RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 TMEM256-PLSCR3K7ERE1 68 aa10.66□□□□□ -0.7
SNF8-216ENST00000573795 ZCCHC13Q8WW36 166 aaKnown RBP10.65□□□□□ -0.7
SNF8-216ENST00000573795 K7ERJ3 54 aa10.64□□□□□ -0.71
SNF8-216ENST00000573795 KRTAP19-6Q3LI70 58 aa10.64□□□□□ -0.71
SNF8-216ENST00000573795 S100A1P23297 94 aa10.62□□□□□ -0.71
SNF8-216ENST00000573795 SPINK7P58062 85 aa10.62□□□□□ -0.71
SNF8-216ENST00000573795 MTURNQ8N3F0 131 aa10.62□□□□□ -0.71
SNF8-216ENST00000573795 PSMB2P49721 201 aa10.61□□□□□ -0.71
SNF8-216ENST00000573795 UBE2V1Q13404 147 aa10.61□□□□□ -0.71
SNF8-216ENST00000573795 VPS25Q9BRG1 176 aa10.58□□□□□ -0.72
SNF8-216ENST00000573795 HSD52Q0P140 79 aa10.55□□□□□ -0.72
SNF8-216ENST00000573795 COX6CP09669 75 aa10.54□□□□□ -0.72
SNF8-216ENST00000573795 Q8N9P0 234 aaPredicted RBP10.54□□□□□ -0.72
SNF8-216ENST00000573795 LINC00846Q9NV44 126 aa10.52□□□□□ -0.73
SNF8-216ENST00000573795 A8MWP4 228 aa10.51□□□□□ -0.73
SNF8-216ENST00000573795 RBM3P98179 157 aaKnown RBP10.51□□□□□ -0.73
SNF8-216ENST00000573795 J3KT08 172 aa10.5□□□□□ -0.73
SNF8-216ENST00000573795 WFDC13Q8IUB5 93 aa10.5□□□□□ -0.73
SNF8-216ENST00000573795 DSCR8Q96T75 97 aa10.48□□□□□ -0.73
SNF8-216ENST00000573795 Q6ZQT0 140 aa10.46□□□□□ -0.73
SNF8-216ENST00000573795 C8orf17Q9NRJ1 99 aa10.43□□□□□ -0.74
SNF8-216ENST00000573795 PYY3Q5JQD4 70 aa10.42□□□□□ -0.74
SNF8-216ENST00000573795 C9JAW5 83 aa10.41□□□□□ -0.74
SNF8-216ENST00000573795 C21orf62-AS1Q17RA5 79 aa10.41□□□□□ -0.74
SNF8-216ENST00000573795 NDUFB1O75438 58 aa10.4□□□□□ -0.74
SNF8-216ENST00000573795 IGKV3D-7A0A0C4DH55 119 aa10.38□□□□□ -0.75
SNF8-216ENST00000573795 BAALC-AS2P0C853 105 aa10.38□□□□□ -0.75
SNF8-216ENST00000573795 SCGB1C2P0DMR2 95 aa10.37□□□□□ -0.75
SNF8-216ENST00000573795 KRTAP6-3Q3LI67 103 aa10.36□□□□□ -0.75
SNF8-216ENST00000573795 LYRM7Q5U5X0 104 aa10.35□□□□□ -0.75
SNF8-216ENST00000573795 Q6ZVQ6 151 aa10.33□□□□□ -0.76
SNF8-216ENST00000573795 UQCR10Q9UDW1 63 aa10.31□□□□□ -0.76
SNF8-216ENST00000573795 H1FX-AS1Q4G0G2 97 aa10.28□□□□□ -0.76
SNF8-216ENST00000573795 LOC110117498A0A087WWA1 95 aa10.27□□□□□ -0.77
SNF8-216ENST00000573795 A0A1B0GW54 56 aa10.26□□□□□ -0.77
SNF8-216ENST00000573795 PRR15Q8IV56 129 aa10.26□□□□□ -0.77
SNF8-216ENST00000573795 MMP24-AS1A0A0U1RRL7 71 aa10.25□□□□□ -0.77
SNF8-216ENST00000573795 JMJD7-PLA2G4BH0Y9G9 81 aa10.23□□□□□ -0.77
SNF8-216ENST00000573795 TMEM254Q8TBM7 123 aa10.22□□□□□ -0.77
SNF8-216ENST00000573795 MRPL34Q9BQ48 92 aaKnown RBP10.22□□□□□ -0.77
SNF8-216ENST00000573795 NEBP20929 6669 aa10.19□□□□□ -0.78
SNF8-216ENST00000573795 C14orf132Q9NPU4 83 aa10.19□□□□□ -0.78
SNF8-216ENST00000573795 PDE6GP18545 87 aa10.17□□□□□ -0.78
SNF8-216ENST00000573795 ATXN8Q156A1 80 aa10.17□□□□□ -0.78
SNF8-216ENST00000573795 NAA38Q9BRA0 125 aaKnown RBP10.17□□□□□ -0.78
SNF8-216ENST00000573795 NREPQ16612 68 aa10.14□□□□□ -0.79
SNF8-216ENST00000573795 MUC12Q9UKN1 5478 aa10.14□□□□□ -0.79
SNF8-216ENST00000573795 hDV103S1A0JD37 113 aa10.12□□□□□ -0.79
SNF8-216ENST00000573795 K7EQZ3 153 aa10.12□□□□□ -0.79
SNF8-216ENST00000573795 IGKV2D-30A0A075B6S6 120 aa10.1□□□□□ -0.79
SNF8-216ENST00000573795 IGKV2-30P06310 120 aa10.1□□□□□ -0.79
SNF8-216ENST00000573795 Q5W150 140 aa10.1□□□□□ -0.79
SNF8-216ENST00000573795 NDUFS5O43920 106 aa10.09□□□□□ -0.79
SNF8-216ENST00000573795 C7orf65Q6ZTY9 151 aa10.06□□□□□ -0.8
SNF8-216ENST00000573795 MT1BP07438 61 aa10.01□□□□□ -0.81
SNF8-216ENST00000573795 M0R143 59 aa10□□□□□ -0.81
SNF8-216ENST00000573795 C4orf26Q17RF5 130 aa9.98□□□□□ -0.81
SNF8-216ENST00000573795 TMA7Q9Y2S6 64 aaKnown RBP9.98□□□□□ -0.81
SNF8-216ENST00000573795 A6NN06 94 aa9.95□□□□□ -0.82
SNF8-216ENST00000573795 C5orf47Q569G3 176 aa9.93□□□□□ -0.82
SNF8-216ENST00000573795 BPY2O14599 106 aa9.92□□□□□ -0.82
SNF8-216ENST00000573795 Q8N9L7 120 aa9.91□□□□□ -0.82
SNF8-216ENST00000573795 HCG22E2RYF7 251 aa9.9□□□□□ -0.82
SNF8-216ENST00000573795 KRTAP19-8Q3LI54 63 aa9.9□□□□□ -0.82
SNF8-216ENST00000573795 FAM236AA0A1B0GUQ0 79 aa9.89□□□□□ -0.83
SNF8-216ENST00000573795 FAM236BA0A1B0GV22 79 aa9.89□□□□□ -0.83
SNF8-216ENST00000573795 KRTAP3-1Q9BYR8 98 aa9.89□□□□□ -0.83
SNF8-216ENST00000573795 Q5VV11 94 aa9.88□□□□□ -0.83
SNF8-216ENST00000573795 CASC2Q6XLA1 102 aa9.88□□□□□ -0.83
SNF8-216ENST00000573795 SPRR2GQ9BYE4 73 aa9.88□□□□□ -0.83
SNF8-216ENST00000573795 H3BT86 120 aa9.85□□□□□ -0.83
SNF8-216ENST00000573795 KRTAP10-5P60370 271 aa9.82□□□□□ -0.84
SNF8-216ENST00000573795 MDN1Q9NU22 5596 aa9.82□□□□□ -0.84
SNF8-216ENST00000573795 CXCL6P80162 114 aa9.81□□□□□ -0.84
SNF8-216ENST00000573795 S4R3F8 94 aa9.81□□□□□ -0.84
SNF8-216ENST00000573795 KMT2DO14686 5537 aa9.79□□□□□ -0.84
SNF8-216ENST00000573795 LCA10Q71F78 164 aa9.78□□□□□ -0.84
SNF8-216ENST00000573795 KRTAP20-1Q3LI63 56 aa9.76□□□□□ -0.85
SNF8-216ENST00000573795 CSAG1Q6PB30 78 aa9.76□□□□□ -0.85
SNF8-216ENST00000573795 KRTAP5-9P26371 169 aa9.75□□□□□ -0.85
SNF8-216ENST00000573795 BATFQ16520 125 aa9.74□□□□□ -0.85
SNF8-216ENST00000573795 C1orf64Q8NEQ6 169 aa9.72□□□□□ -0.85
SNF8-216ENST00000573795 C9orf118A6NHY6 69 aa9.71□□□□□ -0.86
SNF8-216ENST00000573795 A0A1W2PPM0 123 aa9.7□□□□□ -0.86
SNF8-216ENST00000573795 TSTD3H0UI37 97 aa9.7□□□□□ -0.86
SNF8-216ENST00000573795 KLKP1Q107X0 134 aa9.69□□□□□ -0.86
SNF8-216ENST00000573795 TAX1BP3O14907 124 aa9.68□□□□□ -0.86
SNF8-216ENST00000573795 SMIM6P0DI80 62 aa9.66□□□□□ -0.86
SNF8-216ENST00000573795 KRTAP3-3Q9BYR6 98 aa9.65□□□□□ -0.86
SNF8-216ENST00000573795 SMCPP49901 116 aaPredicted RBP9.61□□□□□ -0.87
SNF8-216ENST00000573795 UBL5Q9BZL1 73 aa9.54□□□□□ -0.88
SNF8-216ENST00000573795 A0A087WVE0 104 aa9.51□□□□□ -0.89
SNF8-216ENST00000573795 SPCS1Q9Y6A9 102 aa9.51□□□□□ -0.89
SNF8-216ENST00000573795 TP53AIP1Q9HCN2 124 aa9.49□□□□□ -0.89
SNF8-216ENST00000573795 CRIPTQ9P021 101 aa9.49□□□□□ -0.89
SNF8-216ENST00000573795 IMUPQ9GZP8 106 aa9.47□□□□□ -0.89
SNF8-216ENST00000573795 PRO0461Q9UI25 63 aa9.46□□□□□ -0.9
SNF8-216ENST00000573795 CYP4F30PQ9H0H9 118 aa9.43□□□□□ -0.9
SNF8-216ENST00000573795 KRTAP2-3P0C7H8 128 aa9.39□□□□□ -0.91
SNF8-216ENST00000573795 KRTAP2-4Q9BYR9 128 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms