RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 SPINK6Q6UWN8 80 aa6.66□□□□□ -1.34
RPAIN-212ENST00000573126 IGLV7-43P04211 117 aa6.65□□□□□ -1.35
RPAIN-212ENST00000573126 SEC61GP60059 68 aa6.65□□□□□ -1.35
RPAIN-212ENST00000573126 V9GYY9 64 aa6.65□□□□□ -1.35
RPAIN-212ENST00000573126 CIRBP-AS1Q8TBR5 109 aa6.64□□□□□ -1.35
RPAIN-212ENST00000573126 TP53AIP1Q9HCN2 124 aa6.64□□□□□ -1.35
RPAIN-212ENST00000573126 DNAH11Q96DT5 4516 aa6.63□□□□□ -1.35
RPAIN-212ENST00000573126 KRTAP10-2P60368 255 aa6.62□□□□□ -1.35
RPAIN-212ENST00000573126 MRPL34Q9BQ48 92 aaKnown RBP6.62□□□□□ -1.35
RPAIN-212ENST00000573126 ALMS1Q8TCU4 4167 aa6.61□□□□□ -1.35
RPAIN-212ENST00000573126 CD164Q04900 197 aa6.61□□□□□ -1.35
RPAIN-212ENST00000573126 A8MUN3 132 aa6.6□□□□□ -1.35
RPAIN-212ENST00000573126 DNAH5Q8TE73 4624 aa6.6□□□□□ -1.35
RPAIN-212ENST00000573126 IGLV7-46A0A075B6I9 117 aa6.59□□□□□ -1.35
RPAIN-212ENST00000573126 C1orf195Q5TG92 126 aa6.59□□□□□ -1.35
RPAIN-212ENST00000573126 COA5Q86WW8 74 aa6.58□□□□□ -1.36
RPAIN-212ENST00000573126 Q8N9P0 234 aaPredicted RBP6.56□□□□□ -1.36
RPAIN-212ENST00000573126 HYDINQ4G0P3 5121 aa6.55□□□□□ -1.36
RPAIN-212ENST00000573126 Q5W150 140 aa6.55□□□□□ -1.36
RPAIN-212ENST00000573126 LRP1BQ9NZR2 4599 aa6.54□□□□□ -1.36
RPAIN-212ENST00000573126 Q5VV11 94 aa6.53□□□□□ -1.36
RPAIN-212ENST00000573126 SSBP3-AS1Q7Z2R9 100 aa6.52□□□□□ -1.37
RPAIN-212ENST00000573126 KRTAP10-1P60331 282 aa6.52□□□□□ -1.37
RPAIN-212ENST00000573126 PRR15LQ9BU68 103 aa6.51□□□□□ -1.37
RPAIN-212ENST00000573126 KRTAP13-2Q52LG2 175 aa6.5□□□□□ -1.37
RPAIN-212ENST00000573126 LIMD2Q9BT23 127 aa6.5□□□□□ -1.37
RPAIN-212ENST00000573126 A8MU10 97 aa6.5□□□□□ -1.37
RPAIN-212ENST00000573126 CHKB-CPT1BH3BT56 60 aa6.48□□□□□ -1.37
RPAIN-212ENST00000573126 KRTAP13-3Q3SY46 172 aa6.48□□□□□ -1.37
RPAIN-212ENST00000573126 Q6ZSA8 131 aa6.48□□□□□ -1.37
RPAIN-212ENST00000573126 LOC101927531A0A1B0GV80 90 aa6.48□□□□□ -1.37
RPAIN-212ENST00000573126 HRES1P13985 223 aa6.48□□□□□ -1.37
RPAIN-212ENST00000573126 SPAG11AQ6PDA7 123 aa6.48□□□□□ -1.37
RPAIN-212ENST00000573126 VPS13BQ7Z7G8 4022 aa6.47□□□□□ -1.37
RPAIN-212ENST00000573126 FAT2Q9NYQ8 4349 aa6.47□□□□□ -1.37
RPAIN-212ENST00000573126 PKD1P98161 4303 aa6.47□□□□□ -1.37
RPAIN-212ENST00000573126 RETNLBQ9BQ08 111 aa6.47□□□□□ -1.37
RPAIN-212ENST00000573126 LINC00313P59037 77 aa6.46□□□□□ -1.38
RPAIN-212ENST00000573126 C8orf87E5RJ46 101 aa6.45□□□□□ -1.38
RPAIN-212ENST00000573126 KRTAP1-4P0C5Y4 121 aa6.43□□□□□ -1.38
RPAIN-212ENST00000573126 PMAIP1Q13794 54 aa6.41□□□□□ -1.38
RPAIN-212ENST00000573126 PKHD1P08F94 4074 aa6.41□□□□□ -1.38
RPAIN-212ENST00000573126 Q75L30 129 aa6.41□□□□□ -1.38
RPAIN-212ENST00000573126 PRR26Q8N8Z3 221 aa6.41□□□□□ -1.38
RPAIN-212ENST00000573126 A6NED7 52 aa6.4□□□□□ -1.38
RPAIN-212ENST00000573126 FAM229AH3BQW9 127 aa6.39□□□□□ -1.39
RPAIN-212ENST00000573126 PLA2G1BP04054 148 aaKnown RBP6.39□□□□□ -1.39
RPAIN-212ENST00000573126 LINC01558Q9Y6Z2 57 aa6.39□□□□□ -1.39
RPAIN-212ENST00000573126 KRTAP16-1A8MUX0 517 aa6.37□□□□□ -1.39
RPAIN-212ENST00000573126 LCA10Q71F78 164 aa6.37□□□□□ -1.39
RPAIN-212ENST00000573126 ACYP2P14621 99 aa6.35□□□□□ -1.39
RPAIN-212ENST00000573126 TYMSOSQ8TAI1 123 aa6.35□□□□□ -1.39
RPAIN-212ENST00000573126 SPTSSBQ8NFR3 76 aa6.35□□□□□ -1.39
RPAIN-212ENST00000573126 C4orf48Q5BLP8 95 aa6.34□□□□□ -1.39
RPAIN-212ENST00000573126 IGKV2-30P06310 120 aa6.34□□□□□ -1.39
RPAIN-212ENST00000573126 DMAC1Q96GE9 116 aa6.34□□□□□ -1.4
RPAIN-212ENST00000573126 IGKV2D-30A0A075B6S6 120 aa6.32□□□□□ -1.4
RPAIN-212ENST00000573126 SPINK7P58062 85 aa6.32□□□□□ -1.4
RPAIN-212ENST00000573126 LCE2DQ5TA82 110 aaPredicted RBP6.31□□□□□ -1.4
RPAIN-212ENST00000573126 SPINK1P00995 79 aa6.29□□□□□ -1.4
RPAIN-212ENST00000573126 CDC42SE1Q9NRR8 79 aa6.29□□□□□ -1.4
RPAIN-212ENST00000573126 SMR3BP02814 79 aaPredicted RBP6.28□□□□□ -1.4
RPAIN-212ENST00000573126 SACSQ9NZJ4 4579 aa6.28□□□□□ -1.4
RPAIN-212ENST00000573126 ATP11AUNQ6ZP68 121 aa6.27□□□□□ -1.41
RPAIN-212ENST00000573126 LINC00304Q8N9R0 145 aa6.26□□□□□ -1.41
RPAIN-212ENST00000573126 FAT1Q14517 4588 aa6.24□□□□□ -1.41
RPAIN-212ENST00000573126 KMT2CQ8NEZ4 4911 aaKnown RBP6.24□□□□□ -1.41
RPAIN-212ENST00000573126 DYNC1H1Q14204 4646 aaKnown RBP6.23□□□□□ -1.41
RPAIN-212ENST00000573126 C7orf65Q6ZTY9 151 aa6.23□□□□□ -1.41
RPAIN-212ENST00000573126 A0A1B0GU69 56 aa6.2□□□□□ -1.42
RPAIN-212ENST00000573126 C9orf92A6NGG3 77 aa6.18□□□□□ -1.42
RPAIN-212ENST00000573126 A6NN06 94 aa6.18□□□□□ -1.42
RPAIN-212ENST00000573126 Q8N1X5 172 aa6.18□□□□□ -1.42
RPAIN-212ENST00000573126 KTN1-AS1Q86SY8 53 aa6.17□□□□□ -1.42
RPAIN-212ENST00000573126 RPS29P62273 56 aaKnown RBP6.17□□□□□ -1.42
RPAIN-212ENST00000573126 APOBP04114 4563 aaKnown RBP6.15□□□□□ -1.43
RPAIN-212ENST00000573126 RYR3Q15413 4870 aa6.14□□□□□ -1.43
RPAIN-212ENST00000573126 A0A1B0GVY2 172 aa6.13□□□□□ -1.43
RPAIN-212ENST00000573126 KRTAP10-4P60372 401 aaPredicted RBP6.12□□□□□ -1.43
RPAIN-212ENST00000573126 RBM12B-AS1Q9P1G2 102 aa6.12□□□□□ -1.43
RPAIN-212ENST00000573126 KRTAP3-3Q9BYR6 98 aa6.12□□□□□ -1.43
RPAIN-212ENST00000573126 KRTAP3-2Q9BYR7 98 aa6.12□□□□□ -1.43
RPAIN-212ENST00000573126 PKHD1L1Q86WI1 4243 aa6.09□□□□□ -1.43
RPAIN-212ENST00000573126 RYR2Q92736 4967 aa6.08□□□□□ -1.44
RPAIN-212ENST00000573126 C20orf166-AS1Q96NR2 134 aa6.08□□□□□ -1.44
RPAIN-212ENST00000573126 UQCR11O14957 56 aa6.07□□□□□ -1.44
RPAIN-212ENST00000573126 A8MUU9 505 aa6.07□□□□□ -1.44
RPAIN-212ENST00000573126 MIR22HGQ0VDD5 57 aa6.06□□□□□ -1.44
RPAIN-212ENST00000573126 SPATA8Q6RVD6 105 aa6.06□□□□□ -1.44
RPAIN-212ENST00000573126 FLG2Q5D862 2391 aaPredicted RBP6.04□□□□□ -1.44
RPAIN-212ENST00000573126 KRTAP3-1Q9BYR8 98 aa6.02□□□□□ -1.45
RPAIN-212ENST00000573126 LRP1Q07954 4544 aaKnown RBP6.02□□□□□ -1.45
RPAIN-212ENST00000573126 ADM2Q7Z4H4 148 aa5.96□□□□□ -1.46
RPAIN-212ENST00000573126 PRAC1Q96KF2 57 aa5.96□□□□□ -1.46
RPAIN-212ENST00000573126 DMBT1Q9UGM3 2413 aaPredicted RBP5.96□□□□□ -1.46
RPAIN-212ENST00000573126 EPPK1P58107 5090 aaKnown RBP5.94□□□□□ -1.46
RPAIN-212ENST00000573126 TNXBP22105 4242 aa5.93□□□□□ -1.46
RPAIN-212ENST00000573126 MYCBP2O75592 4640 aa5.92□□□□□ -1.46
RPAIN-212ENST00000573126 FAT3Q8TDW7 4589 aa5.91□□□□□ -1.46
RPAIN-212ENST00000573126 HSPG2P98160 4391 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms