RNA–Protein interactions for RNA: ENST00000572438.1

CHRNE-202, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 5

Gene CHRNE, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-202ENST00000572438 A0A1B0GVX0 72 aa11.79□□□□□ -0.52
CHRNE-202ENST00000572438 KRTAP29-1A8MX34 341 aaPredicted RBP11.78□□□□□ -0.52
CHRNE-202ENST00000572438 C1orf195Q5TG92 126 aa11.78□□□□□ -0.52
CHRNE-202ENST00000572438 MMP24-AS1A0A0U1RRL7 71 aa11.77□□□□□ -0.52
CHRNE-202ENST00000572438 CASC2Q6XLA1 102 aa11.77□□□□□ -0.52
CHRNE-202ENST00000572438 IGHV6-1A0A0B4J1U7 121 aa11.76□□□□□ -0.53
CHRNE-202ENST00000572438 RPS29P62273 56 aaKnown RBP11.76□□□□□ -0.53
CHRNE-202ENST00000572438 OCR1Q9BZK8 76 aa11.76□□□□□ -0.53
CHRNE-202ENST00000572438 C8orf17Q9NRJ1 99 aa11.74□□□□□ -0.53
CHRNE-202ENST00000572438 Q8N1X5 172 aa11.73□□□□□ -0.53
CHRNE-202ENST00000572438 hDV103S1A0JD37 113 aa11.71□□□□□ -0.54
CHRNE-202ENST00000572438 HERC2O95714 4834 aa11.68□□□□□ -0.54
CHRNE-202ENST00000572438 NOTCH2NLQ7Z3S9 236 aa11.67□□□□□ -0.54
CHRNE-202ENST00000572438 C8orf87E5RJ46 101 aa11.63□□□□□ -0.55
CHRNE-202ENST00000572438 C20orf197Q8N268 126 aa11.63□□□□□ -0.55
CHRNE-202ENST00000572438 KRTAP10-8P60410 259 aa11.63□□□□□ -0.55
CHRNE-202ENST00000572438 KRTAP4-5Q9BYR2 181 aa11.63□□□□□ -0.55
CHRNE-202ENST00000572438 LRP1Q07954 4544 aaKnown RBP11.62□□□□□ -0.55
CHRNE-202ENST00000572438 TMEM254Q8TBM7 123 aa11.62□□□□□ -0.55
CHRNE-202ENST00000572438 MRPL34Q9BQ48 92 aaKnown RBP11.6□□□□□ -0.55
CHRNE-202ENST00000572438 FAT3Q8TDW7 4589 aa11.59□□□□□ -0.55
CHRNE-202ENST00000572438 TNXBP22105 4242 aa11.58□□□□□ -0.56
CHRNE-202ENST00000572438 LINC00313P59037 77 aa11.58□□□□□ -0.56
CHRNE-202ENST00000572438 CYSTM1Q9H1C7 97 aa11.56□□□□□ -0.56
CHRNE-202ENST00000572438 KLKP1Q107X0 134 aa11.56□□□□□ -0.56
CHRNE-202ENST00000572438 C5orf47Q569G3 176 aa11.55□□□□□ -0.56
CHRNE-202ENST00000572438 SNURFQ9Y675 71 aa11.53□□□□□ -0.56
CHRNE-202ENST00000572438 TP53AIP1Q9HCN2 124 aa11.53□□□□□ -0.56
CHRNE-202ENST00000572438 A0A0U1RQV1 116 aa11.52□□□□□ -0.57
CHRNE-202ENST00000572438 NDUFS5O43920 106 aa11.51□□□□□ -0.57
CHRNE-202ENST00000572438 ABCA13Q86UQ4 5058 aa11.51□□□□□ -0.57
CHRNE-202ENST00000572438 FLG2Q5D862 2391 aaPredicted RBP11.48□□□□□ -0.57
CHRNE-202ENST00000572438 MP68P56378 58 aa11.47□□□□□ -0.57
CHRNE-202ENST00000572438 KRTAP16-1A8MUX0 517 aa11.46□□□□□ -0.57
CHRNE-202ENST00000572438 H0Y9P7 68 aa11.45□□□□□ -0.58
CHRNE-202ENST00000572438 RETNLBQ9BQ08 111 aa11.45□□□□□ -0.58
CHRNE-202ENST00000572438 TRAV22A0A0B4J277 110 aa11.44□□□□□ -0.58
CHRNE-202ENST00000572438 MT1HL1P0DM35 61 aa11.44□□□□□ -0.58
CHRNE-202ENST00000572438 MYCBP2O75592 4640 aa11.44□□□□□ -0.58
CHRNE-202ENST00000572438 Q8N9P0 234 aaPredicted RBP11.44□□□□□ -0.58
CHRNE-202ENST00000572438 ZCCHC13Q8WW36 166 aaKnown RBP11.42□□□□□ -0.58
CHRNE-202ENST00000572438 NDUFC1O43677 76 aa11.42□□□□□ -0.58
CHRNE-202ENST00000572438 PCLOQ9Y6V0 5065 aa11.41□□□□□ -0.58
CHRNE-202ENST00000572438 H7BZZ5 65 aa11.41□□□□□ -0.58
CHRNE-202ENST00000572438 H3BPC8 53 aa11.4□□□□□ -0.58
CHRNE-202ENST00000572438 OXTP01178 125 aa11.39□□□□□ -0.59
CHRNE-202ENST00000572438 LINC00208Q96KT6 92 aa11.39□□□□□ -0.59
CHRNE-202ENST00000572438 TMEM258P61165 79 aa11.37□□□□□ -0.59
CHRNE-202ENST00000572438 C1orf64Q8NEQ6 169 aa11.35□□□□□ -0.59
CHRNE-202ENST00000572438 Q5W150 140 aa11.33□□□□□ -0.6
CHRNE-202ENST00000572438 KRTAP13-3Q3SY46 172 aa11.32□□□□□ -0.6
CHRNE-202ENST00000572438 C9orf92A6NGG3 77 aa11.31□□□□□ -0.6
CHRNE-202ENST00000572438 FP248Q71RG6 208 aaPredicted RBP11.31□□□□□ -0.6
CHRNE-202ENST00000572438 DMBT1Q9UGM3 2413 aaPredicted RBP11.3□□□□□ -0.6
CHRNE-202ENST00000572438 FAM236DA0A1B0GTK5 79 aa11.25□□□□□ -0.61
CHRNE-202ENST00000572438 FAM236CP0DP71 79 aa11.25□□□□□ -0.61
CHRNE-202ENST00000572438 LOC101927531A0A1B0GV80 90 aa11.22□□□□□ -0.61
CHRNE-202ENST00000572438 C20orf166-AS1Q96NR2 134 aa11.22□□□□□ -0.61
CHRNE-202ENST00000572438 A8MUU9 505 aa11.21□□□□□ -0.62
CHRNE-202ENST00000572438 IGLV7-46A0A075B6I9 117 aa11.2□□□□□ -0.62
CHRNE-202ENST00000572438 ATP5EP56381 51 aaPredicted RBP11.18□□□□□ -0.62
CHRNE-202ENST00000572438 PCOTHQ58A44 107 aa11.14□□□□□ -0.63
CHRNE-202ENST00000572438 CYP4F30PQ9H0H9 118 aa11.14□□□□□ -0.63
CHRNE-202ENST00000572438 IGKV2-30P06310 120 aa11.12□□□□□ -0.63
CHRNE-202ENST00000572438 J3QL48 77 aa11.11□□□□□ -0.63
CHRNE-202ENST00000572438 Q75L30 129 aa11.11□□□□□ -0.63
CHRNE-202ENST00000572438 SPANXA2-OT1Q8N9U9 137 aa11.11□□□□□ -0.63
CHRNE-202ENST00000572438 PRR4Q16378 134 aa11.1□□□□□ -0.63
CHRNE-202ENST00000572438 IGKV2D-30A0A075B6S6 120 aa11.05□□□□□ -0.64
CHRNE-202ENST00000572438 RPS28P62857 69 aaKnown RBP11.03□□□□□ -0.64
CHRNE-202ENST00000572438 XP32Q5T750 250 aa11.03□□□□□ -0.64
CHRNE-202ENST00000572438 SERP1Q9Y6X1 66 aa11.02□□□□□ -0.64
CHRNE-202ENST00000572438 RPL37P61927 97 aaKnown RBP10.98□□□□□ -0.65
CHRNE-202ENST00000572438 C7orf65Q6ZTY9 151 aa10.98□□□□□ -0.65
CHRNE-202ENST00000572438 TPRXLQ17RH7 258 aa10.98□□□□□ -0.65
CHRNE-202ENST00000572438 HRES1P13985 223 aa10.97□□□□□ -0.65
CHRNE-202ENST00000572438 ATP11AUNQ6ZP68 121 aa10.95□□□□□ -0.66
CHRNE-202ENST00000572438 HERC1Q15751 4861 aa10.92□□□□□ -0.66
CHRNE-202ENST00000572438 SPINK7P58062 85 aa10.86□□□□□ -0.67
CHRNE-202ENST00000572438 DMAC1Q96GE9 116 aa10.81□□□□□ -0.68
CHRNE-202ENST00000572438 COA5Q86WW8 74 aa10.79□□□□□ -0.68
CHRNE-202ENST00000572438 LPAP08519 4548 aa10.78□□□□□ -0.68
CHRNE-202ENST00000572438 ACYP2P14621 99 aa10.76□□□□□ -0.69
CHRNE-202ENST00000572438 LRP2P98164 4655 aa10.76□□□□□ -0.69
CHRNE-202ENST00000572438 SMIM26A0A096LP01 95 aa10.74□□□□□ -0.69
CHRNE-202ENST00000572438 C4orf26Q17RF5 130 aa10.74□□□□□ -0.69
CHRNE-202ENST00000572438 HMCN2Q8NDA2 5059 aa10.67□□□□□ -0.7
CHRNE-202ENST00000572438 A8MUN3 132 aa10.67□□□□□ -0.7
CHRNE-202ENST00000572438 COX6B2Q6YFQ2 88 aa10.61□□□□□ -0.71
CHRNE-202ENST00000572438 KRTAP3-1Q9BYR8 98 aa10.61□□□□□ -0.71
CHRNE-202ENST00000572438 SEC61BP60468 96 aaKnown RBP10.6□□□□□ -0.71
CHRNE-202ENST00000572438 CHKB-CPT1BH3BT56 60 aa10.59□□□□□ -0.71
CHRNE-202ENST00000572438 MPLKIPQ8TAP9 179 aa10.56□□□□□ -0.72
CHRNE-202ENST00000572438 Q1T7F1 81 aa10.52□□□□□ -0.73
CHRNE-202ENST00000572438 MUC17Q685J3 4493 aa10.47□□□□□ -0.73
CHRNE-202ENST00000572438 V9GYY9 64 aa10.47□□□□□ -0.73
CHRNE-202ENST00000572438 RBM12B-AS1Q9P1G2 102 aa10.39□□□□□ -0.75
CHRNE-202ENST00000572438 LINC01558Q9Y6Z2 57 aa10.38□□□□□ -0.75
CHRNE-202ENST00000572438 KRTAP4-1Q9BYQ7 146 aa10.37□□□□□ -0.75
CHRNE-202ENST00000572438 SPTSSBQ8NFR3 76 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms