RNA–Protein interactions for RNA: ENST00000569476.2

LINC00559-201, long intergenic non-protein coding RNA 559, humanhuman

TSL 1 (best) BASIC

Gene LINC00559, Length 3,867 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00559-201ENST00000569476 KRTAP1-4P0C5Y4 121 aa4.57□□□□□ -1.68
LINC00559-201ENST00000569476 LYSTQ99698 3801 aa4.57□□□□□ -1.68
LINC00559-201ENST00000569476 STAB2Q8WWQ8 2551 aa4.56□□□□□ -1.68
LINC00559-201ENST00000569476 LINC00313P59037 77 aa4.56□□□□□ -1.68
LINC00559-201ENST00000569476 KRTAP13-2Q52LG2 175 aa4.56□□□□□ -1.68
LINC00559-201ENST00000569476 DNAH11Q96DT5 4516 aa4.56□□□□□ -1.68
LINC00559-201ENST00000569476 CSMD3Q7Z407 3707 aa4.56□□□□□ -1.68
LINC00559-201ENST00000569476 COL7A1Q02388 2944 aa4.56□□□□□ -1.68
LINC00559-201ENST00000569476 MGAM2Q2M2H8 2515 aa4.56□□□□□ -1.68
LINC00559-201ENST00000569476 FRAS1Q86XX4 4008 aa4.55□□□□□ -1.68
LINC00559-201ENST00000569476 NDUFS5O43920 106 aa4.54□□□□□ -1.68
LINC00559-201ENST00000569476 C4orf48Q5BLP8 95 aa4.54□□□□□ -1.68
LINC00559-201ENST00000569476 ANAPC11Q9NYG5 84 aa4.53□□□□□ -1.68
LINC00559-201ENST00000569476 SACSQ9NZJ4 4579 aa4.53□□□□□ -1.68
LINC00559-201ENST00000569476 COA5Q86WW8 74 aa4.53□□□□□ -1.68
LINC00559-201ENST00000569476 PRR26Q8N8Z3 221 aa4.53□□□□□ -1.68
LINC00559-201ENST00000569476 KRTAP16-1A8MUX0 517 aa4.52□□□□□ -1.69
LINC00559-201ENST00000569476 A0A087X002 238 aa4.51□□□□□ -1.69
LINC00559-201ENST00000569476 A0A1B0GVY2 172 aa4.51□□□□□ -1.69
LINC00559-201ENST00000569476 TYMSOSQ8TAI1 123 aa4.51□□□□□ -1.69
LINC00559-201ENST00000569476 DNAH5Q8TE73 4624 aa4.51□□□□□ -1.69
LINC00559-201ENST00000569476 IGKV2-30P06310 120 aa4.5□□□□□ -1.69
LINC00559-201ENST00000569476 LINC01558Q9Y6Z2 57 aa4.5□□□□□ -1.69
LINC00559-201ENST00000569476 ACYP2P14621 99 aa4.5□□□□□ -1.69
LINC00559-201ENST00000569476 DMAC1Q96GE9 116 aa4.49□□□□□ -1.69
LINC00559-201ENST00000569476 Q75L30 129 aa4.49□□□□□ -1.69
LINC00559-201ENST00000569476 NOTCH2NLQ7Z3S9 236 aa4.49□□□□□ -1.69
LINC00559-201ENST00000569476 MPLKIPQ8TAP9 179 aa4.48□□□□□ -1.69
LINC00559-201ENST00000569476 PLA2G1BP04054 148 aaKnown RBP4.48□□□□□ -1.69
LINC00559-201ENST00000569476 Q5W150 140 aa4.48□□□□□ -1.69
LINC00559-201ENST00000569476 LINC00304Q8N9R0 145 aa4.48□□□□□ -1.69
LINC00559-201ENST00000569476 PKD1P98161 4303 aa4.47□□□□□ -1.69
LINC00559-201ENST00000569476 PKHD1L1Q86WI1 4243 aa4.47□□□□□ -1.69
LINC00559-201ENST00000569476 A8MUN3 132 aa4.46□□□□□ -1.7
LINC00559-201ENST00000569476 PCOTHQ58A44 107 aa4.46□□□□□ -1.7
LINC00559-201ENST00000569476 HRES1P13985 223 aa4.45□□□□□ -1.7
LINC00559-201ENST00000569476 PRR4Q16378 134 aa4.45□□□□□ -1.7
LINC00559-201ENST00000569476 FAT2Q9NYQ8 4349 aa4.44□□□□□ -1.7
LINC00559-201ENST00000569476 MEGF8Q7Z7M0 2845 aa4.44□□□□□ -1.7
LINC00559-201ENST00000569476 Q5VV11 94 aa4.44□□□□□ -1.7
LINC00559-201ENST00000569476 FBN3Q75N90 2809 aa4.42□□□□□ -1.7
LINC00559-201ENST00000569476 KRTAP10-4P60372 401 aaPredicted RBP4.42□□□□□ -1.7
LINC00559-201ENST00000569476 KMT2AQ03164 3969 aa4.42□□□□□ -1.7
LINC00559-201ENST00000569476 BRK1Q8WUW1 75 aa4.42□□□□□ -1.7
LINC00559-201ENST00000569476 PRR15LQ9BU68 103 aa4.42□□□□□ -1.7
LINC00559-201ENST00000569476 C20orf166-AS1Q96NR2 134 aa4.41□□□□□ -1.7
LINC00559-201ENST00000569476 IGKV2D-30A0A075B6S6 120 aa4.41□□□□□ -1.7
LINC00559-201ENST00000569476 A8MUU9 505 aa4.41□□□□□ -1.7
LINC00559-201ENST00000569476 C7orf65Q6ZTY9 151 aa4.4□□□□□ -1.71
LINC00559-201ENST00000569476 SPTSSBQ8NFR3 76 aa4.38□□□□□ -1.71
LINC00559-201ENST00000569476 CHKB-CPT1BH3BT56 60 aa4.38□□□□□ -1.71
LINC00559-201ENST00000569476 CDC42SE1Q9NRR8 79 aa4.38□□□□□ -1.71
LINC00559-201ENST00000569476 PSPHP1O15172 72 aa4.37□□□□□ -1.71
LINC00559-201ENST00000569476 TENM2Q9NT68 2774 aa4.36□□□□□ -1.71
LINC00559-201ENST00000569476 DYNC1H1Q14204 4646 aaKnown RBP4.36□□□□□ -1.71
LINC00559-201ENST00000569476 ATP11AUNQ6ZP68 121 aa4.36□□□□□ -1.71
LINC00559-201ENST00000569476 DNHD1Q96M86 4753 aa4.36□□□□□ -1.71
LINC00559-201ENST00000569476 PKHD1P08F94 4074 aa4.33□□□□□ -1.72
LINC00559-201ENST00000569476 APOBP04114 4563 aaKnown RBP4.33□□□□□ -1.72
LINC00559-201ENST00000569476 LRP1BQ9NZR2 4599 aa4.32□□□□□ -1.72
LINC00559-201ENST00000569476 A6NED7 52 aa4.31□□□□□ -1.72
LINC00559-201ENST00000569476 KRTAP10-8P60410 259 aa4.3□□□□□ -1.72
LINC00559-201ENST00000569476 A0A1B0GU69 56 aa4.28□□□□□ -1.72
LINC00559-201ENST00000569476 SRRM2Q9UQ35 2752 aaKnown RBP4.26□□□□□ -1.73
LINC00559-201ENST00000569476 VPS13BQ7Z7G8 4022 aa4.26□□□□□ -1.73
LINC00559-201ENST00000569476 SMR3BP02814 79 aaPredicted RBP4.26□□□□□ -1.73
LINC00559-201ENST00000569476 LCA10Q71F78 164 aa4.26□□□□□ -1.73
LINC00559-201ENST00000569476 SPATA8Q6RVD6 105 aa4.26□□□□□ -1.73
LINC00559-201ENST00000569476 RETNLBQ9BQ08 111 aa4.26□□□□□ -1.73
LINC00559-201ENST00000569476 HYDINQ4G0P3 5121 aa4.26□□□□□ -1.73
LINC00559-201ENST00000569476 J3QL48 77 aa4.25□□□□□ -1.73
LINC00559-201ENST00000569476 SEC61GP60059 68 aa4.24□□□□□ -1.73
LINC00559-201ENST00000569476 PMAIP1Q13794 54 aa4.24□□□□□ -1.73
LINC00559-201ENST00000569476 UQCR11O14957 56 aa4.23□□□□□ -1.73
LINC00559-201ENST00000569476 RYR2Q92736 4967 aa4.22□□□□□ -1.73
LINC00559-201ENST00000569476 A6NN06 94 aa4.22□□□□□ -1.73
LINC00559-201ENST00000569476 Q5VSD8 79 aa4.22□□□□□ -1.73
LINC00559-201ENST00000569476 COX6B2Q6YFQ2 88 aa4.22□□□□□ -1.73
LINC00559-201ENST00000569476 TGP01266 2768 aa4.22□□□□□ -1.73
LINC00559-201ENST00000569476 SPINK7P58062 85 aa4.21□□□□□ -1.73
LINC00559-201ENST00000569476 RPL37P61927 97 aaKnown RBP4.21□□□□□ -1.73
LINC00559-201ENST00000569476 KTN1-AS1Q86SY8 53 aa4.21□□□□□ -1.74
LINC00559-201ENST00000569476 TNXBP22105 4242 aa4.19□□□□□ -1.74
LINC00559-201ENST00000569476 C9orf92A6NGG3 77 aa4.19□□□□□ -1.74
LINC00559-201ENST00000569476 Q8N1X5 172 aa4.18□□□□□ -1.74
LINC00559-201ENST00000569476 MIR22HGQ0VDD5 57 aa4.18□□□□□ -1.74
LINC00559-201ENST00000569476 FAT1Q14517 4588 aa4.18□□□□□ -1.74
LINC00559-201ENST00000569476 HSPG2P98160 4391 aa4.17□□□□□ -1.74
LINC00559-201ENST00000569476 XP32Q5T750 250 aa4.15□□□□□ -1.75
LINC00559-201ENST00000569476 KRTAP3-1Q9BYR8 98 aa4.14□□□□□ -1.75
LINC00559-201ENST00000569476 TPRXLQ17RH7 258 aa4.12□□□□□ -1.75
LINC00559-201ENST00000569476 MT1HL1P0DM35 61 aa4.11□□□□□ -1.75
LINC00559-201ENST00000569476 FAT3Q8TDW7 4589 aa4.1□□□□□ -1.75
LINC00559-201ENST00000569476 A8MU10 97 aa4.1□□□□□ -1.75
LINC00559-201ENST00000569476 H1FX-AS1Q4G0G2 97 aa4.1□□□□□ -1.75
LINC00559-201ENST00000569476 A0A1B0GU33 70 aa4.07□□□□□ -1.76
LINC00559-201ENST00000569476 RBM12B-AS1Q9P1G2 102 aa4.06□□□□□ -1.76
LINC00559-201ENST00000569476 FLG2Q5D862 2391 aaPredicted RBP4.06□□□□□ -1.76
LINC00559-201ENST00000569476 RYR1P21817 5038 aa4.05□□□□□ -1.76
LINC00559-201ENST00000569476 S4R3F8 94 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms