RNA–Protein interactions for RNA: ENST00000571346.1

PRPF8-202, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-202ENST00000571346 UBE2V1Q13404 147 aa6.99□□□□□ -1.29
PRPF8-202ENST00000571346 KRTAP16-1A8MUX0 517 aa6.97□□□□□ -1.29
PRPF8-202ENST00000571346 LINC00472Q9H8W2 130 aa6.97□□□□□ -1.29
PRPF8-202ENST00000571346 C9orf118A6NHY6 69 aa6.96□□□□□ -1.3
PRPF8-202ENST00000571346 NOTCH2NLQ7Z3S9 236 aa6.96□□□□□ -1.3
PRPF8-202ENST00000571346 DSCR8Q96T75 97 aa6.96□□□□□ -1.3
PRPF8-202ENST00000571346 FAM236DA0A1B0GTK5 79 aa6.95□□□□□ -1.3
PRPF8-202ENST00000571346 FAM236CP0DP71 79 aa6.95□□□□□ -1.3
PRPF8-202ENST00000571346 RBM3P98179 157 aaKnown RBP6.95□□□□□ -1.3
PRPF8-202ENST00000571346 NAA38Q9BRA0 125 aaKnown RBP6.93□□□□□ -1.3
PRPF8-202ENST00000571346 A0A1B0GVX0 72 aa6.92□□□□□ -1.3
PRPF8-202ENST00000571346 A0A1W2PPM0 123 aa6.91□□□□□ -1.3
PRPF8-202ENST00000571346 C9JAW5 83 aa6.9□□□□□ -1.3
PRPF8-202ENST00000571346 BAALC-AS2P0C853 105 aa6.9□□□□□ -1.3
PRPF8-202ENST00000571346 GTF2H5Q6ZYL4 71 aa6.9□□□□□ -1.3
PRPF8-202ENST00000571346 C8orf87E5RJ46 101 aa6.89□□□□□ -1.31
PRPF8-202ENST00000571346 LYRM7Q5U5X0 104 aa6.89□□□□□ -1.31
PRPF8-202ENST00000571346 ATXN8Q156A1 80 aa6.88□□□□□ -1.31
PRPF8-202ENST00000571346 RBM12B-AS1Q9P1G2 102 aa6.88□□□□□ -1.31
PRPF8-202ENST00000571346 SPCS1Q9Y6A9 102 aa6.88□□□□□ -1.31
PRPF8-202ENST00000571346 USH2AO75445 5202 aa6.86□□□□□ -1.31
PRPF8-202ENST00000571346 J3KT08 172 aa6.86□□□□□ -1.31
PRPF8-202ENST00000571346 K7EP34 96 aa6.86□□□□□ -1.31
PRPF8-202ENST00000571346 HRES1P13985 223 aa6.86□□□□□ -1.31
PRPF8-202ENST00000571346 Q6ZQT0 140 aa6.84□□□□□ -1.31
PRPF8-202ENST00000571346 NDUFB1O75438 58 aa6.83□□□□□ -1.32
PRPF8-202ENST00000571346 KRTAP9-8Q9BYQ0 159 aa6.83□□□□□ -1.32
PRPF8-202ENST00000571346 JMJD7-PLA2G4BH0Y9G9 81 aa6.82□□□□□ -1.32
PRPF8-202ENST00000571346 MPLKIPQ8TAP9 179 aa6.82□□□□□ -1.32
PRPF8-202ENST00000571346 ZCCHC13Q8WW36 166 aaKnown RBP6.82□□□□□ -1.32
PRPF8-202ENST00000571346 C14orf132Q9NPU4 83 aa6.81□□□□□ -1.32
PRPF8-202ENST00000571346 LOC110117498A0A087WWA1 95 aa6.8□□□□□ -1.32
PRPF8-202ENST00000571346 SSPOA2VEC9 5147 aa6.79□□□□□ -1.32
PRPF8-202ENST00000571346 A8MWP4 228 aa6.78□□□□□ -1.32
PRPF8-202ENST00000571346 MT2AP02795 61 aa6.77□□□□□ -1.33
PRPF8-202ENST00000571346 MTURNQ8N3F0 131 aa6.77□□□□□ -1.33
PRPF8-202ENST00000571346 C8orf17Q9NRJ1 99 aa6.77□□□□□ -1.33
PRPF8-202ENST00000571346 PDE6GP18545 87 aa6.76□□□□□ -1.33
PRPF8-202ENST00000571346 SPINK7P58062 85 aa6.76□□□□□ -1.33
PRPF8-202ENST00000571346 IGKV3D-7A0A0C4DH55 119 aa6.75□□□□□ -1.33
PRPF8-202ENST00000571346 A0A1B0GW54 56 aa6.75□□□□□ -1.33
PRPF8-202ENST00000571346 F8W1H4 67 aa6.74□□□□□ -1.33
PRPF8-202ENST00000571346 Q8N9P0 234 aaPredicted RBP6.74□□□□□ -1.33
PRPF8-202ENST00000571346 Q6ZVQ6 151 aa6.73□□□□□ -1.33
PRPF8-202ENST00000571346 MT1FP04733 61 aa6.72□□□□□ -1.33
PRPF8-202ENST00000571346 NREPQ16612 68 aa6.72□□□□□ -1.33
PRPF8-202ENST00000571346 WFDC13Q8IUB5 93 aa6.72□□□□□ -1.33
PRPF8-202ENST00000571346 PRR15Q8IV56 129 aa6.7□□□□□ -1.34
PRPF8-202ENST00000571346 KRTAP10-10P60014 251 aa6.69□□□□□ -1.34
PRPF8-202ENST00000571346 PRO0461Q9UI25 63 aa6.69□□□□□ -1.34
PRPF8-202ENST00000571346 MMP24-AS1A0A0U1RRL7 71 aa6.67□□□□□ -1.34
PRPF8-202ENST00000571346 H3BT86 120 aa6.66□□□□□ -1.34
PRPF8-202ENST00000571346 K7EQZ3 153 aa6.66□□□□□ -1.34
PRPF8-202ENST00000571346 TMEM254Q8TBM7 123 aa6.66□□□□□ -1.34
PRPF8-202ENST00000571346 MRPL34Q9BQ48 92 aaKnown RBP6.66□□□□□ -1.34
PRPF8-202ENST00000571346 NDUFS5O43920 106 aa6.65□□□□□ -1.34
PRPF8-202ENST00000571346 SMCPP49901 116 aaPredicted RBP6.65□□□□□ -1.34
PRPF8-202ENST00000571346 ETDBQ3ZM63 59 aa6.65□□□□□ -1.34
PRPF8-202ENST00000571346 hDV103S1A0JD37 113 aa6.63□□□□□ -1.35
PRPF8-202ENST00000571346 K7ERU9 68 aa6.63□□□□□ -1.35
PRPF8-202ENST00000571346 FCGBPQ9Y6R7 5405 aaPredicted RBP6.63□□□□□ -1.35
PRPF8-202ENST00000571346 J3QR89 54 aa6.62□□□□□ -1.35
PRPF8-202ENST00000571346 BPY2O14599 106 aa6.61□□□□□ -1.35
PRPF8-202ENST00000571346 LCE2BO14633 110 aa6.61□□□□□ -1.35
PRPF8-202ENST00000571346 KRTAP9-3Q9BYQ3 159 aa6.61□□□□□ -1.35
PRPF8-202ENST00000571346 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.59□□□□□ -1.35
PRPF8-202ENST00000571346 IGKV2D-30A0A075B6S6 120 aa6.57□□□□□ -1.36
PRPF8-202ENST00000571346 IGKV2-30P06310 120 aa6.57□□□□□ -1.36
PRPF8-202ENST00000571346 Q8N9L7 120 aa6.56□□□□□ -1.36
PRPF8-202ENST00000571346 KRTAP19-1Q8IUB9 90 aa6.55□□□□□ -1.36
PRPF8-202ENST00000571346 C7orf65Q6ZTY9 151 aa6.54□□□□□ -1.36
PRPF8-202ENST00000571346 KRTAP9-7A8MTY7 169 aa6.53□□□□□ -1.36
PRPF8-202ENST00000571346 CASC2Q6XLA1 102 aa6.53□□□□□ -1.36
PRPF8-202ENST00000571346 H1FX-AS1Q4G0G2 97 aa6.52□□□□□ -1.37
PRPF8-202ENST00000571346 HCG22E2RYF7 251 aa6.51□□□□□ -1.37
PRPF8-202ENST00000571346 Q5W150 140 aa6.5□□□□□ -1.37
PRPF8-202ENST00000571346 CXCL6P80162 114 aa6.45□□□□□ -1.38
PRPF8-202ENST00000571346 UBL5Q9BZL1 73 aa6.45□□□□□ -1.38
PRPF8-202ENST00000571346 FAM240AA0A1B0GVK7 77 aa6.44□□□□□ -1.38
PRPF8-202ENST00000571346 ACYP1P07311 99 aa6.44□□□□□ -1.38
PRPF8-202ENST00000571346 LINC00846Q9NV44 126 aa6.44□□□□□ -1.38
PRPF8-202ENST00000571346 C4orf26Q17RF5 130 aa6.43□□□□□ -1.38
PRPF8-202ENST00000571346 MACF1Q9UPN3 7388 aaKnown RBP6.42□□□□□ -1.38
PRPF8-202ENST00000571346 SYNE2Q8WXH0 6885 aaKnown RBP6.4□□□□□ -1.38
PRPF8-202ENST00000571346 KRTAP19-6Q3LI70 58 aa6.39□□□□□ -1.39
PRPF8-202ENST00000571346 C5orf47Q569G3 176 aa6.35□□□□□ -1.39
PRPF8-202ENST00000571346 FAM236AA0A1B0GUQ0 79 aa6.33□□□□□ -1.4
PRPF8-202ENST00000571346 FAM236BA0A1B0GV22 79 aa6.33□□□□□ -1.4
PRPF8-202ENST00000571346 LINC00643Q86TS7 51 aa6.33□□□□□ -1.4
PRPF8-202ENST00000571346 S4R3F8 94 aa6.33□□□□□ -1.4
PRPF8-202ENST00000571346 MT-ATP8P03928 68 aa6.32□□□□□ -1.4
PRPF8-202ENST00000571346 C1orf64Q8NEQ6 169 aa6.29□□□□□ -1.4
PRPF8-202ENST00000571346 TP53AIP1Q9HCN2 124 aa6.29□□□□□ -1.4
PRPF8-202ENST00000571346 KRTAP3-1Q9BYR8 98 aa6.28□□□□□ -1.4
PRPF8-202ENST00000571346 ATP5EP2Q5VTU8 51 aa6.26□□□□□ -1.41
PRPF8-202ENST00000571346 LCA10Q71F78 164 aa6.26□□□□□ -1.41
PRPF8-202ENST00000571346 SCGB1A1P11684 91 aa6.25□□□□□ -1.41
PRPF8-202ENST00000571346 CSAG1Q6PB30 78 aa6.24□□□□□ -1.41
PRPF8-202ENST00000571346 IMUPQ9GZP8 106 aa6.23□□□□□ -1.41
PRPF8-202ENST00000571346 HIST1H4AP62805 103 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms