RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 DNAH11Q96DT5 4516 aa3.63□□□□□ -1.83
CAPN3-218ENST00000568153 A0A087WSZ3 146 aa3.63□□□□□ -1.83
CAPN3-218ENST00000568153 BPY2O14599 106 aa3.63□□□□□ -1.83
CAPN3-218ENST00000568153 HIST1H4AP62805 103 aaKnown RBP3.63□□□□□ -1.83
CAPN3-218ENST00000568153 MOBPQ13875 183 aa3.63□□□□□ -1.83
CAPN3-218ENST00000568153 FAM229BQ4G0N7 80 aa3.63□□□□□ -1.83
CAPN3-218ENST00000568153 PKD1P98161 4303 aa3.62□□□□□ -1.83
CAPN3-218ENST00000568153 SACSQ9NZJ4 4579 aa3.62□□□□□ -1.83
CAPN3-218ENST00000568153 FAT2Q9NYQ8 4349 aa3.62□□□□□ -1.83
CAPN3-218ENST00000568153 CDK2AP2O75956 126 aa3.62□□□□□ -1.83
CAPN3-218ENST00000568153 HRCT1Q6UXD1 115 aa3.62□□□□□ -1.83
CAPN3-218ENST00000568153 CD164Q04900 197 aa3.61□□□□□ -1.83
CAPN3-218ENST00000568153 SS18L2Q9UHA2 77 aa3.6□□□□□ -1.83
CAPN3-218ENST00000568153 DNAH8Q96JB1 4490 aa3.6□□□□□ -1.83
CAPN3-218ENST00000568153 DNAH5Q8TE73 4624 aa3.59□□□□□ -1.83
CAPN3-218ENST00000568153 J3KT08 172 aa3.59□□□□□ -1.83
CAPN3-218ENST00000568153 KRTAP1-4P0C5Y4 121 aa3.59□□□□□ -1.83
CAPN3-218ENST00000568153 KRTAP13-2Q52LG2 175 aa3.59□□□□□ -1.83
CAPN3-218ENST00000568153 LCE1FQ5T754 118 aa3.59□□□□□ -1.83
CAPN3-218ENST00000568153 LINC00472Q9H8W2 130 aa3.59□□□□□ -1.83
CAPN3-218ENST00000568153 SRRM2Q9UQ35 2752 aaKnown RBP3.58□□□□□ -1.84
CAPN3-218ENST00000568153 A0A087WVE0 104 aa3.58□□□□□ -1.84
CAPN3-218ENST00000568153 DEFB116Q30KQ4 102 aa3.58□□□□□ -1.84
CAPN3-218ENST00000568153 TYMSOSQ8TAI1 123 aa3.58□□□□□ -1.84
CAPN3-218ENST00000568153 FAM236AA0A1B0GUQ0 79 aa3.57□□□□□ -1.84
CAPN3-218ENST00000568153 FAM236BA0A1B0GV22 79 aa3.57□□□□□ -1.84
CAPN3-218ENST00000568153 NDUFB1O75438 58 aa3.57□□□□□ -1.84
CAPN3-218ENST00000568153 DSCR10P59022 87 aa3.57□□□□□ -1.84
CAPN3-218ENST00000568153 KRTAP10-4P60372 401 aaPredicted RBP3.57□□□□□ -1.84
CAPN3-218ENST00000568153 ANAPC13Q9BS18 74 aa3.57□□□□□ -1.84
CAPN3-218ENST00000568153 LRP1BQ9NZR2 4599 aa3.56□□□□□ -1.84
CAPN3-218ENST00000568153 IGLV7-46A0A075B6I9 117 aa3.56□□□□□ -1.84
CAPN3-218ENST00000568153 NDUFAF8A1L188 74 aa3.56□□□□□ -1.84
CAPN3-218ENST00000568153 KRTAP16-1A8MUX0 517 aa3.56□□□□□ -1.84
CAPN3-218ENST00000568153 ATOX1O00244 68 aa3.56□□□□□ -1.84
CAPN3-218ENST00000568153 IGKV4-1P06312 121 aa3.56□□□□□ -1.84
CAPN3-218ENST00000568153 Q8N9L7 120 aa3.56□□□□□ -1.84
CAPN3-218ENST00000568153 UBR4Q5T4S7 5183 aa3.56□□□□□ -1.84
CAPN3-218ENST00000568153 A8MWP4 228 aa3.55□□□□□ -1.84
CAPN3-218ENST00000568153 SPAG11AQ6PDA7 123 aa3.55□□□□□ -1.84
CAPN3-218ENST00000568153 PRR15Q8IV56 129 aa3.55□□□□□ -1.84
CAPN3-218ENST00000568153 SPINK1P00995 79 aa3.54□□□□□ -1.84
CAPN3-218ENST00000568153 KRTAP10-5P60370 271 aa3.54□□□□□ -1.84
CAPN3-218ENST00000568153 ASB16-AS1Q495Z4 193 aa3.54□□□□□ -1.84
CAPN3-218ENST00000568153 Q5XG85 94 aa3.54□□□□□ -1.84
CAPN3-218ENST00000568153 SMIM20Q8N5G0 67 aa3.54□□□□□ -1.84
CAPN3-218ENST00000568153 Q96NJ1 140 aa3.54□□□□□ -1.84
CAPN3-218ENST00000568153 K7EQZ3 153 aa3.53□□□□□ -1.84
CAPN3-218ENST00000568153 Q5VSD8 79 aa3.53□□□□□ -1.84
CAPN3-218ENST00000568153 LIMD2Q9BT23 127 aa3.53□□□□□ -1.84
CAPN3-218ENST00000568153 DYNC1H1Q14204 4646 aaKnown RBP3.53□□□□□ -1.84
CAPN3-218ENST00000568153 HCG22E2RYF7 251 aa3.52□□□□□ -1.85
CAPN3-218ENST00000568153 SERP2Q8N6R1 65 aa3.52□□□□□ -1.85
CAPN3-218ENST00000568153 LINC00304Q8N9R0 145 aa3.52□□□□□ -1.85
CAPN3-218ENST00000568153 TRAV7A0A075B6U4 112 aa3.51□□□□□ -1.85
CAPN3-218ENST00000568153 RPS29P62273 56 aaKnown RBP3.51□□□□□ -1.85
CAPN3-218ENST00000568153 C1orf195Q5TG92 126 aa3.51□□□□□ -1.85
CAPN3-218ENST00000568153 IGHV6-1A0A0B4J1U7 121 aa3.5□□□□□ -1.85
CAPN3-218ENST00000568153 A0A1B0GVX0 72 aa3.5□□□□□ -1.85
CAPN3-218ENST00000568153 UQCRQO14949 82 aa3.5□□□□□ -1.85
CAPN3-218ENST00000568153 COX7CP15954 63 aa3.5□□□□□ -1.85
CAPN3-218ENST00000568153 KRTAP10-12P60413 245 aa3.5□□□□□ -1.85
CAPN3-218ENST00000568153 CASC2Q6XLA1 102 aa3.5□□□□□ -1.85
CAPN3-218ENST00000568153 PKHD1P08F94 4074 aa3.5□□□□□ -1.85
CAPN3-218ENST00000568153 VPS13BQ7Z7G8 4022 aa3.5□□□□□ -1.85
CAPN3-218ENST00000568153 KRTAP10-8P60410 259 aa3.49□□□□□ -1.85
CAPN3-218ENST00000568153 WFDC13Q8IUB5 93 aa3.49□□□□□ -1.85
CAPN3-218ENST00000568153 C8orf17Q9NRJ1 99 aa3.49□□□□□ -1.85
CAPN3-218ENST00000568153 hDV103S1A0JD37 113 aa3.48□□□□□ -1.85
CAPN3-218ENST00000568153 CCDC179H3BU77 68 aa3.48□□□□□ -1.85
CAPN3-218ENST00000568153 HERC1Q15751 4861 aa3.47□□□□□ -1.85
CAPN3-218ENST00000568153 MMP24-AS1A0A0U1RRL7 71 aa3.47□□□□□ -1.85
CAPN3-218ENST00000568153 C8orf87E5RJ46 101 aa3.47□□□□□ -1.85
CAPN3-218ENST00000568153 LINC00313P59037 77 aa3.47□□□□□ -1.85
CAPN3-218ENST00000568153 OCR1Q9BZK8 76 aa3.47□□□□□ -1.85
CAPN3-218ENST00000568153 ABCA13Q86UQ4 5058 aa3.46□□□□□ -1.86
CAPN3-218ENST00000568153 C5orf47Q569G3 176 aa3.46□□□□□ -1.86
CAPN3-218ENST00000568153 APOBP04114 4563 aaKnown RBP3.46□□□□□ -1.86
CAPN3-218ENST00000568153 TMEM254Q8TBM7 123 aa3.45□□□□□ -1.86
CAPN3-218ENST00000568153 MRPL34Q9BQ48 92 aaKnown RBP3.45□□□□□ -1.86
CAPN3-218ENST00000568153 TP53AIP1Q9HCN2 124 aa3.45□□□□□ -1.86
CAPN3-218ENST00000568153 OXTP01178 125 aa3.44□□□□□ -1.86
CAPN3-218ENST00000568153 C20orf197Q8N268 126 aa3.44□□□□□ -1.86
CAPN3-218ENST00000568153 KIAA1109Q2LD37 5005 aa3.43□□□□□ -1.86
CAPN3-218ENST00000568153 NDUFS5O43920 106 aa3.43□□□□□ -1.86
CAPN3-218ENST00000568153 FAT1Q14517 4588 aa3.42□□□□□ -1.86
CAPN3-218ENST00000568153 MP68P56378 58 aa3.42□□□□□ -1.86
CAPN3-218ENST00000568153 H3BPC8 53 aa3.41□□□□□ -1.86
CAPN3-218ENST00000568153 A0A0U1RQV1 116 aa3.4□□□□□ -1.87
CAPN3-218ENST00000568153 NDUFC1O43677 76 aa3.4□□□□□ -1.87
CAPN3-218ENST00000568153 KLKP1Q107X0 134 aa3.4□□□□□ -1.87
CAPN3-218ENST00000568153 SNURFQ9Y675 71 aa3.4□□□□□ -1.87
CAPN3-218ENST00000568153 H0Y9P7 68 aa3.39□□□□□ -1.87
CAPN3-218ENST00000568153 MT1HL1P0DM35 61 aa3.39□□□□□ -1.87
CAPN3-218ENST00000568153 LINC00208Q96KT6 92 aa3.39□□□□□ -1.87
CAPN3-218ENST00000568153 HSPG2P98160 4391 aa3.39□□□□□ -1.87
CAPN3-218ENST00000568153 TRAV22A0A0B4J277 110 aa3.38□□□□□ -1.87
CAPN3-218ENST00000568153 FP248Q71RG6 208 aaPredicted RBP3.38□□□□□ -1.87
CAPN3-218ENST00000568153 C1orf64Q8NEQ6 169 aa3.38□□□□□ -1.87
CAPN3-218ENST00000568153 RETNLBQ9BQ08 111 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms