RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 LINC00313P59037 77 aa12.87□□□□□ -0.35
RAB40C-212ENST00000569575 CXCL6P80162 114 aa12.85□□□□□ -0.35
RAB40C-212ENST00000569575 PRR15Q8IV56 129 aa12.85□□□□□ -0.35
RAB40C-212ENST00000569575 C9orf92A6NGG3 77 aa12.84□□□□□ -0.35
RAB40C-212ENST00000569575 DSCR10P59022 87 aa12.84□□□□□ -0.35
RAB40C-212ENST00000569575 XP32Q5T750 250 aa12.84□□□□□ -0.35
RAB40C-212ENST00000569575 IGHV6-1A0A0B4J1U7 121 aa12.83□□□□□ -0.36
RAB40C-212ENST00000569575 HMCN2Q8NDA2 5059 aa12.82□□□□□ -0.36
RAB40C-212ENST00000569575 IGKV3D-7A0A0C4DH55 119 aa12.81□□□□□ -0.36
RAB40C-212ENST00000569575 K7ERU9 68 aa12.81□□□□□ -0.36
RAB40C-212ENST00000569575 ATP5EP2Q5VTU8 51 aa12.81□□□□□ -0.36
RAB40C-212ENST00000569575 LINC00643Q86TS7 51 aa12.77□□□□□ -0.37
RAB40C-212ENST00000569575 K7EQZ3 153 aa12.74□□□□□ -0.37
RAB40C-212ENST00000569575 C8orf17Q9NRJ1 99 aa12.74□□□□□ -0.37
RAB40C-212ENST00000569575 Q75L30 129 aa12.73□□□□□ -0.37
RAB40C-212ENST00000569575 SEC61BP60468 96 aaKnown RBP12.72□□□□□ -0.37
RAB40C-212ENST00000569575 C20orf166-AS1Q96NR2 134 aa12.71□□□□□ -0.37
RAB40C-212ENST00000569575 KRTAP16-1A8MUX0 517 aa12.69□□□□□ -0.38
RAB40C-212ENST00000569575 RPL37P61927 97 aaKnown RBP12.69□□□□□ -0.38
RAB40C-212ENST00000569575 NOTCH2NLQ7Z3S9 236 aa12.69□□□□□ -0.38
RAB40C-212ENST00000569575 A8MUU9 505 aa12.68□□□□□ -0.38
RAB40C-212ENST00000569575 TMEM254Q8TBM7 123 aa12.65□□□□□ -0.38
RAB40C-212ENST00000569575 LPAP08519 4548 aa12.64□□□□□ -0.39
RAB40C-212ENST00000569575 MMP24-AS1A0A0U1RRL7 71 aa12.64□□□□□ -0.39
RAB40C-212ENST00000569575 hDV103S1A0JD37 113 aa12.63□□□□□ -0.39
RAB40C-212ENST00000569575 Q8N9L7 120 aa12.62□□□□□ -0.39
RAB40C-212ENST00000569575 Q8N9P0 234 aaPredicted RBP12.62□□□□□ -0.39
RAB40C-212ENST00000569575 LRP2P98164 4655 aa12.61□□□□□ -0.39
RAB40C-212ENST00000569575 ATP11AUNQ6ZP68 121 aa12.6□□□□□ -0.39
RAB40C-212ENST00000569575 MRPL34Q9BQ48 92 aaKnown RBP12.6□□□□□ -0.39
RAB40C-212ENST00000569575 HCG22E2RYF7 251 aa12.58□□□□□ -0.4
RAB40C-212ENST00000569575 CASC2Q6XLA1 102 aa12.58□□□□□ -0.4
RAB40C-212ENST00000569575 HIST1H4AP62805 103 aaKnown RBP12.51□□□□□ -0.41
RAB40C-212ENST00000569575 PCOTHQ58A44 107 aa12.5□□□□□ -0.41
RAB40C-212ENST00000569575 WFDC13Q8IUB5 93 aa12.5□□□□□ -0.41
RAB40C-212ENST00000569575 IMUPQ9GZP8 106 aa12.48□□□□□ -0.41
RAB40C-212ENST00000569575 NDUFS5O43920 106 aa12.43□□□□□ -0.42
RAB40C-212ENST00000569575 ZCCHC13Q8WW36 166 aaKnown RBP12.42□□□□□ -0.42
RAB40C-212ENST00000569575 TP53AIP1Q9HCN2 124 aa12.42□□□□□ -0.42
RAB40C-212ENST00000569575 MUC17Q685J3 4493 aa12.34□□□□□ -0.43
RAB40C-212ENST00000569575 A0A087WVE0 104 aa12.32□□□□□ -0.44
RAB40C-212ENST00000569575 MT-ATP8P03928 68 aa12.31□□□□□ -0.44
RAB40C-212ENST00000569575 UBR4Q5T4S7 5183 aa12.28□□□□□ -0.44
RAB40C-212ENST00000569575 KRTAP4-1Q9BYQ7 146 aa12.23□□□□□ -0.45
RAB40C-212ENST00000569575 A0A0U1RQV1 116 aa12.22□□□□□ -0.45
RAB40C-212ENST00000569575 UQCRQO14949 82 aa12.22□□□□□ -0.45
RAB40C-212ENST00000569575 SCGB1A1P11684 91 aa12.19□□□□□ -0.46
RAB40C-212ENST00000569575 Q5W150 140 aa12.19□□□□□ -0.46
RAB40C-212ENST00000569575 SPINK7P58062 85 aa12.16□□□□□ -0.46
RAB40C-212ENST00000569575 TRAV22A0A0B4J277 110 aa12.14□□□□□ -0.47
RAB40C-212ENST00000569575 SMIM20Q8N5G0 67 aa12.13□□□□□ -0.47
RAB40C-212ENST00000569575 OCR1Q9BZK8 76 aa12.13□□□□□ -0.47
RAB40C-212ENST00000569575 ATOX1O00244 68 aa12.12□□□□□ -0.47
RAB40C-212ENST00000569575 C7orf65Q6ZTY9 151 aa12.11□□□□□ -0.47
RAB40C-212ENST00000569575 FAM236AA0A1B0GUQ0 79 aa12.08□□□□□ -0.48
RAB40C-212ENST00000569575 FAM236BA0A1B0GV22 79 aa12.08□□□□□ -0.48
RAB40C-212ENST00000569575 C5orf47Q569G3 176 aa12.07□□□□□ -0.48
RAB40C-212ENST00000569575 IGKV2-30P06310 120 aa12.04□□□□□ -0.48
RAB40C-212ENST00000569575 IGKV2D-30A0A075B6S6 120 aa12.03□□□□□ -0.48
RAB40C-212ENST00000569575 LOC101927531A0A1B0GV80 90 aa12.03□□□□□ -0.48
RAB40C-212ENST00000569575 RBM12B-AS1Q9P1G2 102 aa12.03□□□□□ -0.48
RAB40C-212ENST00000569575 RNF213Q63HN8 5207 aa12.02□□□□□ -0.48
RAB40C-212ENST00000569575 HRES1P13985 223 aa12.02□□□□□ -0.49
RAB40C-212ENST00000569575 MP68P56378 58 aa12.02□□□□□ -0.49
RAB40C-212ENST00000569575 H0Y9P7 68 aa12.01□□□□□ -0.49
RAB40C-212ENST00000569575 H3BPC8 53 aa12□□□□□ -0.49
RAB40C-212ENST00000569575 MPLKIPQ8TAP9 179 aa11.99□□□□□ -0.49
RAB40C-212ENST00000569575 MUC2Q02817 5179 aa11.98□□□□□ -0.49
RAB40C-212ENST00000569575 TRAV7A0A075B6U4 112 aa11.97□□□□□ -0.49
RAB40C-212ENST00000569575 CYP4F30PQ9H0H9 118 aa11.94□□□□□ -0.5
RAB40C-212ENST00000569575 COX6B2Q6YFQ2 88 aa11.93□□□□□ -0.5
RAB40C-212ENST00000569575 KRTAP19-2Q3LHN2 52 aa11.91□□□□□ -0.5
RAB40C-212ENST00000569575 C1orf64Q8NEQ6 169 aa11.91□□□□□ -0.5
RAB40C-212ENST00000569575 LINC00208Q96KT6 92 aa11.88□□□□□ -0.51
RAB40C-212ENST00000569575 FAM236DA0A1B0GTK5 79 aa11.86□□□□□ -0.51
RAB40C-212ENST00000569575 FAM236CP0DP71 79 aa11.86□□□□□ -0.51
RAB40C-212ENST00000569575 LCE2CQ5TA81 110 aa11.84□□□□□ -0.51
RAB40C-212ENST00000569575 SERP2Q8N6R1 65 aa11.84□□□□□ -0.51
RAB40C-212ENST00000569575 C4orf26Q17RF5 130 aa11.74□□□□□ -0.53
RAB40C-212ENST00000569575 H1FX-AS1Q4G0G2 97 aa11.69□□□□□ -0.54
RAB40C-212ENST00000569575 LCE2AQ5TA79 106 aaPredicted RBP11.68□□□□□ -0.54
RAB40C-212ENST00000569575 COX7CP15954 63 aa11.66□□□□□ -0.54
RAB40C-212ENST00000569575 MT1HP80294 61 aa11.66□□□□□ -0.54
RAB40C-212ENST00000569575 FAT4Q6V0I7 4981 aa11.65□□□□□ -0.54
RAB40C-212ENST00000569575 KLKP1Q107X0 134 aa11.64□□□□□ -0.55
RAB40C-212ENST00000569575 A8MUN3 132 aa11.63□□□□□ -0.55
RAB40C-212ENST00000569575 C20orf197Q8N268 126 aa11.6□□□□□ -0.55
RAB40C-212ENST00000569575 ANAPC13Q9BS18 74 aa11.6□□□□□ -0.55
RAB40C-212ENST00000569575 KRTAP3-1Q9BYR8 98 aa11.57□□□□□ -0.56
RAB40C-212ENST00000569575 M0R2T5 61 aa11.55□□□□□ -0.56
RAB40C-212ENST00000569575 SNURFQ9Y675 71 aa11.54□□□□□ -0.56
RAB40C-212ENST00000569575 FLGP20930 4061 aaPredicted RBP11.51□□□□□ -0.57
RAB40C-212ENST00000569575 NDUFC1O43677 76 aa11.49□□□□□ -0.57
RAB40C-212ENST00000569575 SPANXA2-OT1Q8N9U9 137 aa11.46□□□□□ -0.57
RAB40C-212ENST00000569575 DMAC1Q96GE9 116 aa11.44□□□□□ -0.58
RAB40C-212ENST00000569575 S4R3F8 94 aa11.42□□□□□ -0.58
RAB40C-212ENST00000569575 ACYP2P14621 99 aa11.35□□□□□ -0.59
RAB40C-212ENST00000569575 KRTAP10-6P60371 365 aaPredicted RBP11.35□□□□□ -0.59
RAB40C-212ENST00000569575 LORP23490 312 aaPredicted RBP11.32□□□□□ -0.6
RAB40C-212ENST00000569575 CSAG1Q6PB30 78 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms