RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 TMEM256-PLSCR3K7ERE1 68 aa6.94□□□□□ -1.3
CNOT1-215ENST00000569020 TRACP01848 142 aa6.93□□□□□ -1.3
CNOT1-215ENST00000569020 SIGMAR1Q99720 223 aa6.93□□□□□ -1.3
CNOT1-215ENST00000569020 ANKRD29Q8N6D5 301 aa6.92□□□□□ -1.3
CNOT1-215ENST00000569020 FAM236DA0A1B0GTK5 79 aa6.91□□□□□ -1.3
CNOT1-215ENST00000569020 SCGB1C2P0DMR2 95 aa6.91□□□□□ -1.3
CNOT1-215ENST00000569020 FAM236CP0DP71 79 aa6.91□□□□□ -1.3
CNOT1-215ENST00000569020 LINC00313P59037 77 aa6.91□□□□□ -1.3
CNOT1-215ENST00000569020 UBE2V1Q13404 147 aa6.91□□□□□ -1.3
CNOT1-215ENST00000569020 TRBV7-4A0A0J9YYF1 115 aa6.9□□□□□ -1.3
CNOT1-215ENST00000569020 M0R143 59 aa6.9□□□□□ -1.3
CNOT1-215ENST00000569020 IGKV4-1P06312 121 aa6.88□□□□□ -1.31
CNOT1-215ENST00000569020 CCKP06307 115 aa6.87□□□□□ -1.31
CNOT1-215ENST00000569020 RBM12B-AS1Q9P1G2 102 aa6.87□□□□□ -1.31
CNOT1-215ENST00000569020 KRTAP9-7A8MTY7 169 aa6.86□□□□□ -1.31
CNOT1-215ENST00000569020 KRTAP16-1A8MUX0 517 aa6.86□□□□□ -1.31
CNOT1-215ENST00000569020 KRTAP19-4Q3LI73 84 aa6.86□□□□□ -1.31
CNOT1-215ENST00000569020 NAA38Q9BRA0 125 aaKnown RBP6.86□□□□□ -1.31
CNOT1-215ENST00000569020 USH2AO75445 5202 aa6.83□□□□□ -1.32
CNOT1-215ENST00000569020 MT2AP02795 61 aa6.83□□□□□ -1.32
CNOT1-215ENST00000569020 BAALC-AS2P0C853 105 aa6.83□□□□□ -1.32
CNOT1-215ENST00000569020 RBM3P98179 157 aaKnown RBP6.83□□□□□ -1.32
CNOT1-215ENST00000569020 LINC00472Q9H8W2 130 aa6.82□□□□□ -1.32
CNOT1-215ENST00000569020 SSPOA2VEC9 5147 aa6.82□□□□□ -1.32
CNOT1-215ENST00000569020 HRES1P13985 223 aa6.81□□□□□ -1.32
CNOT1-215ENST00000569020 ATXN8Q156A1 80 aa6.81□□□□□ -1.32
CNOT1-215ENST00000569020 DEFB116Q30KQ4 102 aa6.81□□□□□ -1.32
CNOT1-215ENST00000569020 LCE5AQ5TCM9 118 aa6.81□□□□□ -1.32
CNOT1-215ENST00000569020 NOTCH2NLQ7Z3S9 236 aa6.81□□□□□ -1.32
CNOT1-215ENST00000569020 VPS25Q9BRG1 176 aa6.81□□□□□ -1.32
CNOT1-215ENST00000569020 IGHV6-1A0A0B4J1U7 121 aa6.8□□□□□ -1.32
CNOT1-215ENST00000569020 A0A1B0GV90 55 aa6.8□□□□□ -1.32
CNOT1-215ENST00000569020 MPLKIPQ8TAP9 179 aa6.8□□□□□ -1.32
CNOT1-215ENST00000569020 DSCR8Q96T75 97 aa6.8□□□□□ -1.32
CNOT1-215ENST00000569020 C9JAW5 83 aa6.77□□□□□ -1.33
CNOT1-215ENST00000569020 MT1FP04733 61 aa6.77□□□□□ -1.33
CNOT1-215ENST00000569020 KRTAP10-10P60014 251 aa6.77□□□□□ -1.33
CNOT1-215ENST00000569020 BATFQ16520 125 aa6.77□□□□□ -1.33
CNOT1-215ENST00000569020 MTURNQ8N3F0 131 aa6.77□□□□□ -1.33
CNOT1-215ENST00000569020 C8orf87E5RJ46 101 aa6.75□□□□□ -1.33
CNOT1-215ENST00000569020 LYRM7Q5U5X0 104 aa6.75□□□□□ -1.33
CNOT1-215ENST00000569020 JMJD7-PLA2G4BH0Y9G9 81 aa6.74□□□□□ -1.33
CNOT1-215ENST00000569020 C21orf62-AS1Q17RA5 79 aa6.74□□□□□ -1.33
CNOT1-215ENST00000569020 COL5A1-AS1Q5SY13 56 aa6.74□□□□□ -1.33
CNOT1-215ENST00000569020 Q6ZQT0 140 aa6.74□□□□□ -1.33
CNOT1-215ENST00000569020 LOC110117498A0A087WWA1 95 aa6.73□□□□□ -1.33
CNOT1-215ENST00000569020 A0A1B0GVX0 72 aa6.73□□□□□ -1.33
CNOT1-215ENST00000569020 KRTAP9-3Q9BYQ3 159 aa6.73□□□□□ -1.33
CNOT1-215ENST00000569020 ZCCHC13Q8WW36 166 aaKnown RBP6.7□□□□□ -1.34
CNOT1-215ENST00000569020 C14orf132Q9NPU4 83 aa6.7□□□□□ -1.34
CNOT1-215ENST00000569020 A0A1B0GW54 56 aa6.69□□□□□ -1.34
CNOT1-215ENST00000569020 C9orf118A6NHY6 69 aa6.69□□□□□ -1.34
CNOT1-215ENST00000569020 J3KT08 172 aa6.69□□□□□ -1.34
CNOT1-215ENST00000569020 TAX1BP3O14907 124 aa6.69□□□□□ -1.34
CNOT1-215ENST00000569020 FCGBPQ9Y6R7 5405 aaPredicted RBP6.68□□□□□ -1.34
CNOT1-215ENST00000569020 PDE6GP18545 87 aa6.68□□□□□ -1.34
CNOT1-215ENST00000569020 SPINK7P58062 85 aa6.68□□□□□ -1.34
CNOT1-215ENST00000569020 KRTAP5-3Q6L8H2 238 aa6.68□□□□□ -1.34
CNOT1-215ENST00000569020 A0A1W2PPM0 123 aa6.67□□□□□ -1.34
CNOT1-215ENST00000569020 H3BT86 120 aa6.65□□□□□ -1.34
CNOT1-215ENST00000569020 LINC00846Q9NV44 126 aa6.65□□□□□ -1.34
CNOT1-215ENST00000569020 NDUFB1O75438 58 aa6.64□□□□□ -1.35
CNOT1-215ENST00000569020 A8MWP4 228 aa6.62□□□□□ -1.35
CNOT1-215ENST00000569020 Q8N9P0 234 aaPredicted RBP6.62□□□□□ -1.35
CNOT1-215ENST00000569020 MACF1Q9UPN3 7388 aaKnown RBP6.61□□□□□ -1.35
CNOT1-215ENST00000569020 IGKV3D-7A0A0C4DH55 119 aa6.61□□□□□ -1.35
CNOT1-215ENST00000569020 C8orf17Q9NRJ1 99 aa6.6□□□□□ -1.35
CNOT1-215ENST00000569020 SYNE2Q8WXH0 6885 aaKnown RBP6.6□□□□□ -1.35
CNOT1-215ENST00000569020 NREPQ16612 68 aa6.59□□□□□ -1.35
CNOT1-215ENST00000569020 WFDC13Q8IUB5 93 aa6.59□□□□□ -1.35
CNOT1-215ENST00000569020 SPCS1Q9Y6A9 102 aa6.58□□□□□ -1.36
CNOT1-215ENST00000569020 KRTAP19-6Q3LI70 58 aa6.56□□□□□ -1.36
CNOT1-215ENST00000569020 PRR15Q8IV56 129 aa6.56□□□□□ -1.36
CNOT1-215ENST00000569020 Q6ZVQ6 151 aa6.54□□□□□ -1.36
CNOT1-215ENST00000569020 MMP24-AS1A0A0U1RRL7 71 aa6.53□□□□□ -1.36
CNOT1-215ENST00000569020 K7EQZ3 153 aa6.52□□□□□ -1.37
CNOT1-215ENST00000569020 GTF2H5Q6ZYL4 71 aa6.5□□□□□ -1.37
CNOT1-215ENST00000569020 TMEM254Q8TBM7 123 aa6.5□□□□□ -1.37
CNOT1-215ENST00000569020 PRO0461Q9UI25 63 aa6.5□□□□□ -1.37
CNOT1-215ENST00000569020 MRPL34Q9BQ48 92 aaKnown RBP6.49□□□□□ -1.37
CNOT1-215ENST00000569020 K7EP34 96 aa6.48□□□□□ -1.37
CNOT1-215ENST00000569020 BPY2O14599 106 aa6.48□□□□□ -1.37
CNOT1-215ENST00000569020 hDV103S1A0JD37 113 aa6.46□□□□□ -1.38
CNOT1-215ENST00000569020 H1FX-AS1Q4G0G2 97 aa6.46□□□□□ -1.38
CNOT1-215ENST00000569020 NDUFS5O43920 106 aa6.44□□□□□ -1.38
CNOT1-215ENST00000569020 K7ERU9 68 aa6.43□□□□□ -1.38
CNOT1-215ENST00000569020 Q8N9L7 120 aa6.43□□□□□ -1.38
CNOT1-215ENST00000569020 IGKV2D-30A0A075B6S6 120 aa6.38□□□□□ -1.39
CNOT1-215ENST00000569020 IGKV2-30P06310 120 aa6.38□□□□□ -1.39
CNOT1-215ENST00000569020 CASC2Q6XLA1 102 aa6.38□□□□□ -1.39
CNOT1-215ENST00000569020 UBL5Q9BZL1 73 aa6.38□□□□□ -1.39
CNOT1-215ENST00000569020 KRTAP6-3Q3LI67 103 aa6.37□□□□□ -1.39
CNOT1-215ENST00000569020 Q5W150 140 aa6.37□□□□□ -1.39
CNOT1-215ENST00000569020 C7orf65Q6ZTY9 151 aa6.37□□□□□ -1.39
CNOT1-215ENST00000569020 HCG22E2RYF7 251 aa6.34□□□□□ -1.39
CNOT1-215ENST00000569020 F8W1H4 67 aa6.34□□□□□ -1.39
CNOT1-215ENST00000569020 PCP4P48539 62 aa6.34□□□□□ -1.39
CNOT1-215ENST00000569020 J3QR89 54 aa6.33□□□□□ -1.4
CNOT1-215ENST00000569020 ETDBQ3ZM63 59 aa6.33□□□□□ -1.4
CNOT1-215ENST00000569020 CXCL6P80162 114 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms