RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 SS18L2Q9UHA2 77 aa5.03□□□□□ -1.6
SF3B3-211ENST00000568291 CCKP06307 115 aa5.02□□□□□ -1.61
SF3B3-211ENST00000568291 BAALC-AS2P0C853 105 aa5.02□□□□□ -1.61
SF3B3-211ENST00000568291 LCE5AQ5TCM9 118 aa5.02□□□□□ -1.61
SF3B3-211ENST00000568291 M0R143 59 aa5.01□□□□□ -1.61
SF3B3-211ENST00000568291 SIGMAR1Q99720 223 aa5.01□□□□□ -1.61
SF3B3-211ENST00000568291 KRTAP10-6P60371 365 aaPredicted RBP5□□□□□ -1.61
SF3B3-211ENST00000568291 UBE2V1Q13404 147 aa5□□□□□ -1.61
SF3B3-211ENST00000568291 TRBV7-4A0A0J9YYF1 115 aa4.99□□□□□ -1.61
SF3B3-211ENST00000568291 IGKV4-1P06312 121 aa4.99□□□□□ -1.61
SF3B3-211ENST00000568291 NOTCH2NLQ7Z3S9 236 aa4.99□□□□□ -1.61
SF3B3-211ENST00000568291 KRTAP9-3Q9BYQ3 159 aa4.99□□□□□ -1.61
SF3B3-211ENST00000568291 H3BQ85 93 aa4.98□□□□□ -1.61
SF3B3-211ENST00000568291 RBM3P98179 157 aaKnown RBP4.98□□□□□ -1.61
SF3B3-211ENST00000568291 ATP11AUNQ6ZP68 121 aa4.98□□□□□ -1.61
SF3B3-211ENST00000568291 M0R2T5 61 aa4.97□□□□□ -1.61
SF3B3-211ENST00000568291 Q75L30 129 aa4.97□□□□□ -1.61
SF3B3-211ENST00000568291 PCP4L1A6NKN8 68 aa4.96□□□□□ -1.62
SF3B3-211ENST00000568291 ATXN8Q156A1 80 aa4.96□□□□□ -1.62
SF3B3-211ENST00000568291 COX6B2Q6YFQ2 88 aa4.96□□□□□ -1.62
SF3B3-211ENST00000568291 DSCR8Q96T75 97 aa4.96□□□□□ -1.62
SF3B3-211ENST00000568291 LINC00472Q9H8W2 130 aa4.96□□□□□ -1.62
SF3B3-211ENST00000568291 IGHV6-1A0A0B4J1U7 121 aa4.95□□□□□ -1.62
SF3B3-211ENST00000568291 A8MUU9 505 aa4.94□□□□□ -1.62
SF3B3-211ENST00000568291 C9JAW5 83 aa4.94□□□□□ -1.62
SF3B3-211ENST00000568291 LINC00313P59037 77 aa4.94□□□□□ -1.62
SF3B3-211ENST00000568291 MTURNQ8N3F0 131 aa4.94□□□□□ -1.62
SF3B3-211ENST00000568291 C20orf166-AS1Q96NR2 134 aa4.94□□□□□ -1.62
SF3B3-211ENST00000568291 FLGP20930 4061 aaPredicted RBP4.94□□□□□ -1.62
SF3B3-211ENST00000568291 KRTAP16-1A8MUX0 517 aa4.93□□□□□ -1.62
SF3B3-211ENST00000568291 TAX1BP3O14907 124 aa4.92□□□□□ -1.62
SF3B3-211ENST00000568291 C14orf132Q9NPU4 83 aa4.92□□□□□ -1.62
SF3B3-211ENST00000568291 Q6ZQT0 140 aa4.91□□□□□ -1.62
SF3B3-211ENST00000568291 TRBV20-1A0A075B6N2 111 aa4.88□□□□□ -1.63
SF3B3-211ENST00000568291 A0A1B0GVX0 72 aa4.88□□□□□ -1.63
SF3B3-211ENST00000568291 A0A1W2PPM0 123 aa4.88□□□□□ -1.63
SF3B3-211ENST00000568291 JMJD7-PLA2G4BH0Y9G9 81 aa4.88□□□□□ -1.63
SF3B3-211ENST00000568291 LOC110117498A0A087WWA1 95 aa4.87□□□□□ -1.63
SF3B3-211ENST00000568291 LYRM7Q5U5X0 104 aa4.86□□□□□ -1.63
SF3B3-211ENST00000568291 COL5A1-AS1Q5SY13 56 aa4.84□□□□□ -1.63
SF3B3-211ENST00000568291 IGKV3D-7A0A0C4DH55 119 aa4.83□□□□□ -1.64
SF3B3-211ENST00000568291 J3KT08 172 aa4.83□□□□□ -1.64
SF3B3-211ENST00000568291 NREPQ16612 68 aa4.83□□□□□ -1.64
SF3B3-211ENST00000568291 SPCS1Q9Y6A9 102 aa4.83□□□□□ -1.64
SF3B3-211ENST00000568291 C8orf87E5RJ46 101 aa4.82□□□□□ -1.64
SF3B3-211ENST00000568291 PDE6GP18545 87 aa4.82□□□□□ -1.64
SF3B3-211ENST00000568291 A8MWP4 228 aa4.81□□□□□ -1.64
SF3B3-211ENST00000568291 H3BT86 120 aa4.81□□□□□ -1.64
SF3B3-211ENST00000568291 NDUFB1O75438 58 aa4.81□□□□□ -1.64
SF3B3-211ENST00000568291 C8orf17Q9NRJ1 99 aa4.81□□□□□ -1.64
SF3B3-211ENST00000568291 HRES1P13985 223 aa4.79□□□□□ -1.64
SF3B3-211ENST00000568291 ZCCHC13Q8WW36 166 aaKnown RBP4.79□□□□□ -1.64
SF3B3-211ENST00000568291 FAM236DA0A1B0GTK5 79 aa4.78□□□□□ -1.64
SF3B3-211ENST00000568291 FAM236CP0DP71 79 aa4.78□□□□□ -1.64
SF3B3-211ENST00000568291 PRR15Q8IV56 129 aa4.78□□□□□ -1.64
SF3B3-211ENST00000568291 A0A1B0GW54 56 aa4.77□□□□□ -1.65
SF3B3-211ENST00000568291 K7EQZ3 153 aa4.77□□□□□ -1.65
SF3B3-211ENST00000568291 Q6ZVQ6 151 aa4.77□□□□□ -1.65
SF3B3-211ENST00000568291 A0A1B0GV90 55 aa4.76□□□□□ -1.65
SF3B3-211ENST00000568291 SPINK7P58062 85 aa4.76□□□□□ -1.65
SF3B3-211ENST00000568291 Q8N9L7 120 aa4.76□□□□□ -1.65
SF3B3-211ENST00000568291 Q8N9P0 234 aaPredicted RBP4.76□□□□□ -1.65
SF3B3-211ENST00000568291 MMP24-AS1A0A0U1RRL7 71 aa4.75□□□□□ -1.65
SF3B3-211ENST00000568291 K7EP34 96 aa4.75□□□□□ -1.65
SF3B3-211ENST00000568291 PRO0461Q9UI25 63 aa4.75□□□□□ -1.65
SF3B3-211ENST00000568291 MPLKIPQ8TAP9 179 aa4.74□□□□□ -1.65
SF3B3-211ENST00000568291 KRTAP9-8Q9BYQ0 159 aa4.74□□□□□ -1.65
SF3B3-211ENST00000568291 KRTAP3-1Q9BYR8 98 aa4.74□□□□□ -1.65
SF3B3-211ENST00000568291 KRTAP23-1A1A580 65 aa4.73□□□□□ -1.65
SF3B3-211ENST00000568291 BPY2O14599 106 aa4.73□□□□□ -1.65
SF3B3-211ENST00000568291 USH2AO75445 5202 aa4.72□□□□□ -1.65
SF3B3-211ENST00000568291 NDUFS5O43920 106 aa4.72□□□□□ -1.65
SF3B3-211ENST00000568291 RBM12B-AS1Q9P1G2 102 aa4.72□□□□□ -1.65
SF3B3-211ENST00000568291 hDV103S1A0JD37 113 aa4.71□□□□□ -1.66
SF3B3-211ENST00000568291 WFDC13Q8IUB5 93 aa4.71□□□□□ -1.66
SF3B3-211ENST00000568291 MRPL34Q9BQ48 92 aaKnown RBP4.71□□□□□ -1.66
SF3B3-211ENST00000568291 LINC00846Q9NV44 126 aa4.71□□□□□ -1.66
SF3B3-211ENST00000568291 SSPOA2VEC9 5147 aa4.7□□□□□ -1.66
SF3B3-211ENST00000568291 TMEM254Q8TBM7 123 aa4.7□□□□□ -1.66
SF3B3-211ENST00000568291 MT2AP02795 61 aa4.68□□□□□ -1.66
SF3B3-211ENST00000568291 Q5W150 140 aa4.68□□□□□ -1.66
SF3B3-211ENST00000568291 FCGBPQ9Y6R7 5405 aaPredicted RBP4.67□□□□□ -1.66
SF3B3-211ENST00000568291 ETDBQ3ZM63 59 aa4.66□□□□□ -1.66
SF3B3-211ENST00000568291 CASC2Q6XLA1 102 aa4.66□□□□□ -1.66
SF3B3-211ENST00000568291 GTF2H5Q6ZYL4 71 aa4.66□□□□□ -1.66
SF3B3-211ENST00000568291 MT1FP04733 61 aa4.65□□□□□ -1.67
SF3B3-211ENST00000568291 IGKV2D-30A0A075B6S6 120 aa4.64□□□□□ -1.67
SF3B3-211ENST00000568291 HCG22E2RYF7 251 aa4.64□□□□□ -1.67
SF3B3-211ENST00000568291 IGKV2-30P06310 120 aa4.64□□□□□ -1.67
SF3B3-211ENST00000568291 UBL5Q9BZL1 73 aa4.64□□□□□ -1.67
SF3B3-211ENST00000568291 F8W1H4 67 aa4.63□□□□□ -1.67
SF3B3-211ENST00000568291 SVIPQ8NHG7 77 aa4.63□□□□□ -1.67
SF3B3-211ENST00000568291 KRTAP10-10P60014 251 aa4.61□□□□□ -1.67
SF3B3-211ENST00000568291 KRTAP5-3Q6L8H2 238 aa4.58□□□□□ -1.68
SF3B3-211ENST00000568291 C4orf26Q17RF5 130 aa4.57□□□□□ -1.68
SF3B3-211ENST00000568291 H1FX-AS1Q4G0G2 97 aa4.56□□□□□ -1.68
SF3B3-211ENST00000568291 C7orf65Q6ZTY9 151 aa4.56□□□□□ -1.68
SF3B3-211ENST00000568291 CXCL6P80162 114 aa4.55□□□□□ -1.68
SF3B3-211ENST00000568291 MACF1Q9UPN3 7388 aaKnown RBP4.53□□□□□ -1.68
SF3B3-211ENST00000568291 KRTAP19-6Q3LI70 58 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 155 ms