RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 Q96NJ1 140 aa5.26□□□□□ -1.57
NPLOC4-208ENST00000572351 LINC00472Q9H8W2 130 aa5.26□□□□□ -1.57
NPLOC4-208ENST00000572351 C9orf92A6NGG3 77 aa5.25□□□□□ -1.57
NPLOC4-208ENST00000572351 J3KT08 172 aa5.25□□□□□ -1.57
NPLOC4-208ENST00000572351 KRTAP13-3Q3SY46 172 aa5.24□□□□□ -1.57
NPLOC4-208ENST00000572351 KRTAP9-6A0A140TA67 174 aa5.23□□□□□ -1.57
NPLOC4-208ENST00000572351 UBL5Q9BZL1 73 aa5.23□□□□□ -1.57
NPLOC4-208ENST00000572351 NDUFB1O75438 58 aa5.22□□□□□ -1.57
NPLOC4-208ENST00000572351 Q6ZVQ6 151 aa5.22□□□□□ -1.57
NPLOC4-208ENST00000572351 LINC00846Q9NV44 126 aa5.22□□□□□ -1.57
NPLOC4-208ENST00000572351 BPY2O14599 106 aa5.21□□□□□ -1.58
NPLOC4-208ENST00000572351 IGHV6-1A0A0B4J1U7 121 aa5.2□□□□□ -1.58
NPLOC4-208ENST00000572351 ACYP1P07311 99 aa5.2□□□□□ -1.58
NPLOC4-208ENST00000572351 A8MWP4 228 aa5.19□□□□□ -1.58
NPLOC4-208ENST00000572351 J3QR89 54 aa5.19□□□□□ -1.58
NPLOC4-208ENST00000572351 KRTAP19-1Q8IUB9 90 aa5.19□□□□□ -1.58
NPLOC4-208ENST00000572351 LPAP08519 4548 aa5.18□□□□□ -1.58
NPLOC4-208ENST00000572351 FAM240AA0A1B0GVK7 77 aa5.18□□□□□ -1.58
NPLOC4-208ENST00000572351 A0A1B0GVX0 72 aa5.18□□□□□ -1.58
NPLOC4-208ENST00000572351 DSCR10P59022 87 aa5.18□□□□□ -1.58
NPLOC4-208ENST00000572351 KRTAP4-12Q9BQ66 201 aa5.18□□□□□ -1.58
NPLOC4-208ENST00000572351 LINC00313P59037 77 aa5.17□□□□□ -1.58
NPLOC4-208ENST00000572351 C8orf87E5RJ46 101 aa5.16□□□□□ -1.58
NPLOC4-208ENST00000572351 IGKV3D-7A0A0C4DH55 119 aa5.15□□□□□ -1.59
NPLOC4-208ENST00000572351 PRR15Q8IV56 129 aa5.15□□□□□ -1.59
NPLOC4-208ENST00000572351 LCE3BQ5TA77 95 aa5.14□□□□□ -1.59
NPLOC4-208ENST00000572351 K7EQZ3 153 aa5.13□□□□□ -1.59
NPLOC4-208ENST00000572351 SEC61BP60468 96 aaKnown RBP5.13□□□□□ -1.59
NPLOC4-208ENST00000572351 NOTCH2NLQ7Z3S9 236 aa5.13□□□□□ -1.59
NPLOC4-208ENST00000572351 LRP2P98164 4655 aa5.13□□□□□ -1.59
NPLOC4-208ENST00000572351 CXCL6P80162 114 aa5.12□□□□□ -1.59
NPLOC4-208ENST00000572351 Q8N9L7 120 aa5.12□□□□□ -1.59
NPLOC4-208ENST00000572351 C8orf17Q9NRJ1 99 aa5.12□□□□□ -1.59
NPLOC4-208ENST00000572351 RPL37P61927 97 aaKnown RBP5.11□□□□□ -1.59
NPLOC4-208ENST00000572351 ATP5EP2Q5VTU8 51 aa5.11□□□□□ -1.59
NPLOC4-208ENST00000572351 K7ERU9 68 aa5.1□□□□□ -1.59
NPLOC4-208ENST00000572351 Q75L30 129 aa5.1□□□□□ -1.59
NPLOC4-208ENST00000572351 UBR4Q5T4S7 5183 aa5.1□□□□□ -1.59
NPLOC4-208ENST00000572351 ATP11AUNQ6ZP68 121 aa5.09□□□□□ -1.59
NPLOC4-208ENST00000572351 LINC00643Q86TS7 51 aa5.09□□□□□ -1.59
NPLOC4-208ENST00000572351 C20orf166-AS1Q96NR2 134 aa5.09□□□□□ -1.59
NPLOC4-208ENST00000572351 MMP24-AS1A0A0U1RRL7 71 aa5.08□□□□□ -1.6
NPLOC4-208ENST00000572351 hDV103S1A0JD37 113 aa5.08□□□□□ -1.6
NPLOC4-208ENST00000572351 KRTAP16-1A8MUX0 517 aa5.08□□□□□ -1.6
NPLOC4-208ENST00000572351 PCOTHQ58A44 107 aa5.08□□□□□ -1.6
NPLOC4-208ENST00000572351 A8MUU9 505 aa5.07□□□□□ -1.6
NPLOC4-208ENST00000572351 WFDC13Q8IUB5 93 aa5.07□□□□□ -1.6
NPLOC4-208ENST00000572351 TMEM254Q8TBM7 123 aa5.07□□□□□ -1.6
NPLOC4-208ENST00000572351 MUC17Q685J3 4493 aa5.06□□□□□ -1.6
NPLOC4-208ENST00000572351 HCG22E2RYF7 251 aa5.06□□□□□ -1.6
NPLOC4-208ENST00000572351 NDUFS5O43920 106 aa5.06□□□□□ -1.6
NPLOC4-208ENST00000572351 HIST1H4AP62805 103 aaKnown RBP5.06□□□□□ -1.6
NPLOC4-208ENST00000572351 CASC2Q6XLA1 102 aa5.06□□□□□ -1.6
NPLOC4-208ENST00000572351 MRPL34Q9BQ48 92 aaKnown RBP5.06□□□□□ -1.6
NPLOC4-208ENST00000572351 KRTAP19-4Q3LI73 84 aa5.05□□□□□ -1.6
NPLOC4-208ENST00000572351 Q8N9P0 234 aaPredicted RBP5.03□□□□□ -1.6
NPLOC4-208ENST00000572351 KRTAP4-8A0A0G2JLE6 195 aa5□□□□□ -1.61
NPLOC4-208ENST00000572351 ZCCHC13Q8WW36 166 aaKnown RBP5□□□□□ -1.61
NPLOC4-208ENST00000572351 KRTAP9-9Q9BYP9 154 aa4.99□□□□□ -1.61
NPLOC4-208ENST00000572351 KRTAP9-4Q9BYQ2 154 aa4.99□□□□□ -1.61
NPLOC4-208ENST00000572351 RNF213Q63HN8 5207 aa4.98□□□□□ -1.61
NPLOC4-208ENST00000572351 A0A087WVE0 104 aa4.98□□□□□ -1.61
NPLOC4-208ENST00000572351 KRTAP4-1Q9BYQ7 146 aa4.95□□□□□ -1.62
NPLOC4-208ENST00000572351 TP53AIP1Q9HCN2 124 aa4.95□□□□□ -1.62
NPLOC4-208ENST00000572351 A0A0U1RQV1 116 aa4.94□□□□□ -1.62
NPLOC4-208ENST00000572351 MT-ATP8P03928 68 aa4.94□□□□□ -1.62
NPLOC4-208ENST00000572351 IMUPQ9GZP8 106 aa4.93□□□□□ -1.62
NPLOC4-208ENST00000572351 MUC2Q02817 5179 aa4.92□□□□□ -1.62
NPLOC4-208ENST00000572351 LCE4AQ5TA78 99 aa4.92□□□□□ -1.62
NPLOC4-208ENST00000572351 SCGB1A1P11684 91 aa4.91□□□□□ -1.62
NPLOC4-208ENST00000572351 Q5W150 140 aa4.91□□□□□ -1.62
NPLOC4-208ENST00000572351 SPINK7P58062 85 aa4.9□□□□□ -1.63
NPLOC4-208ENST00000572351 IGKV2D-30A0A075B6S6 120 aa4.89□□□□□ -1.63
NPLOC4-208ENST00000572351 IGKV2-30P06310 120 aa4.89□□□□□ -1.63
NPLOC4-208ENST00000572351 UQCRQO14949 82 aa4.88□□□□□ -1.63
NPLOC4-208ENST00000572351 KRTAP9-7A8MTY7 169 aa4.87□□□□□ -1.63
NPLOC4-208ENST00000572351 COX6B2Q6YFQ2 88 aa4.87□□□□□ -1.63
NPLOC4-208ENST00000572351 C7orf65Q6ZTY9 151 aa4.87□□□□□ -1.63
NPLOC4-208ENST00000572351 TRAV22A0A0B4J277 110 aa4.86□□□□□ -1.63
NPLOC4-208ENST00000572351 KRTAP4-7Q9BYR0 210 aa4.86□□□□□ -1.63
NPLOC4-208ENST00000572351 FAM236DA0A1B0GTK5 79 aa4.85□□□□□ -1.63
NPLOC4-208ENST00000572351 FAM236AA0A1B0GUQ0 79 aa4.85□□□□□ -1.63
NPLOC4-208ENST00000572351 FAM236BA0A1B0GV22 79 aa4.85□□□□□ -1.63
NPLOC4-208ENST00000572351 FAM236CP0DP71 79 aa4.85□□□□□ -1.63
NPLOC4-208ENST00000572351 RBM12B-AS1Q9P1G2 102 aa4.85□□□□□ -1.63
NPLOC4-208ENST00000572351 H0Y9P7 68 aa4.84□□□□□ -1.63
NPLOC4-208ENST00000572351 ATOX1O00244 68 aa4.84□□□□□ -1.63
NPLOC4-208ENST00000572351 MP68P56378 58 aa4.84□□□□□ -1.63
NPLOC4-208ENST00000572351 KRTAP3-1Q9BYR8 98 aa4.84□□□□□ -1.63
NPLOC4-208ENST00000572351 OCR1Q9BZK8 76 aa4.84□□□□□ -1.63
NPLOC4-208ENST00000572351 HRES1P13985 223 aa4.83□□□□□ -1.64
NPLOC4-208ENST00000572351 LOC101927531A0A1B0GV80 90 aa4.81□□□□□ -1.64
NPLOC4-208ENST00000572351 SMIM20Q8N5G0 67 aa4.81□□□□□ -1.64
NPLOC4-208ENST00000572351 C5orf47Q569G3 176 aa4.8□□□□□ -1.64
NPLOC4-208ENST00000572351 LCE1DQ5T752 114 aa4.8□□□□□ -1.64
NPLOC4-208ENST00000572351 C1orf64Q8NEQ6 169 aa4.79□□□□□ -1.64
NPLOC4-208ENST00000572351 LINC00208Q96KT6 92 aa4.79□□□□□ -1.64
NPLOC4-208ENST00000572351 KRTAP19-2Q3LHN2 52 aa4.78□□□□□ -1.64
NPLOC4-208ENST00000572351 MPLKIPQ8TAP9 179 aa4.78□□□□□ -1.64
NPLOC4-208ENST00000572351 CYP4F30PQ9H0H9 118 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms