14orf132Q9NPU4 83 aa5.62□□□□□ -1.51
RPAIN-214ENST00000574003 RBM12B-AS1Q9P1G2 102 aa5.62□□□□□ -1.51
RPAIN-214ENST00000574003 IGKV3D-7A0A0C4DH55 119 aa5.6□□□□□ -1.51
RPAIN-214ENST00000574003 J3KT08 172 aa5.6□□□□□ -1.51
RPAIN-214ENST00000574003 BATFQ16520 125 aa5.6□□□□□ -1.51
RPAIN-214ENST00000574003 USH2AO75445 5202 aa5.59□□□□□ -1.51
RPAIN-214ENST00000574003 LOC110117498A0A087WWA1 95 aa5.59□□□□□ -1.51
RPAIN-214ENST00000574003 MT1FP04733 61 aa5.59□□□□□ -1.51
RPAIN-214ENST00000574003 SPINK7P58062 85 aa5.59□□□□□ -1.51
RPAIN-214ENST00000574003 C8orf17Q9NRJ1 99 aa5.59□□□□□ -1.51
RPAIN-214ENST00000574003 A8MWP4 228 aa5.58□□□□□ -1.52
RPAIN-214ENST00000574003 JMJD7-PLA2G4BH0Y9G9 81 aa5.58□□□□□ -1.52
RPAIN-214ENST00000574003 SMIM6P0DI80 62 aa5.58□□□□□ -1.52
RPAIN-214ENST00000574003 Q8N9P0 234 aaPredicted RBP5.58□□□□□ -1.52
RPAIN-214ENST00000574003 SSPOA2VEC9 5147 aa5.57□□□□□ -1.52
RPAIN-214ENST00000574003 NDUFB1O75438 58 aa5.57□□□□□ -1.52
RPAIN-214ENST00000574003 MTURNQ8N3F0 131 aa5.57□□□□□ -1.52
RPAIN-214ENST00000574003 C21orf62-AS1Q17RA5 79 aa5.55□□□□□ -1.52
RPAIN-214ENST00000574003 LCE2BO14633 110 aa5.54□□□□□ -1.52
RPAIN-214ENST00000574003 LYRM7Q5U5X0 104 aa5.54□□□□□ -1.52
RPAIN-214ENST00000574003 KRTAP10-10P60014 251 aa5.53□□□□□ -1.52
RPAIN-214ENST00000574003 NREPQ16612 68 aa5.53□□□□□ -1.52
RPAIN-214ENST00000574003 Q6ZVQ6 151 aa5.53□□□□□ -1.52
RPAIN-214ENST00000574003 PRR15Q8IV56 129 aa5.53□□□□□ -1.52
RPAIN-214ENST00000574003 TSTD3H0UI37 97 aa5.52□□□□□ -1.53
RPAIN-214ENST00000574003 PDE6GP18545 87 aa5.52□□□□□ -1.53
RPAIN-214ENST00000574003 WFDC13Q8IUB5 93 aa5.52□□□□□ -1.53
RPAIN-214ENST00000574003 KRTAP9-3Q9BYQ3 159 aa5.52□□□□□ -1.53
RPAIN-214ENST00000574003 MMP24-AS1A0A0U1RRL7 71 aa5.51□□□□□ -1.53
RPAIN-214ENST00000574003 A0A1B0GW54 56 aa5.51□□□□□ -1.53
RPAIN-214ENST00000574003 TAX1BP3O14907 124 aa5.51□□□□□ -1.53
RPAIN-214ENST00000574003 LOC105371267A0A1B0GV96 52 aa5.5□□□□□ -1.53
RPAIN-214ENST00000574003 C9orf118A6NHY6 69 aa5.5□□□□□ -1.53
RPAIN-214ENST00000574003 K7EQZ3 153 aa5.49□□□□□ -1.53
RPAIN-214ENST00000574003 A0A1W2PPM0 123 aa5.48□□□□□ -1.53
RPAIN-214ENST00000574003 MRPL34Q9BQ48 92 aaKnown RBP5.48□□□□□ -1.53
RPAIN-214ENST00000574003 TMEM254Q8TBM7 123 aa5.47□□□□□ -1.53
RPAIN-214ENST00000574003 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.46□□□□□ -1.54
RPAIN-214ENST00000574003 H3BT86 120 aa5.46□□□□□ -1.54
RPAIN-214ENST00000574003 hDV103S1A0JD37 113 aa5.45□□□□□ -1.54
RPAIN-214ENST00000574003 NDUFS5O43920 106 aa5.45□□□□□ -1.54
RPAIN-214ENST00000574003 KRTAP19-1Q8IUB9 90 aa5.45□□□□□ -1.54
RPAIN-214ENST00000574003 Q8N9L7 120 aa5.45□□□□□ -1.54
RPAIN-214ENST00000574003 FCGBPQ9Y6R7 5405 aaPredicted RBP5.44□□□□□ -1.54
RPAIN-214ENST00000574003 Q5W150 140 aa5.43□□□□□ -1.54
RPAIN-214ENST00000574003 BPY2O14599 106 aa5.42□□□□□ -1.54
RPAIN-214ENST00000574003 SMCPP49901 116 aaPredicted RBP5.42□□□□□ -1.54
RPAIN-214ENST00000574003 IGKV2D-30A0A075B6S6 120 aa5.41□□□□□ -1.54
RPAIN-214ENST00000574003 IGKV2-30P06310 120 aa5.41□□□□□ -1.54
RPAIN-214ENST00000574003 SPCS1Q9Y6A9 102 aa5.41□□□□□ -1.54
RPAIN-214ENST00000574003 KRTAP9-7A8MTY7 169 aa5.4□□□□□ -1.54
RPAIN-214ENST00000574003 H1FX-AS1Q4G0G2 97 aa5.37□□□□□ -1.55
RPAIN-214ENST00000574003 HCG22E2RYF7 251 aa5.36□□□□□ -1.55
RPAIN-214ENST00000574003 CASC2Q6XLA1 102 aa5.36□□□□□ -1.55
RPAIN-214ENST00000574003 PRO0461Q9UI25 63 aa5.35□□□□□ -1.55
RPAIN-214ENST00000574003 C7orf65Q6ZTY9 151 aa5.34□□□□□ -1.55
RPAIN-214ENST00000574003 LINC00846Q9NV44 126 aa5.34□□□□□ -1.55
RPAIN-214ENST00000574003 C4orf26Q17RF5 130 aa5.32□□□□□ -1.56
RPAIN-214ENST00000574003 SYNE2Q8WXH0 6885 aaKnown RBP5.3□□□□□ -1.56
RPAIN-214ENST00000574003 K7EP34 96 aa5.3□□□□□ -1.56
RPAIN-214ENST00000574003 COL5A1-AS1Q5SY13 56 aa5.3□□□□□ -1.56
RPAIN-214ENST00000574003 MACF1Q9UPN3 7388 aaKnown RBP5.29□□□□□ -1.56
RPAIN-214ENST00000574003 KRTAP19-6Q3LI70 58 aa5.29□□□□□ -1.56
RPAIN-214ENST00000574003 CXCL6P80162 114 aa5.27□□□□□ -1.57
RPAIN-214ENST00000574003 KRTAP3-1Q9BYR8 98 aa5.27□□□□□ -1.57
RPAIN-214ENST00000574003 UBL5Q9BZL1 73 aa5.27□□□□□ -1.57
RPAIN-214ENST00000574003 C5orf47Q569G3 176 aa5.24□□□□□ -1.57
RPAIN-214ENST00000574003 PCP4L1A6NKN8 68 aa5.21□□□□□ -1.58
RPAIN-214ENST00000574003 ETDBQ3ZM63 59 aa5.21□□□□□ -1.58
RPAIN-214ENST00000574003 C1orf64Q8NEQ6 169 aa5.2□□□□□ -1.58
RPAIN-214ENST00000574003 GTF2H5Q6ZYL4 71 aa5.18□□□□□ -1.58
RPAIN-214ENST00000574003 S4R3F8 94 aa5.18□□□□□ -1.58
RPAIN-214ENST00000574003 LCA10Q71F78 164 aa5.17□□□□□ -1.58
RPAIN-214ENST00000574003 FAM236AA0A1B0GUQ0 79 aa5.16□□□□□ -1.58
RPAIN-214ENST00000574003 FAM236BA0A1B0GV22 79 aa5.16□□□□□ -1.58
RPAIN-214ENST00000574003 F8W1H4 67 aa5.15□□□□□ -1.59
RPAIN-214ENST00000574003 CSAG1Q6PB30 78 aa5.13□□□□□ -1.59
RPAIN-214ENST00000574003 TP53AIP1Q9HCN2 124 aa5.13□□□□□ -1.59
RPAIN-214ENST00000574003 A0A087WVE0 104 aa5.12□□□□□ -1.59
RPAIN-214ENST00000574003 MT1BP07438 61 aa5.12□□□□□ -1.59
RPAIN-214ENST00000574003 KRTAP3-3Q9BYR6 98 aa5.11□□□□□ -1.59
RPAIN-214ENST00000574003 CYP4F30PQ9H0H9 118 aa5.1□□□□□ -1.59
RPAIN-214ENST00000574003 KRTAP19-8Q3LI54 63 aa5.06□□□□□ -1.6
RPAIN-214ENST00000574003 KRTAP6-3Q3LI67 103 aa5.06□□□□□ -1.6
RPAIN-214ENST00000574003 SPRR2GQ9BYE4 73 aa5.06□□□□□ -1.6
RPAIN-214ENST00000574003 Q5VV11 94 aa5.05□□□□□ -1.6
RPAIN-214ENST00000574003 TRAV22A0A0B4J277 110 aa5.04□□□□□ -1.6
RPAIN-214ENST00000574003 KLKP1Q107X0 134 aa5.04□□□□□ -1.6
RPAIN-214ENST00000574003 A6NN06 94 aa5.03□□□□□ -1.6
RPAIN-214ENST00000574003 HIST1H4AP62805 103 aaKnown RBP5.03□□□□□ -1.6
RPAIN-214ENST00000574003 LOC101927531A0A1B0GV80 90 aa5.02□□□□□ -1.61
RPAIN-214ENST00000574003 H0Y9P7 68 aa5□□□□□ -1.61
RPAIN-214ENST00000574003 ACYP1P07311 99 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms