RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 Q6JHZ5 121 aa5.27□□□□□ -1.57
NDE1-207ENST00000573203 SMIM29Q86T20 159 aa5.26□□□□□ -1.57
NDE1-207ENST00000573203 UBL5Q9BZL1 73 aa5.26□□□□□ -1.57
NDE1-207ENST00000573203 ST20-AS1Q8NBB2 130 aa5.25□□□□□ -1.57
NDE1-207ENST00000573203 DEFB105AQ8NG35 78 aa5.25□□□□□ -1.57
NDE1-207ENST00000573203 RETNLBQ9BQ08 111 aa5.25□□□□□ -1.57
NDE1-207ENST00000573203 PCP4P48539 62 aa5.24□□□□□ -1.57
NDE1-207ENST00000573203 LINC00483Q53H64 154 aa5.24□□□□□ -1.57
NDE1-207ENST00000573203 SPAG11AQ6PDA7 123 aa5.24□□□□□ -1.57
NDE1-207ENST00000573203 Q8NBF4 154 aa5.23□□□□□ -1.57
NDE1-207ENST00000573203 IGLV9-49A0A0B4J1Y8 123 aa5.22□□□□□ -1.57
NDE1-207ENST00000573203 F8WEM9 126 aa5.22□□□□□ -1.57
NDE1-207ENST00000573203 A0A1B0GV72 72 aa5.21□□□□□ -1.58
NDE1-207ENST00000573203 CXCL6P80162 114 aa5.21□□□□□ -1.58
NDE1-207ENST00000573203 MOBPQ13875 183 aa5.21□□□□□ -1.58
NDE1-207ENST00000573203 Q6ZVQ6 151 aa5.2□□□□□ -1.58
NDE1-207ENST00000573203 IGLV7-46A0A075B6I9 117 aa5.19□□□□□ -1.58
NDE1-207ENST00000573203 A0A1W2PNM2 257 aa5.19□□□□□ -1.58
NDE1-207ENST00000573203 SPINK1P00995 79 aa5.19□□□□□ -1.58
NDE1-207ENST00000573203 SSBP3-AS1Q7Z2R9 100 aa5.19□□□□□ -1.58
NDE1-207ENST00000573203 NREPQ16612 68 aa5.18□□□□□ -1.58
NDE1-207ENST00000573203 C9orf153Q5TBE3 101 aa5.18□□□□□ -1.58
NDE1-207ENST00000573203 HIST1H4AP62805 103 aaKnown RBP5.17□□□□□ -1.58
NDE1-207ENST00000573203 TPRXLQ17RH7 258 aa5.17□□□□□ -1.58
NDE1-207ENST00000573203 IGFL1Q6UW32 110 aa5.17□□□□□ -1.58
NDE1-207ENST00000573203 FP248Q71RG6 208 aaPredicted RBP5.16□□□□□ -1.58
NDE1-207ENST00000573203 IGKV3D-7A0A0C4DH55 119 aa5.15□□□□□ -1.59
NDE1-207ENST00000573203 RPS29P62273 56 aaKnown RBP5.14□□□□□ -1.59
NDE1-207ENST00000573203 FAM236AA0A1B0GUQ0 79 aa5.12□□□□□ -1.59
NDE1-207ENST00000573203 FAM236BA0A1B0GV22 79 aa5.12□□□□□ -1.59
NDE1-207ENST00000573203 ATOX1O00244 68 aa5.12□□□□□ -1.59
NDE1-207ENST00000573203 BPY2O14599 106 aa5.12□□□□□ -1.59
NDE1-207ENST00000573203 ANAPC13Q9BS18 74 aa5.12□□□□□ -1.59
NDE1-207ENST00000573203 MUC2Q02817 5179 aa5.1□□□□□ -1.59
NDE1-207ENST00000573203 HRCT1Q6UXD1 115 aa5.1□□□□□ -1.59
NDE1-207ENST00000573203 A0A0U1RQV1 116 aa5.09□□□□□ -1.59
NDE1-207ENST00000573203 CD164Q04900 197 aa5.09□□□□□ -1.59
NDE1-207ENST00000573203 KRTAP13-3Q3SY46 172 aa5.09□□□□□ -1.59
NDE1-207ENST00000573203 SMIM20Q8N5G0 67 aa5.09□□□□□ -1.59
NDE1-207ENST00000573203 LIMD2Q9BT23 127 aa5.08□□□□□ -1.6
NDE1-207ENST00000573203 MUC17Q685J3 4493 aa5.07□□□□□ -1.6
NDE1-207ENST00000573203 A0A087WSZ3 146 aa5.07□□□□□ -1.6
NDE1-207ENST00000573203 A0A087WVE0 104 aa5.07□□□□□ -1.6
NDE1-207ENST00000573203 J3KT08 172 aa5.07□□□□□ -1.6
NDE1-207ENST00000573203 IGKV4-1P06312 121 aa5.07□□□□□ -1.6
NDE1-207ENST00000573203 LINC00472Q9H8W2 130 aa5.07□□□□□ -1.6
NDE1-207ENST00000573203 SS18L2Q9UHA2 77 aa5.07□□□□□ -1.6
NDE1-207ENST00000573203 DSCR10P59022 87 aa5.06□□□□□ -1.6
NDE1-207ENST00000573203 KRTAP15-1Q3LI76 137 aa5.06□□□□□ -1.6
NDE1-207ENST00000573203 SERP2Q8N6R1 65 aa5.06□□□□□ -1.6
NDE1-207ENST00000573203 A0A0G2JQZ4 141 aa5.05□□□□□ -1.6
NDE1-207ENST00000573203 UQCRQO14949 82 aa5.05□□□□□ -1.6
NDE1-207ENST00000573203 COX7CP15954 63 aa5.05□□□□□ -1.6
NDE1-207ENST00000573203 Q5XG85 94 aa5.04□□□□□ -1.6
NDE1-207ENST00000573203 ASB16-AS1Q495Z4 193 aa5.03□□□□□ -1.6
NDE1-207ENST00000573203 TRAV7A0A075B6U4 112 aa5.02□□□□□ -1.61
NDE1-207ENST00000573203 SEC61BP60468 96 aaKnown RBP5.02□□□□□ -1.61
NDE1-207ENST00000573203 A8MWP4 228 aa5.01□□□□□ -1.61
NDE1-207ENST00000573203 PRR15Q8IV56 129 aa5.01□□□□□ -1.61
NDE1-207ENST00000573203 Q96NJ1 140 aa5□□□□□ -1.61
NDE1-207ENST00000573203 C9orf92A6NGG3 77 aa4.99□□□□□ -1.61
NDE1-207ENST00000573203 CCDC179H3BU77 68 aa4.99□□□□□ -1.61
NDE1-207ENST00000573203 K7EQZ3 153 aa4.99□□□□□ -1.61
NDE1-207ENST00000573203 NDUFB1O75438 58 aa4.99□□□□□ -1.61
NDE1-207ENST00000573203 Q8N9L7 120 aa4.99□□□□□ -1.61
NDE1-207ENST00000573203 C1orf195Q5TG92 126 aa4.98□□□□□ -1.61
NDE1-207ENST00000573203 OCR1Q9BZK8 76 aa4.98□□□□□ -1.61
NDE1-207ENST00000573203 HCG22E2RYF7 251 aa4.97□□□□□ -1.61
NDE1-207ENST00000573203 FAT4Q6V0I7 4981 aa4.97□□□□□ -1.61
NDE1-207ENST00000573203 DEFB116Q30KQ4 102 aa4.95□□□□□ -1.62
NDE1-207ENST00000573203 KRTAP4-1Q9BYQ7 146 aa4.95□□□□□ -1.62
NDE1-207ENST00000573203 KLKP1Q107X0 134 aa4.94□□□□□ -1.62
NDE1-207ENST00000573203 A0A1B0GVX0 72 aa4.93□□□□□ -1.62
NDE1-207ENST00000573203 C5orf47Q569G3 176 aa4.92□□□□□ -1.62
NDE1-207ENST00000573203 PCOTHQ58A44 107 aa4.92□□□□□ -1.62
NDE1-207ENST00000573203 KRTAP5-3Q6L8H2 238 aa4.92□□□□□ -1.62
NDE1-207ENST00000573203 CASC2Q6XLA1 102 aa4.92□□□□□ -1.62
NDE1-207ENST00000573203 MMP24-AS1A0A0U1RRL7 71 aa4.91□□□□□ -1.62
NDE1-207ENST00000573203 NDUFC1O43677 76 aa4.91□□□□□ -1.62
NDE1-207ENST00000573203 C8orf87E5RJ46 101 aa4.9□□□□□ -1.63
NDE1-207ENST00000573203 TP53AIP1Q9HCN2 124 aa4.9□□□□□ -1.63
NDE1-207ENST00000573203 C8orf17Q9NRJ1 99 aa4.9□□□□□ -1.63
NDE1-207ENST00000573203 hDV103S1A0JD37 113 aa4.89□□□□□ -1.63
NDE1-207ENST00000573203 H3BPC8 53 aa4.89□□□□□ -1.63
NDE1-207ENST00000573203 C20orf197Q8N268 126 aa4.89□□□□□ -1.63
NDE1-207ENST00000573203 TMEM254Q8TBM7 123 aa4.88□□□□□ -1.63
NDE1-207ENST00000573203 TMEM258P61165 79 aa4.87□□□□□ -1.63
NDE1-207ENST00000573203 RPL37P61927 97 aaKnown RBP4.87□□□□□ -1.63
NDE1-207ENST00000573203 WFDC13Q8IUB5 93 aa4.87□□□□□ -1.63
NDE1-207ENST00000573203 IGHV6-1A0A0B4J1U7 121 aa4.85□□□□□ -1.63
NDE1-207ENST00000573203 H7BZZ5 65 aa4.85□□□□□ -1.63
NDE1-207ENST00000573203 ZCCHC13Q8WW36 166 aaKnown RBP4.85□□□□□ -1.63
NDE1-207ENST00000573203 MRPL34Q9BQ48 92 aaKnown RBP4.85□□□□□ -1.63
NDE1-207ENST00000573203 MP68P56378 58 aa4.84□□□□□ -1.63
NDE1-207ENST00000573203 LINC00313P59037 77 aa4.83□□□□□ -1.64
NDE1-207ENST00000573203 RPS28P62857 69 aaKnown RBP4.83□□□□□ -1.64
NDE1-207ENST00000573203 CYSTM1Q9H1C7 97 aa4.83□□□□□ -1.64
NDE1-207ENST00000573203 ATP5EP56381 51 aaPredicted RBP4.81□□□□□ -1.64
NDE1-207ENST00000573203 NOTCH2NLQ7Z3S9 236 aa4.81□□□□□ -1.64
NDE1-207ENST00000573203 Q8N9P0 234 aaPredicted RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms