RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 ACYP2P14621 99 aa4.6□□□□□ -1.67
ATXN3-250ENST00000568290 Q75L30 129 aa4.6□□□□□ -1.67
ATXN3-250ENST00000568290 KRTAP11-1Q8IUC1 163 aa4.6□□□□□ -1.67
ATXN3-250ENST00000568290 Q8N9P0 234 aaPredicted RBP4.6□□□□□ -1.67
ATXN3-250ENST00000568290 Q96NJ1 140 aa4.6□□□□□ -1.67
ATXN3-250ENST00000568290 PRR15LQ9BU68 103 aa4.6□□□□□ -1.67
ATXN3-250ENST00000568290 KRTAP4-11Q9BYQ6 195 aa4.6□□□□□ -1.67
ATXN3-250ENST00000568290 TENM3Q9P273 2699 aa4.6□□□□□ -1.67
ATXN3-250ENST00000568290 STAB1Q9NY15 2570 aa4.59□□□□□ -1.67
ATXN3-250ENST00000568290 BAHCC1Q9P281 2608 aa4.59□□□□□ -1.67
ATXN3-250ENST00000568290 DNAH3Q8TD57 4116 aa4.59□□□□□ -1.67
ATXN3-250ENST00000568290 PSPHP1O15172 72 aa4.59□□□□□ -1.67
ATXN3-250ENST00000568290 TRRAPQ9Y4A5 3859 aa4.59□□□□□ -1.68
ATXN3-250ENST00000568290 ATP11AUNQ6ZP68 121 aa4.58□□□□□ -1.68
ATXN3-250ENST00000568290 LINC01558Q9Y6Z2 57 aa4.58□□□□□ -1.68
ATXN3-250ENST00000568290 A8MUN3 132 aa4.57□□□□□ -1.68
ATXN3-250ENST00000568290 KRTAP4-2Q9BYR5 136 aa4.57□□□□□ -1.68
ATXN3-250ENST00000568290 A6NED7 52 aa4.56□□□□□ -1.68
ATXN3-250ENST00000568290 LINC00313P59037 77 aa4.56□□□□□ -1.68
ATXN3-250ENST00000568290 PMAIP1Q13794 54 aa4.56□□□□□ -1.68
ATXN3-250ENST00000568290 PCOTHQ58A44 107 aa4.56□□□□□ -1.68
ATXN3-250ENST00000568290 PKD1L1Q8TDX9 2849 aa4.55□□□□□ -1.68
ATXN3-250ENST00000568290 NOTCH1P46531 2555 aa4.55□□□□□ -1.68
ATXN3-250ENST00000568290 Q5VV11 94 aa4.55□□□□□ -1.68
ATXN3-250ENST00000568290 CIRBP-AS1Q8TBR5 109 aa4.55□□□□□ -1.68
ATXN3-250ENST00000568290 NBEAL1Q6ZS30 2694 aa4.54□□□□□ -1.68
ATXN3-250ENST00000568290 PANO1I0J062 215 aa4.54□□□□□ -1.68
ATXN3-250ENST00000568290 CDC42SE1Q9NRR8 79 aa4.54□□□□□ -1.68
ATXN3-250ENST00000568290 COL6A5A8TX70 2615 aa4.54□□□□□ -1.68
ATXN3-250ENST00000568290 FBN1P35555 2871 aaKnown RBP4.53□□□□□ -1.68
ATXN3-250ENST00000568290 SPINK6Q6UWN8 80 aa4.52□□□□□ -1.69
ATXN3-250ENST00000568290 LY6G6CO95867 125 aa4.51□□□□□ -1.69
ATXN3-250ENST00000568290 SPTSSBQ8NFR3 76 aa4.5□□□□□ -1.69
ATXN3-250ENST00000568290 MGAM2Q2M2H8 2515 aa4.5□□□□□ -1.69
ATXN3-250ENST00000568290 RPS29P62273 56 aaKnown RBP4.49□□□□□ -1.69
ATXN3-250ENST00000568290 SPAG11AQ6PDA7 123 aa4.49□□□□□ -1.69
ATXN3-250ENST00000568290 STAB2Q8WWQ8 2551 aa4.48□□□□□ -1.69
ATXN3-250ENST00000568290 SPINK1P00995 79 aa4.48□□□□□ -1.69
ATXN3-250ENST00000568290 HRES1P13985 223 aa4.48□□□□□ -1.69
ATXN3-250ENST00000568290 DMAC1Q96GE9 116 aa4.48□□□□□ -1.69
ATXN3-250ENST00000568290 CMYA5Q8N3K9 4069 aa4.47□□□□□ -1.69
ATXN3-250ENST00000568290 KRTAP4-5Q9BYR2 181 aa4.47□□□□□ -1.69
ATXN3-250ENST00000568290 DNAH1Q9P2D7 4330 aa4.47□□□□□ -1.69
ATXN3-250ENST00000568290 A0A087X002 238 aa4.46□□□□□ -1.7
ATXN3-250ENST00000568290 KTN1-AS1Q86SY8 53 aa4.46□□□□□ -1.7
ATXN3-250ENST00000568290 PRR26Q8N8Z3 221 aa4.46□□□□□ -1.7
ATXN3-250ENST00000568290 ANK2Q01484 3957 aa4.45□□□□□ -1.7
ATXN3-250ENST00000568290 IGKV2-30P06310 120 aa4.45□□□□□ -1.7
ATXN3-250ENST00000568290 HUWE1Q7Z6Z7 4374 aaKnown RBP4.45□□□□□ -1.7
ATXN3-250ENST00000568290 A0A1B0GU69 56 aa4.44□□□□□ -1.7
ATXN3-250ENST00000568290 SEC61GP60059 68 aa4.44□□□□□ -1.7
ATXN3-250ENST00000568290 KRTAP13-3Q3SY46 172 aa4.44□□□□□ -1.7
ATXN3-250ENST00000568290 Q5W150 140 aa4.44□□□□□ -1.7
ATXN3-250ENST00000568290 Q6ZSA8 131 aa4.44□□□□□ -1.7
ATXN3-250ENST00000568290 ANAPC11Q9NYG5 84 aa4.44□□□□□ -1.7
ATXN3-250ENST00000568290 TYMSOSQ8TAI1 123 aa4.43□□□□□ -1.7
ATXN3-250ENST00000568290 DYNC2H1Q8NCM8 4307 aaKnown RBP4.43□□□□□ -1.7
ATXN3-250ENST00000568290 KRTAP15-1Q3LI76 137 aa4.42□□□□□ -1.7
ATXN3-250ENST00000568290 UQCR11O14957 56 aa4.41□□□□□ -1.7
ATXN3-250ENST00000568290 C7orf65Q6ZTY9 151 aa4.4□□□□□ -1.71
ATXN3-250ENST00000568290 NOTCH2NLQ7Z3S9 236 aa4.39□□□□□ -1.71
ATXN3-250ENST00000568290 LCA10Q71F78 164 aa4.38□□□□□ -1.71
ATXN3-250ENST00000568290 IGKV2D-30A0A075B6S6 120 aa4.37□□□□□ -1.71
ATXN3-250ENST00000568290 LINC00304Q8N9R0 145 aa4.37□□□□□ -1.71
ATXN3-250ENST00000568290 A6NN06 94 aa4.36□□□□□ -1.71
ATXN3-250ENST00000568290 KRTAP21-3Q3LHN1 58 aa4.36□□□□□ -1.71
ATXN3-250ENST00000568290 KRTAP13-2Q52LG2 175 aa4.36□□□□□ -1.71
ATXN3-250ENST00000568290 KRTAP16-1A8MUX0 517 aa4.34□□□□□ -1.71
ATXN3-250ENST00000568290 SPATA8Q6RVD6 105 aa4.34□□□□□ -1.71
ATXN3-250ENST00000568290 KRTAP10-1P60331 282 aa4.33□□□□□ -1.72
ATXN3-250ENST00000568290 MIR22HGQ0VDD5 57 aa4.33□□□□□ -1.72
ATXN3-250ENST00000568290 COL7A1Q02388 2944 aa4.33□□□□□ -1.72
ATXN3-250ENST00000568290 DNAH9Q9NYC9 4486 aa4.33□□□□□ -1.72
ATXN3-250ENST00000568290 KRTAP1-4P0C5Y4 121 aa4.32□□□□□ -1.72
ATXN3-250ENST00000568290 SPINK7P58062 85 aa4.32□□□□□ -1.72
ATXN3-250ENST00000568290 SRRM2Q9UQ35 2752 aaKnown RBP4.32□□□□□ -1.72
ATXN3-250ENST00000568290 TENM2Q9NT68 2774 aa4.31□□□□□ -1.72
ATXN3-250ENST00000568290 VPS13DQ5THJ4 4388 aa4.3□□□□□ -1.72
ATXN3-250ENST00000568290 RETNLBQ9BQ08 111 aa4.28□□□□□ -1.72
ATXN3-250ENST00000568290 DNAH10Q8IVF4 4471 aa4.27□□□□□ -1.73
ATXN3-250ENST00000568290 K7ERS5 55 aa4.27□□□□□ -1.73
ATXN3-250ENST00000568290 C20orf166-AS1Q96NR2 134 aa4.26□□□□□ -1.73
ATXN3-250ENST00000568290 DNAH7Q8WXX0 4024 aa4.26□□□□□ -1.73
ATXN3-250ENST00000568290 PLECQ15149 4684 aaKnown RBP4.26□□□□□ -1.73
ATXN3-250ENST00000568290 HECTD4Q9Y4D8 3996 aa4.26□□□□□ -1.73
ATXN3-250ENST00000568290 MEGF8Q7Z7M0 2845 aa4.25□□□□□ -1.73
ATXN3-250ENST00000568290 A8MUU9 505 aa4.25□□□□□ -1.73
ATXN3-250ENST00000568290 LYSTQ99698 3801 aa4.25□□□□□ -1.73
ATXN3-250ENST00000568290 RBM12B-AS1Q9P1G2 102 aa4.25□□□□□ -1.73
ATXN3-250ENST00000568290 A8MU10 97 aa4.23□□□□□ -1.73
ATXN3-250ENST00000568290 CSMD3Q7Z407 3707 aa4.22□□□□□ -1.73
ATXN3-250ENST00000568290 DNAH6Q9C0G6 4158 aa4.22□□□□□ -1.73
ATXN3-250ENST00000568290 DNAH17Q9UFH2 4485 aa4.22□□□□□ -1.73
ATXN3-250ENST00000568290 PRKDCP78527 4128 aaKnown RBP4.21□□□□□ -1.74
ATXN3-250ENST00000568290 TGP01266 2768 aa4.2□□□□□ -1.74
ATXN3-250ENST00000568290 STARD9Q9P2P6 4700 aa4.17□□□□□ -1.74
ATXN3-250ENST00000568290 A0A1B0GU33 70 aa4.17□□□□□ -1.74
ATXN3-250ENST00000568290 ALMS1Q8TCU4 4167 aa4.17□□□□□ -1.74
ATXN3-250ENST00000568290 COX6B2Q6YFQ2 88 aa4.16□□□□□ -1.74
ATXN3-250ENST00000568290 DNAH2Q9P225 4427 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms