RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 LYRM7Q5U5X0 104 aa8.32□□□□□ -1.08
NDE1-205ENST00000572756 TRBV20-1A0A075B6N2 111 aa8.31□□□□□ -1.08
NDE1-205ENST00000572756 IGHV6-1A0A0B4J1U7 121 aa8.31□□□□□ -1.08
NDE1-205ENST00000572756 LORP23490 312 aaPredicted RBP8.31□□□□□ -1.08
NDE1-205ENST00000572756 A0A1B0GVX0 72 aa8.3□□□□□ -1.08
NDE1-205ENST00000572756 KRTAP10-6P60371 365 aaPredicted RBP8.3□□□□□ -1.08
NDE1-205ENST00000572756 A0A1B0GW54 56 aa8.28□□□□□ -1.08
NDE1-205ENST00000572756 C8orf87E5RJ46 101 aa8.28□□□□□ -1.08
NDE1-205ENST00000572756 J3KT08 172 aa8.28□□□□□ -1.08
NDE1-205ENST00000572756 PDE6GP18545 87 aa8.27□□□□□ -1.09
NDE1-205ENST00000572756 C9orf118A6NHY6 69 aa8.26□□□□□ -1.09
NDE1-205ENST00000572756 TAX1BP3O14907 124 aa8.26□□□□□ -1.09
NDE1-205ENST00000572756 C14orf132Q9NPU4 83 aa8.26□□□□□ -1.09
NDE1-205ENST00000572756 M0R2T5 61 aa8.25□□□□□ -1.09
NDE1-205ENST00000572756 A0A1W2PPM0 123 aa8.22□□□□□ -1.09
NDE1-205ENST00000572756 KRTAP9-6A0A140TA67 174 aa8.2□□□□□ -1.1
NDE1-205ENST00000572756 H3BT86 120 aa8.2□□□□□ -1.1
NDE1-205ENST00000572756 A8MWP4 228 aa8.18□□□□□ -1.1
NDE1-205ENST00000572756 NDUFB1O75438 58 aa8.18□□□□□ -1.1
NDE1-205ENST00000572756 MTURNQ8N3F0 131 aa8.17□□□□□ -1.1
NDE1-205ENST00000572756 MPLKIPQ8TAP9 179 aa8.17□□□□□ -1.1
NDE1-205ENST00000572756 IGKV3D-7A0A0C4DH55 119 aa8.16□□□□□ -1.1
NDE1-205ENST00000572756 HRES1P13985 223 aa8.16□□□□□ -1.1
NDE1-205ENST00000572756 Q8N9P0 234 aaPredicted RBP8.16□□□□□ -1.1
NDE1-205ENST00000572756 C8orf17Q9NRJ1 99 aa8.16□□□□□ -1.1
NDE1-205ENST00000572756 NREPQ16612 68 aa8.14□□□□□ -1.11
NDE1-205ENST00000572756 ZCCHC13Q8WW36 166 aaKnown RBP8.14□□□□□ -1.11
NDE1-205ENST00000572756 PRR15Q8IV56 129 aa8.12□□□□□ -1.11
NDE1-205ENST00000572756 SPCS1Q9Y6A9 102 aa8.1□□□□□ -1.11
NDE1-205ENST00000572756 Q6ZVQ6 151 aa8.08□□□□□ -1.12
NDE1-205ENST00000572756 RBM12B-AS1Q9P1G2 102 aa8.08□□□□□ -1.12
NDE1-205ENST00000572756 SMCPP49901 116 aaPredicted RBP8.07□□□□□ -1.12
NDE1-205ENST00000572756 MMP24-AS1A0A0U1RRL7 71 aa8.06□□□□□ -1.12
NDE1-205ENST00000572756 FAM236DA0A1B0GTK5 79 aa8.06□□□□□ -1.12
NDE1-205ENST00000572756 FAM236CP0DP71 79 aa8.06□□□□□ -1.12
NDE1-205ENST00000572756 COL5A1-AS1Q5SY13 56 aa8.06□□□□□ -1.12
NDE1-205ENST00000572756 SPINK7P58062 85 aa8.05□□□□□ -1.12
NDE1-205ENST00000572756 CRCT1Q9UGL9 99 aa8.05□□□□□ -1.12
NDE1-205ENST00000572756 KRTAP9-8Q9BYQ0 159 aa8.04□□□□□ -1.12
NDE1-205ENST00000572756 K7EQZ3 153 aa8.03□□□□□ -1.12
NDE1-205ENST00000572756 FSIP2Q5CZC0 6907 aa8.02□□□□□ -1.13
NDE1-205ENST00000572756 TMEM254Q8TBM7 123 aa8.02□□□□□ -1.13
NDE1-205ENST00000572756 PRO0461Q9UI25 63 aa8.02□□□□□ -1.13
NDE1-205ENST00000572756 MRPL34Q9BQ48 92 aaKnown RBP8.01□□□□□ -1.13
NDE1-205ENST00000572756 BPY2O14599 106 aa8□□□□□ -1.13
NDE1-205ENST00000572756 hDV103S1A0JD37 113 aa7.99□□□□□ -1.13
NDE1-205ENST00000572756 K7EP34 96 aa7.99□□□□□ -1.13
NDE1-205ENST00000572756 WFDC13Q8IUB5 93 aa7.93□□□□□ -1.14
NDE1-205ENST00000572756 MT2AP02795 61 aa7.92□□□□□ -1.14
NDE1-205ENST00000572756 Q8N9L7 120 aa7.92□□□□□ -1.14
NDE1-205ENST00000572756 LINC00846Q9NV44 126 aa7.91□□□□□ -1.14
NDE1-205ENST00000572756 NDUFS5O43920 106 aa7.9□□□□□ -1.14
NDE1-205ENST00000572756 Q5W150 140 aa7.87□□□□□ -1.15
NDE1-205ENST00000572756 CASC2Q6XLA1 102 aa7.87□□□□□ -1.15
NDE1-205ENST00000572756 UBL5Q9BZL1 73 aa7.87□□□□□ -1.15
NDE1-205ENST00000572756 PCP4L1A6NKN8 68 aa7.86□□□□□ -1.15
NDE1-205ENST00000572756 MT1FP04733 61 aa7.86□□□□□ -1.15
NDE1-205ENST00000572756 GTF2H5Q6ZYL4 71 aa7.86□□□□□ -1.15
NDE1-205ENST00000572756 F8W1H4 67 aa7.83□□□□□ -1.16
NDE1-205ENST00000572756 HCG22E2RYF7 251 aa7.82□□□□□ -1.16
NDE1-205ENST00000572756 LCE2BO14633 110 aa7.8□□□□□ -1.16
NDE1-205ENST00000572756 ETDBQ3ZM63 59 aa7.8□□□□□ -1.16
NDE1-205ENST00000572756 C7orf65Q6ZTY9 151 aa7.8□□□□□ -1.16
NDE1-205ENST00000572756 IGKV2D-30A0A075B6S6 120 aa7.79□□□□□ -1.16
NDE1-205ENST00000572756 IGKV2-30P06310 120 aa7.79□□□□□ -1.16
NDE1-205ENST00000572756 KRTAP9-3Q9BYQ3 159 aa7.79□□□□□ -1.16
NDE1-205ENST00000572756 USH2AO75445 5202 aa7.79□□□□□ -1.16
NDE1-205ENST00000572756 KRTAP10-10P60014 251 aa7.78□□□□□ -1.16
NDE1-205ENST00000572756 CXCL6P80162 114 aa7.78□□□□□ -1.16
NDE1-205ENST00000572756 H1FX-AS1Q4G0G2 97 aa7.76□□□□□ -1.17
NDE1-205ENST00000572756 SSPOA2VEC9 5147 aa7.69□□□□□ -1.18
NDE1-205ENST00000572756 C4orf26Q17RF5 130 aa7.67□□□□□ -1.18
NDE1-205ENST00000572756 TP53AIP1Q9HCN2 124 aa7.64□□□□□ -1.19
NDE1-205ENST00000572756 ACYP1P07311 99 aa7.61□□□□□ -1.19
NDE1-205ENST00000572756 FAM240AA0A1B0GVK7 77 aa7.6□□□□□ -1.19
NDE1-205ENST00000572756 KRTAP3-1Q9BYR8 98 aa7.6□□□□□ -1.19
NDE1-205ENST00000572756 KRTAP19-1Q8IUB9 90 aa7.56□□□□□ -1.2
NDE1-205ENST00000572756 ATP5EP2Q5VTU8 51 aa7.55□□□□□ -1.2
NDE1-205ENST00000572756 FCGBPQ9Y6R7 5405 aaPredicted RBP7.53□□□□□ -1.2
NDE1-205ENST00000572756 C1orf64Q8NEQ6 169 aa7.53□□□□□ -1.2
NDE1-205ENST00000572756 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.5□□□□□ -1.21
NDE1-205ENST00000572756 CYP4F30PQ9H0H9 118 aa7.5□□□□□ -1.21
NDE1-205ENST00000572756 TRAV22A0A0B4J277 110 aa7.49□□□□□ -1.21
NDE1-205ENST00000572756 C5orf47Q569G3 176 aa7.49□□□□□ -1.21
NDE1-205ENST00000572756 S4R3F8 94 aa7.49□□□□□ -1.21
NDE1-205ENST00000572756 A0A1B0GV90 55 aa7.46□□□□□ -1.22
NDE1-205ENST00000572756 HIST1H4AP62805 103 aaKnown RBP7.46□□□□□ -1.22
NDE1-205ENST00000572756 LCA10Q71F78 164 aa7.46□□□□□ -1.22
NDE1-205ENST00000572756 KRTAP19-6Q3LI70 58 aa7.45□□□□□ -1.22
NDE1-205ENST00000572756 LOC101927531A0A1B0GV80 90 aa7.44□□□□□ -1.22
NDE1-205ENST00000572756 LINC00643Q86TS7 51 aa7.44□□□□□ -1.22
NDE1-205ENST00000572756 UQCRQO14949 82 aa7.42□□□□□ -1.22
NDE1-205ENST00000572756 CSAG1Q6PB30 78 aa7.42□□□□□ -1.22
NDE1-205ENST00000572756 A0A087WVE0 104 aa7.4□□□□□ -1.22
NDE1-205ENST00000572756 KRTAP9-7A8MTY7 169 aa7.38□□□□□ -1.23
NDE1-205ENST00000572756 H0Y9P7 68 aa7.37□□□□□ -1.23
NDE1-205ENST00000572756 ATOX1O00244 68 aa7.36□□□□□ -1.23
NDE1-205ENST00000572756 FAM236AA0A1B0GUQ0 79 aa7.35□□□□□ -1.23
NDE1-205ENST00000572756 FAM236BA0A1B0GV22 79 aa7.35□□□□□ -1.23
NDE1-205ENST00000572756 OCR1Q9BZK8 76 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms