RNA–Protein interactions for RNA: ENST00000572949.5

USP6-204, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 7,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-204ENST00000572949 CFAP47Q6ZTR5 3102 aa5.4□□□□□ -1.54
USP6-204ENST00000572949 CELSR2Q9HCU4 2923 aa5.39□□□□□ -1.55
USP6-204ENST00000572949 KRTAP10-8P60410 259 aa5.38□□□□□ -1.55
USP6-204ENST00000572949 TACC2O95359 2948 aa5.38□□□□□ -1.55
USP6-204ENST00000572949 ADGRG4Q8IZF6 3080 aa5.37□□□□□ -1.55
USP6-204ENST00000572949 TENM1Q9UKZ4 2725 aa5.37□□□□□ -1.55
USP6-204ENST00000572949 SZT2Q5T011 3432 aa5.36□□□□□ -1.55
USP6-204ENST00000572949 C10orf95Q9H7T3 257 aa5.34□□□□□ -1.55
USP6-204ENST00000572949 NF1P21359 2839 aa5.34□□□□□ -1.55
USP6-204ENST00000572949 HIVEP1P15822 2718 aa5.34□□□□□ -1.55
USP6-204ENST00000572949 KRTAP21-3Q3LHN1 58 aa5.34□□□□□ -1.55
USP6-204ENST00000572949 TNRC18O15417 2968 aaPredicted RBP5.33□□□□□ -1.56
USP6-204ENST00000572949 KRTAP16-1A8MUX0 517 aa5.33□□□□□ -1.56
USP6-204ENST00000572949 EYSQ5T1H1 3165 aa5.33□□□□□ -1.56
USP6-204ENST00000572949 NBEAQ8NFP9 2946 aa5.31□□□□□ -1.56
USP6-204ENST00000572949 ATMQ13315 3056 aa5.31□□□□□ -1.56
USP6-204ENST00000572949 A8MU10 97 aa5.31□□□□□ -1.56
USP6-204ENST00000572949 A0A1B0GVY2 172 aa5.3□□□□□ -1.56
USP6-204ENST00000572949 NOTCH2NLQ7Z3S9 236 aa5.29□□□□□ -1.56
USP6-204ENST00000572949 PRO2289Q9P1D8 64 aa5.29□□□□□ -1.56
USP6-204ENST00000572949 NIPBLQ6KC79 2804 aaeCLIP5.28□□□□□ -1.56
USP6-204ENST00000572949 KRTAP4-16G5E9R7 235 aaPredicted RBP5.28□□□□□ -1.56
USP6-204ENST00000572949 DMXL1Q9Y485 3027 aa5.27□□□□□ -1.57
USP6-204ENST00000572949 KRTAP10-10P60014 251 aa5.26□□□□□ -1.57
USP6-204ENST00000572949 P0C880 135 aa5.25□□□□□ -1.57
USP6-204ENST00000572949 Q6ZRN7 208 aaPredicted RBP5.24□□□□□ -1.57
USP6-204ENST00000572949 DCHS2Q6V1P9 2916 aa5.24□□□□□ -1.57
USP6-204ENST00000572949 KRTAP13-2Q52LG2 175 aa5.23□□□□□ -1.57
USP6-204ENST00000572949 KRTAP29-1A8MX34 341 aaPredicted RBP5.23□□□□□ -1.57
USP6-204ENST00000572949 KRTAP25-1Q3LHN0 102 aa5.22□□□□□ -1.57
USP6-204ENST00000572949 KRTAP11-1Q8IUC1 163 aa5.2□□□□□ -1.58
USP6-204ENST00000572949 A6NN06 94 aa5.2□□□□□ -1.58
USP6-204ENST00000572949 TENM4Q6N022 2769 aa5.18□□□□□ -1.58
USP6-204ENST00000572949 TENM3Q9P273 2699 aa5.17□□□□□ -1.58
USP6-204ENST00000572949 NDUFAF8A1L188 74 aa5.16□□□□□ -1.58
USP6-204ENST00000572949 CELSR1Q9NYQ6 3014 aa5.15□□□□□ -1.58
USP6-204ENST00000572949 PP632Q6XCG6 107 aa5.15□□□□□ -1.58
USP6-204ENST00000572949 SPTBN5Q9NRC6 3674 aaKnown RBP5.14□□□□□ -1.59
USP6-204ENST00000572949 ZANQ9Y493 2812 aa5.14□□□□□ -1.59
USP6-204ENST00000572949 WDFY3Q8IZQ1 3526 aa5.14□□□□□ -1.59
USP6-204ENST00000572949 FBN2P35556 2912 aa5.12□□□□□ -1.59
USP6-204ENST00000572949 PKD1L1Q8TDX9 2849 aa5.11□□□□□ -1.59
USP6-204ENST00000572949 XP32Q5T750 250 aa5.11□□□□□ -1.59
USP6-204ENST00000572949 MYO15AQ9UKN7 3530 aa5.11□□□□□ -1.59
USP6-204ENST00000572949 TPRXLQ17RH7 258 aa5.08□□□□□ -1.6
USP6-204ENST00000572949 NBPF19A0A087WUL8 3843 aa5.08□□□□□ -1.6
USP6-204ENST00000572949 LOC400499M0QZD8 3231 aa5.07□□□□□ -1.6
USP6-204ENST00000572949 KRTAP13-1Q8IUC0 172 aa5.06□□□□□ -1.6
USP6-204ENST00000572949 PDZD2O15018 2839 aa5.06□□□□□ -1.6
USP6-204ENST00000572949 VWFP04275 2813 aa5.05□□□□□ -1.6
USP6-204ENST00000572949 ASPMQ8IZT6 3477 aa5.04□□□□□ -1.6
USP6-204ENST00000572949 KRTAP7-1Q8IUC3 87 aa5.02□□□□□ -1.61
USP6-204ENST00000572949 ZFHX4Q86UP3 3567 aa4.96□□□□□ -1.62
USP6-204ENST00000572949 ZFHX3Q15911 3703 aa4.95□□□□□ -1.62
USP6-204ENST00000572949 LAMA5O15230 3695 aa4.94□□□□□ -1.62
USP6-204ENST00000572949 TGP01266 2768 aa4.92□□□□□ -1.62
USP6-204ENST00000572949 KRTAP1-4P0C5Y4 121 aa4.9□□□□□ -1.63
USP6-204ENST00000572949 HRNRQ86YZ3 2850 aaPredicted RBP4.89□□□□□ -1.63
USP6-204ENST00000572949 MXRA5Q9NR99 2828 aa4.89□□□□□ -1.63
USP6-204ENST00000572949 KRTAP13-3Q3SY46 172 aa4.87□□□□□ -1.63
USP6-204ENST00000572949 DCHS1Q96JQ0 3298 aa4.87□□□□□ -1.63
USP6-204ENST00000572949 SRRM2Q9UQ35 2752 aaKnown RBP4.86□□□□□ -1.63
USP6-204ENST00000572949 TENM2Q9NT68 2774 aa4.85□□□□□ -1.63
USP6-204ENST00000572949 RELNP78509 3460 aa4.83□□□□□ -1.64
USP6-204ENST00000572949 COL7A1Q02388 2944 aa4.83□□□□□ -1.64
USP6-204ENST00000572949 H0YAA0 97 aa4.79□□□□□ -1.64
USP6-204ENST00000572949 SPENQ96T58 3664 aaKnown RBP4.76□□□□□ -1.65
USP6-204ENST00000572949 KRTAP12-2P59991 146 aa4.71□□□□□ -1.66
USP6-204ENST00000572949 CSMD1Q96PZ7 3565 aa4.71□□□□□ -1.66
USP6-204ENST00000572949 SMG1Q96Q15 3661 aaKnown RBP4.69□□□□□ -1.66
USP6-204ENST00000572949 FBN1P35555 2871 aaKnown RBP4.68□□□□□ -1.66
USP6-204ENST00000572949 KRTAP15-1Q3LI76 137 aa4.67□□□□□ -1.66
USP6-204ENST00000572949 DMDP11532 3685 aa4.66□□□□□ -1.66
USP6-204ENST00000572949 MEGF8Q7Z7M0 2845 aa4.66□□□□□ -1.66
USP6-204ENST00000572949 CUBNO60494 3623 aa4.63□□□□□ -1.67
USP6-204ENST00000572949 KRTAP13-4Q3LI77 160 aa4.62□□□□□ -1.67
USP6-204ENST00000572949 CRCT1Q9UGL9 99 aa4.6□□□□□ -1.67
USP6-204ENST00000572949 FBN3Q75N90 2809 aa4.54□□□□□ -1.68
USP6-204ENST00000572949 TRRAPQ9Y4A5 3859 aa4.51□□□□□ -1.69
USP6-204ENST00000572949 SVEP1Q4LDE5 3571 aa4.5□□□□□ -1.69
USP6-204ENST00000572949 MUC3AQ02505 3323 aa4.48□□□□□ -1.69
USP6-204ENST00000572949 KRTAP12-1P59990 96 aa4.45□□□□□ -1.7
USP6-204ENST00000572949 VPS13CQ709C8 3753 aa4.44□□□□□ -1.7
USP6-204ENST00000572949 OTOGQ6ZRI0 2925 aa4.43□□□□□ -1.7
USP6-204ENST00000572949 KRTAP10-12P60413 245 aa4.39□□□□□ -1.71
USP6-204ENST00000572949 CSMD2Q7Z408 3487 aa4.37□□□□□ -1.71
USP6-204ENST00000572949 BSNQ9UPA5 3926 aa4.31□□□□□ -1.72
USP6-204ENST00000572949 CSMD3Q7Z407 3707 aa4.29□□□□□ -1.72
USP6-204ENST00000572949 LORP23490 312 aaPredicted RBP4.24□□□□□ -1.73
USP6-204ENST00000572949 INE1O15225 51 aa4.23□□□□□ -1.73
USP6-204ENST00000572949 KRTAP3-1Q9BYR8 98 aa4.22□□□□□ -1.73
USP6-204ENST00000572949 KRTAP10-6P60371 365 aaPredicted RBP4.22□□□□□ -1.73
USP6-204ENST00000572949 KRTAP8-1Q8IUC2 63 aa4.22□□□□□ -1.73
USP6-204ENST00000572949 KRTAP12-3P60328 96 aa4.19□□□□□ -1.74
USP6-204ENST00000572949 MT1HL1P0DM35 61 aa4.16□□□□□ -1.74
USP6-204ENST00000572949 KRTAP10-5P60370 271 aa4.15□□□□□ -1.75
USP6-204ENST00000572949 AKAP9Q99996 3911 aa4.15□□□□□ -1.75
USP6-204ENST00000572949 KRTAP4-5Q9BYR2 181 aa4.13□□□□□ -1.75
USP6-204ENST00000572949 ZNF469Q96JG9 3925 aaPredicted RBP4.11□□□□□ -1.75
USP6-204ENST00000572949 LCE3AQ5TA76 89 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms