RNA–Protein interactions for RNA: ENST00000567880.5

TCF4-236, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-236ENST00000567880 A0A0G2JQZ4 141 aa6.23□□□□□ -1.41
TCF4-236ENST00000567880 TRBV7-4A0A0J9YYF1 115 aa6.23□□□□□ -1.41
TCF4-236ENST00000567880 MOBPQ13875 183 aa6.22□□□□□ -1.41
TCF4-236ENST00000567880 PMAIP1Q13794 54 aa6.21□□□□□ -1.41
TCF4-236ENST00000567880 KRTAP1-4P0C5Y4 121 aa6.21□□□□□ -1.42
TCF4-236ENST00000567880 IGFL1Q6UW32 110 aa6.21□□□□□ -1.42
TCF4-236ENST00000567880 KRTAP17-1Q9BYP8 105 aa6.21□□□□□ -1.42
TCF4-236ENST00000567880 IGLV8-61A0A075B6I0 122 aa6.2□□□□□ -1.42
TCF4-236ENST00000567880 A0A087X002 238 aa6.2□□□□□ -1.42
TCF4-236ENST00000567880 A0A0U1RQV1 116 aa6.19□□□□□ -1.42
TCF4-236ENST00000567880 SNURFQ9Y675 71 aa6.19□□□□□ -1.42
TCF4-236ENST00000567880 Q8NBF4 154 aa6.19□□□□□ -1.42
TCF4-236ENST00000567880 PRAC1Q96KF2 57 aa6.19□□□□□ -1.42
TCF4-236ENST00000567880 Q8N1X5 172 aa6.18□□□□□ -1.42
TCF4-236ENST00000567880 A0A1W2PNM2 257 aa6.17□□□□□ -1.42
TCF4-236ENST00000567880 NREPQ16612 68 aa6.17□□□□□ -1.42
TCF4-236ENST00000567880 FAM229BQ4G0N7 80 aa6.17□□□□□ -1.42
TCF4-236ENST00000567880 KRTAP13-2Q52LG2 175 aa6.17□□□□□ -1.42
TCF4-236ENST00000567880 TMEM254Q8TBM7 123 aa6.17□□□□□ -1.42
TCF4-236ENST00000567880 NDUFS5O43920 106 aa6.16□□□□□ -1.42
TCF4-236ENST00000567880 FLG2Q5D862 2391 aaPredicted RBP6.15□□□□□ -1.43
TCF4-236ENST00000567880 BPY2O14599 106 aa6.15□□□□□ -1.43
TCF4-236ENST00000567880 BRK1Q8WUW1 75 aa6.14□□□□□ -1.43
TCF4-236ENST00000567880 RBM12B-AS1Q9P1G2 102 aa6.14□□□□□ -1.43
TCF4-236ENST00000567880 TYMSOSQ8TAI1 123 aa6.13□□□□□ -1.43
TCF4-236ENST00000567880 PKHD1L1Q86WI1 4243 aa6.13□□□□□ -1.43
TCF4-236ENST00000567880 SSBP3-AS1Q7Z2R9 100 aa6.13□□□□□ -1.43
TCF4-236ENST00000567880 A0A087WSZ3 146 aa6.11□□□□□ -1.43
TCF4-236ENST00000567880 OCR1Q9BZK8 76 aa6.11□□□□□ -1.43
TCF4-236ENST00000567880 BIRC6Q9NR09 4857 aa6.09□□□□□ -1.43
TCF4-236ENST00000567880 KRTAP4-5Q9BYR2 181 aa6.09□□□□□ -1.44
TCF4-236ENST00000567880 A0A1B0GW54 56 aa6.08□□□□□ -1.44
TCF4-236ENST00000567880 IGKV4-1P06312 121 aa6.08□□□□□ -1.44
TCF4-236ENST00000567880 MPLKIPQ8TAP9 179 aa6.08□□□□□ -1.44
TCF4-236ENST00000567880 PRR15Q8IV56 129 aa6.07□□□□□ -1.44
TCF4-236ENST00000567880 LRP1Q07954 4544 aaKnown RBP6.06□□□□□ -1.44
TCF4-236ENST00000567880 LINC00304Q8N9R0 145 aa6.05□□□□□ -1.44
TCF4-236ENST00000567880 Q1T7F1 81 aa6.05□□□□□ -1.44
TCF4-236ENST00000567880 hDV103S1A0JD37 113 aa6.04□□□□□ -1.44
TCF4-236ENST00000567880 DEFB116Q30KQ4 102 aa6.03□□□□□ -1.44
TCF4-236ENST00000567880 NOTCH2NLQ7Z3S9 236 aa6.03□□□□□ -1.44
TCF4-236ENST00000567880 PSPHP1O15172 72 aa6.02□□□□□ -1.45
TCF4-236ENST00000567880 MYCBP2O75592 4640 aa6.02□□□□□ -1.45
TCF4-236ENST00000567880 SPINK1P00995 79 aa6.01□□□□□ -1.45
TCF4-236ENST00000567880 KRTAP10-8P60410 259 aa6□□□□□ -1.45
TCF4-236ENST00000567880 SPAG11AQ6PDA7 123 aa6□□□□□ -1.45
TCF4-236ENST00000567880 FAT3Q8TDW7 4589 aa6□□□□□ -1.45
TCF4-236ENST00000567880 LIMD2Q9BT23 127 aa5.99□□□□□ -1.45
TCF4-236ENST00000567880 DMBT1Q9UGM3 2413 aaPredicted RBP5.99□□□□□ -1.45
TCF4-236ENST00000567880 IGHV6-1A0A0B4J1U7 121 aa5.99□□□□□ -1.45
TCF4-236ENST00000567880 Q8N9L7 120 aa5.99□□□□□ -1.45
TCF4-236ENST00000567880 HERC2O95714 4834 aa5.99□□□□□ -1.45
TCF4-236ENST00000567880 ZCCHC13Q8WW36 166 aaKnown RBP5.98□□□□□ -1.45
TCF4-236ENST00000567880 Q96NJ1 140 aa5.98□□□□□ -1.45
TCF4-236ENST00000567880 CYP4F30PQ9H0H9 118 aa5.98□□□□□ -1.45
TCF4-236ENST00000567880 LINC00472Q9H8W2 130 aa5.98□□□□□ -1.45
TCF4-236ENST00000567880 TNXBP22105 4242 aa5.98□□□□□ -1.45
TCF4-236ENST00000567880 ABCA13Q86UQ4 5058 aa5.97□□□□□ -1.45
TCF4-236ENST00000567880 NDUFB1O75438 58 aa5.96□□□□□ -1.46
TCF4-236ENST00000567880 MT1HL1P0DM35 61 aa5.96□□□□□ -1.46
TCF4-236ENST00000567880 C1orf64Q8NEQ6 169 aa5.96□□□□□ -1.46
TCF4-236ENST00000567880 MP68P56378 58 aa5.95□□□□□ -1.46
TCF4-236ENST00000567880 DSCR10P59022 87 aa5.95□□□□□ -1.46
TCF4-236ENST00000567880 RPS29P62273 56 aaKnown RBP5.95□□□□□ -1.46
TCF4-236ENST00000567880 ASB16-AS1Q495Z4 193 aa5.95□□□□□ -1.46
TCF4-236ENST00000567880 K7EQZ3 153 aa5.93□□□□□ -1.46
TCF4-236ENST00000567880 TRAV22A0A0B4J277 110 aa5.92□□□□□ -1.46
TCF4-236ENST00000567880 RETNLBQ9BQ08 111 aa5.92□□□□□ -1.46
TCF4-236ENST00000567880 KRTAP29-1A8MX34 341 aaPredicted RBP5.91□□□□□ -1.46
TCF4-236ENST00000567880 A8MWP4 228 aa5.91□□□□□ -1.46
TCF4-236ENST00000567880 LINC00313P59037 77 aa5.89□□□□□ -1.47
TCF4-236ENST00000567880 A0A1B0GVX0 72 aa5.87□□□□□ -1.47
TCF4-236ENST00000567880 HCG22E2RYF7 251 aa5.87□□□□□ -1.47
TCF4-236ENST00000567880 SPANXA2-OT1Q8N9U9 137 aa5.87□□□□□ -1.47
TCF4-236ENST00000567880 H3BPC8 53 aa5.87□□□□□ -1.47
TCF4-236ENST00000567880 PRR4Q16378 134 aa5.87□□□□□ -1.47
TCF4-236ENST00000567880 PCLOQ9Y6V0 5065 aa5.85□□□□□ -1.47
TCF4-236ENST00000567880 WFDC13Q8IUB5 93 aa5.85□□□□□ -1.47
TCF4-236ENST00000567880 A8MUN3 132 aa5.84□□□□□ -1.47
TCF4-236ENST00000567880 Q5VV11 94 aa5.83□□□□□ -1.48
TCF4-236ENST00000567880 C8orf17Q9NRJ1 99 aa5.83□□□□□ -1.48
TCF4-236ENST00000567880 MMP24-AS1A0A0U1RRL7 71 aa5.82□□□□□ -1.48
TCF4-236ENST00000567880 CASC2Q6XLA1 102 aa5.82□□□□□ -1.48
TCF4-236ENST00000567880 KTN1-AS1Q86SY8 53 aa5.81□□□□□ -1.48
TCF4-236ENST00000567880 KRTAP3-1Q9BYR8 98 aa5.81□□□□□ -1.48
TCF4-236ENST00000567880 LINC00208Q96KT6 92 aa5.8□□□□□ -1.48
TCF4-236ENST00000567880 C9orf92A6NGG3 77 aa5.8□□□□□ -1.48
TCF4-236ENST00000567880 ATP11AUNQ6ZP68 121 aa5.8□□□□□ -1.48
TCF4-236ENST00000567880 Q8N9P0 234 aaPredicted RBP5.8□□□□□ -1.48
TCF4-236ENST00000567880 IGLV7-46A0A075B6I9 117 aa5.78□□□□□ -1.48
TCF4-236ENST00000567880 CHKB-CPT1BH3BT56 60 aa5.78□□□□□ -1.48
TCF4-236ENST00000567880 LOC101927531A0A1B0GV80 90 aa5.77□□□□□ -1.49
TCF4-236ENST00000567880 MRPL34Q9BQ48 92 aaKnown RBP5.76□□□□□ -1.49
TCF4-236ENST00000567880 H0Y9P7 68 aa5.75□□□□□ -1.49
TCF4-236ENST00000567880 PRR15LQ9BU68 103 aa5.75□□□□□ -1.49
TCF4-236ENST00000567880 KRTAP16-1A8MUX0 517 aa5.74□□□□□ -1.49
TCF4-236ENST00000567880 CDC42SE1Q9NRR8 79 aa5.72□□□□□ -1.49
TCF4-236ENST00000567880 KRTAP13-3Q3SY46 172 aa5.71□□□□□ -1.5
TCF4-236ENST00000567880 A6NED7 52 aa5.7□□□□□ -1.5
TCF4-236ENST00000567880 A6NN06 94 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms