RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 HIVEP1P15822 2718 aa7.28□□□□□ -1.24
CSPG4P13-202ENST00000567704 H1FX-AS1Q4G0G2 97 aa7.28□□□□□ -1.24
CSPG4P13-202ENST00000567704 KRTAP11-1Q8IUC1 163 aa7.28□□□□□ -1.24
CSPG4P13-202ENST00000567704 DCHS1Q96JQ0 3298 aa7.27□□□□□ -1.24
CSPG4P13-202ENST00000567704 COX6B2Q6YFQ2 88 aa7.27□□□□□ -1.25
CSPG4P13-202ENST00000567704 CELSR2Q9HCU4 2923 aa7.27□□□□□ -1.25
CSPG4P13-202ENST00000567704 ZANQ9Y493 2812 aa7.21□□□□□ -1.25
CSPG4P13-202ENST00000567704 CAMK2N1Q7Z7J9 78 aa7.2□□□□□ -1.26
CSPG4P13-202ENST00000567704 S4R3F8 94 aa7.2□□□□□ -1.26
CSPG4P13-202ENST00000567704 KRTAP25-1Q3LHN0 102 aa7.2□□□□□ -1.26
CSPG4P13-202ENST00000567704 KRTAP21-3Q3LHN1 58 aa7.17□□□□□ -1.26
CSPG4P13-202ENST00000567704 HRNRQ86YZ3 2850 aaPredicted RBP7.17□□□□□ -1.26
CSPG4P13-202ENST00000567704 A0A0A0MQY5 61 aa7.16□□□□□ -1.26
CSPG4P13-202ENST00000567704 Q6ZSA8 131 aa7.16□□□□□ -1.26
CSPG4P13-202ENST00000567704 NIPBLQ6KC79 2804 aaeCLIP7.14□□□□□ -1.27
CSPG4P13-202ENST00000567704 LAMA5O15230 3695 aa7.13□□□□□ -1.27
CSPG4P13-202ENST00000567704 WDFY3Q8IZQ1 3526 aa7.12□□□□□ -1.27
CSPG4P13-202ENST00000567704 DCHS2Q6V1P9 2916 aa7.11□□□□□ -1.27
CSPG4P13-202ENST00000567704 FBN2P35556 2912 aa7.1□□□□□ -1.27
CSPG4P13-202ENST00000567704 KRTAP10-2P60368 255 aa7.09□□□□□ -1.27
CSPG4P13-202ENST00000567704 TENM4Q6N022 2769 aa7.09□□□□□ -1.27
CSPG4P13-202ENST00000567704 KRTAP10-1P60331 282 aa7.08□□□□□ -1.28
CSPG4P13-202ENST00000567704 R4GN34 69 aa7.08□□□□□ -1.28
CSPG4P13-202ENST00000567704 ASPMQ8IZT6 3477 aa7.08□□□□□ -1.28
CSPG4P13-202ENST00000567704 KRTAP16-1A8MUX0 517 aa7.07□□□□□ -1.28
CSPG4P13-202ENST00000567704 NF1P21359 2839 aa7.07□□□□□ -1.28
CSPG4P13-202ENST00000567704 KRTAP13-1Q8IUC0 172 aa7.06□□□□□ -1.28
CSPG4P13-202ENST00000567704 CRYBG3Q68DQ2 2970 aa7.05□□□□□ -1.28
CSPG4P13-202ENST00000567704 RELNP78509 3460 aa7.04□□□□□ -1.28
CSPG4P13-202ENST00000567704 NDUFAF8A1L188 74 aa7.04□□□□□ -1.28
CSPG4P13-202ENST00000567704 ZFHX4Q86UP3 3567 aa7.02□□□□□ -1.29
CSPG4P13-202ENST00000567704 M0QZ58 72 aa6.99□□□□□ -1.29
CSPG4P13-202ENST00000567704 Q6ZRN7 208 aaPredicted RBP6.98□□□□□ -1.29
CSPG4P13-202ENST00000567704 PDZD2O15018 2839 aa6.97□□□□□ -1.29
CSPG4P13-202ENST00000567704 A8MUU9 505 aa6.97□□□□□ -1.29
CSPG4P13-202ENST00000567704 KRTAP13-2Q52LG2 175 aa6.96□□□□□ -1.3
CSPG4P13-202ENST00000567704 SMG1Q96Q15 3661 aaKnown RBP6.89□□□□□ -1.31
CSPG4P13-202ENST00000567704 BSNQ9UPA5 3926 aa6.86□□□□□ -1.31
CSPG4P13-202ENST00000567704 MXRA5Q9NR99 2828 aa6.84□□□□□ -1.31
CSPG4P13-202ENST00000567704 OTOGQ6ZRI0 2925 aa6.84□□□□□ -1.31
CSPG4P13-202ENST00000567704 H0YAA0 97 aa6.8□□□□□ -1.32
CSPG4P13-202ENST00000567704 RPS29P62273 56 aaKnown RBP6.79□□□□□ -1.32
CSPG4P13-202ENST00000567704 C10orf95Q9H7T3 257 aa6.79□□□□□ -1.32
CSPG4P13-202ENST00000567704 Q5VSD8 79 aa6.77□□□□□ -1.33
CSPG4P13-202ENST00000567704 M0R2T5 61 aa6.76□□□□□ -1.33
CSPG4P13-202ENST00000567704 TGP01266 2768 aa6.75□□□□□ -1.33
CSPG4P13-202ENST00000567704 C20orf166-AS1Q96NR2 134 aa6.75□□□□□ -1.33
CSPG4P13-202ENST00000567704 NBPF19A0A087WUL8 3843 aa6.75□□□□□ -1.33
CSPG4P13-202ENST00000567704 SEC61BP60468 96 aaKnown RBP6.74□□□□□ -1.33
CSPG4P13-202ENST00000567704 TENM3Q9P273 2699 aa6.73□□□□□ -1.33
CSPG4P13-202ENST00000567704 CELSR1Q9NYQ6 3014 aa6.72□□□□□ -1.33
CSPG4P13-202ENST00000567704 PLAC4Q8WY50 150 aa6.72□□□□□ -1.33
CSPG4P13-202ENST00000567704 SPENQ96T58 3664 aaKnown RBP6.72□□□□□ -1.33
CSPG4P13-202ENST00000567704 CSMD1Q96PZ7 3565 aa6.68□□□□□ -1.34
CSPG4P13-202ENST00000567704 ANK3Q12955 4377 aaKnown RBP6.62□□□□□ -1.35
CSPG4P13-202ENST00000567704 TENM1Q9UKZ4 2725 aa6.61□□□□□ -1.35
CSPG4P13-202ENST00000567704 KRTAP1-4P0C5Y4 121 aa6.6□□□□□ -1.35
CSPG4P13-202ENST00000567704 KRTAP13-3Q3SY46 172 aa6.6□□□□□ -1.35
CSPG4P13-202ENST00000567704 P0C880 135 aa6.56□□□□□ -1.36
CSPG4P13-202ENST00000567704 CSMD2Q7Z408 3487 aa6.52□□□□□ -1.37
CSPG4P13-202ENST00000567704 ZFHX3Q15911 3703 aa6.51□□□□□ -1.37
CSPG4P13-202ENST00000567704 FBN1P35555 2871 aaKnown RBP6.51□□□□□ -1.37
CSPG4P13-202ENST00000567704 TNP1P09430 55 aa6.47□□□□□ -1.37
CSPG4P13-202ENST00000567704 CUBNO60494 3623 aa6.47□□□□□ -1.37
CSPG4P13-202ENST00000567704 PKD1L1Q8TDX9 2849 aa6.47□□□□□ -1.37
CSPG4P13-202ENST00000567704 KRTAP10-8P60410 259 aa6.45□□□□□ -1.38
CSPG4P13-202ENST00000567704 VWFP04275 2813 aa6.44□□□□□ -1.38
CSPG4P13-202ENST00000567704 PP632Q6XCG6 107 aa6.41□□□□□ -1.38
CSPG4P13-202ENST00000567704 SVEP1Q4LDE5 3571 aa6.41□□□□□ -1.38
CSPG4P13-202ENST00000567704 XP32Q5T750 250 aa6.4□□□□□ -1.38
CSPG4P13-202ENST00000567704 TENM2Q9NT68 2774 aa6.37□□□□□ -1.39
CSPG4P13-202ENST00000567704 AKAP9Q99996 3911 aa6.37□□□□□ -1.39
CSPG4P13-202ENST00000567704 TPRXLQ17RH7 258 aa6.33□□□□□ -1.4
CSPG4P13-202ENST00000567704 SRRM2Q9UQ35 2752 aaKnown RBP6.3□□□□□ -1.4
CSPG4P13-202ENST00000567704 KRTAP12-2P59991 146 aa6.29□□□□□ -1.4
CSPG4P13-202ENST00000567704 ZNF469Q96JG9 3925 aaPredicted RBP6.28□□□□□ -1.4
CSPG4P13-202ENST00000567704 FBN3Q75N90 2809 aa6.27□□□□□ -1.41
CSPG4P13-202ENST00000567704 TRRAPQ9Y4A5 3859 aa6.25□□□□□ -1.41
CSPG4P13-202ENST00000567704 KRTAP3-1Q9BYR8 98 aa6.24□□□□□ -1.41
CSPG4P13-202ENST00000567704 VPS13CQ709C8 3753 aa6.24□□□□□ -1.41
CSPG4P13-202ENST00000567704 KRTAP12-1P59990 96 aa6.18□□□□□ -1.42
CSPG4P13-202ENST00000567704 MEGF8Q7Z7M0 2845 aa6.17□□□□□ -1.42
CSPG4P13-202ENST00000567704 A0A1B0GVY2 172 aa6.17□□□□□ -1.42
CSPG4P13-202ENST00000567704 KRTAP13-4Q3LI77 160 aa6.14□□□□□ -1.43
CSPG4P13-202ENST00000567704 KRTAP10-6P60371 365 aaPredicted RBP6.09□□□□□ -1.43
CSPG4P13-202ENST00000567704 COL7A1Q02388 2944 aa6.06□□□□□ -1.44
CSPG4P13-202ENST00000567704 HUWE1Q7Z6Z7 4374 aaKnown RBP6.02□□□□□ -1.45
CSPG4P13-202ENST00000567704 KRTAP15-1Q3LI76 137 aa6□□□□□ -1.45
CSPG4P13-202ENST00000567704 DNAH9Q9NYC9 4486 aa5.92□□□□□ -1.46
CSPG4P13-202ENST00000567704 ANK2Q01484 3957 aa5.91□□□□□ -1.46
CSPG4P13-202ENST00000567704 KRTAP10-10P60014 251 aa5.9□□□□□ -1.47
CSPG4P13-202ENST00000567704 KRTAP3-2Q9BYR7 98 aa5.88□□□□□ -1.47
CSPG4P13-202ENST00000567704 ALMS1Q8TCU4 4167 aa5.85□□□□□ -1.47
CSPG4P13-202ENST00000567704 KRTAP3-3Q9BYR6 98 aa5.84□□□□□ -1.47
CSPG4P13-202ENST00000567704 DNHD1Q96M86 4753 aa5.82□□□□□ -1.48
CSPG4P13-202ENST00000567704 PRO2289Q9P1D8 64 aa5.73□□□□□ -1.49
CSPG4P13-202ENST00000567704 DNAH3Q8TD57 4116 aa5.7□□□□□ -1.5
CSPG4P13-202ENST00000567704 PRKDCP78527 4128 aaKnown RBP5.69□□□□□ -1.5
CSPG4P13-202ENST00000567704 CSMD3Q7Z407 3707 aa5.68□□□□□ -1.5
CSPG4P13-202ENST00000567704 CMYA5Q8N3K9 4069 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms