RNA–Protein interactions for RNA: ENST00000567400.1

GINS3-207, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-207ENST00000567400 LCE2BO14633 110 aa3.79□□□□□ -1.8
GINS3-207ENST00000567400 SCGB1C2P0DMR2 95 aa3.79□□□□□ -1.8
GINS3-207ENST00000567400 RBM3P98179 157 aaKnown RBP3.79□□□□□ -1.8
GINS3-207ENST00000567400 NAA38Q9BRA0 125 aaKnown RBP3.79□□□□□ -1.8
GINS3-207ENST00000567400 VPS25Q9BRG1 176 aa3.79□□□□□ -1.8
GINS3-207ENST00000567400 A0A1B0GVX0 72 aa3.78□□□□□ -1.8
GINS3-207ENST00000567400 BAALC-AS2P0C853 105 aa3.78□□□□□ -1.8
GINS3-207ENST00000567400 HRES1P13985 223 aa3.78□□□□□ -1.8
GINS3-207ENST00000567400 USH2AO75445 5202 aa3.78□□□□□ -1.8
GINS3-207ENST00000567400 DSCR8Q96T75 97 aa3.77□□□□□ -1.81
GINS3-207ENST00000567400 TRBV20-1A0A075B6N2 111 aa3.76□□□□□ -1.81
GINS3-207ENST00000567400 Q6ZQT0 140 aa3.76□□□□□ -1.81
GINS3-207ENST00000567400 C9JAW5 83 aa3.75□□□□□ -1.81
GINS3-207ENST00000567400 C8orf87E5RJ46 101 aa3.75□□□□□ -1.81
GINS3-207ENST00000567400 SSPOA2VEC9 5147 aa3.74□□□□□ -1.81
GINS3-207ENST00000567400 LOC110117498A0A087WWA1 95 aa3.74□□□□□ -1.81
GINS3-207ENST00000567400 M0R143 59 aa3.74□□□□□ -1.81
GINS3-207ENST00000567400 MT2AP02795 61 aa3.74□□□□□ -1.81
GINS3-207ENST00000567400 SMIM6P0DI80 62 aa3.74□□□□□ -1.81
GINS3-207ENST00000567400 ATXN8Q156A1 80 aa3.74□□□□□ -1.81
GINS3-207ENST00000567400 J3KT08 172 aa3.72□□□□□ -1.81
GINS3-207ENST00000567400 MT1FP04733 61 aa3.72□□□□□ -1.81
GINS3-207ENST00000567400 Q8N9P0 234 aaPredicted RBP3.72□□□□□ -1.81
GINS3-207ENST00000567400 ZCCHC13Q8WW36 166 aaKnown RBP3.72□□□□□ -1.81
GINS3-207ENST00000567400 C14orf132Q9NPU4 83 aa3.72□□□□□ -1.81
GINS3-207ENST00000567400 IGKV3D-7A0A0C4DH55 119 aa3.71□□□□□ -1.82
GINS3-207ENST00000567400 FAM236DA0A1B0GTK5 79 aa3.71□□□□□ -1.82
GINS3-207ENST00000567400 JMJD7-PLA2G4BH0Y9G9 81 aa3.71□□□□□ -1.82
GINS3-207ENST00000567400 FAM236CP0DP71 79 aa3.71□□□□□ -1.82
GINS3-207ENST00000567400 A0A1B0GW54 56 aa3.7□□□□□ -1.82
GINS3-207ENST00000567400 A8MWP4 228 aa3.7□□□□□ -1.82
GINS3-207ENST00000567400 SPINK7P58062 85 aa3.7□□□□□ -1.82
GINS3-207ENST00000567400 C8orf17Q9NRJ1 99 aa3.7□□□□□ -1.82
GINS3-207ENST00000567400 RBM12B-AS1Q9P1G2 102 aa3.7□□□□□ -1.82
GINS3-207ENST00000567400 KRTAP9-3Q9BYQ3 159 aa3.69□□□□□ -1.82
GINS3-207ENST00000567400 LOC105371267A0A1B0GV96 52 aa3.68□□□□□ -1.82
GINS3-207ENST00000567400 NDUFB1O75438 58 aa3.68□□□□□ -1.82
GINS3-207ENST00000567400 PDE6GP18545 87 aa3.68□□□□□ -1.82
GINS3-207ENST00000567400 BATFQ16520 125 aa3.68□□□□□ -1.82
GINS3-207ENST00000567400 MMP24-AS1A0A0U1RRL7 71 aa3.67□□□□□ -1.82
GINS3-207ENST00000567400 TSTD3H0UI37 97 aa3.67□□□□□ -1.82
GINS3-207ENST00000567400 Q6ZVQ6 151 aa3.67□□□□□ -1.82
GINS3-207ENST00000567400 PRR15Q8IV56 129 aa3.67□□□□□ -1.82
GINS3-207ENST00000567400 MTURNQ8N3F0 131 aa3.67□□□□□ -1.82
GINS3-207ENST00000567400 FCGBPQ9Y6R7 5405 aaPredicted RBP3.66□□□□□ -1.82
GINS3-207ENST00000567400 TAX1BP3O14907 124 aa3.66□□□□□ -1.82
GINS3-207ENST00000567400 C5orf47Q569G3 176 aa3.66□□□□□ -1.82
GINS3-207ENST00000567400 LYRM7Q5U5X0 104 aa3.66□□□□□ -1.82
GINS3-207ENST00000567400 C9orf118A6NHY6 69 aa3.65□□□□□ -1.83
GINS3-207ENST00000567400 NREPQ16612 68 aa3.65□□□□□ -1.83
GINS3-207ENST00000567400 WFDC13Q8IUB5 93 aa3.65□□□□□ -1.83
GINS3-207ENST00000567400 A0A1W2PPM0 123 aa3.64□□□□□ -1.83
GINS3-207ENST00000567400 H3BT86 120 aa3.64□□□□□ -1.83
GINS3-207ENST00000567400 K7EQZ3 153 aa3.64□□□□□ -1.83
GINS3-207ENST00000567400 KRTAP10-10P60014 251 aa3.64□□□□□ -1.83
GINS3-207ENST00000567400 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.63□□□□□ -1.83
GINS3-207ENST00000567400 MRPL34Q9BQ48 92 aaKnown RBP3.63□□□□□ -1.83
GINS3-207ENST00000567400 TMEM254Q8TBM7 123 aa3.62□□□□□ -1.83
GINS3-207ENST00000567400 hDV103S1A0JD37 113 aa3.61□□□□□ -1.83
GINS3-207ENST00000567400 KRTAP19-1Q8IUB9 90 aa3.61□□□□□ -1.83
GINS3-207ENST00000567400 Q5W150 140 aa3.6□□□□□ -1.83
GINS3-207ENST00000567400 Q8N9L7 120 aa3.6□□□□□ -1.83
GINS3-207ENST00000567400 BPY2O14599 106 aa3.58□□□□□ -1.84
GINS3-207ENST00000567400 PRO0461Q9UI25 63 aa3.58□□□□□ -1.84
GINS3-207ENST00000567400 SPCS1Q9Y6A9 102 aa3.58□□□□□ -1.84
GINS3-207ENST00000567400 KRTAP9-7A8MTY7 169 aa3.57□□□□□ -1.84
GINS3-207ENST00000567400 NDUFS5O43920 106 aa3.57□□□□□ -1.84
GINS3-207ENST00000567400 V9GYY9 64 aa3.57□□□□□ -1.84
GINS3-207ENST00000567400 IGKV2D-30A0A075B6S6 120 aa3.55□□□□□ -1.84
GINS3-207ENST00000567400 IGKV2-30P06310 120 aa3.55□□□□□ -1.84
GINS3-207ENST00000567400 H1FX-AS1Q4G0G2 97 aa3.55□□□□□ -1.84
GINS3-207ENST00000567400 LINC00846Q9NV44 126 aa3.55□□□□□ -1.84
GINS3-207ENST00000567400 CASC2Q6XLA1 102 aa3.54□□□□□ -1.84
GINS3-207ENST00000567400 C7orf65Q6ZTY9 151 aa3.54□□□□□ -1.84
GINS3-207ENST00000567400 HCG22E2RYF7 251 aa3.53□□□□□ -1.84
GINS3-207ENST00000567400 K7EP34 96 aa3.53□□□□□ -1.84
GINS3-207ENST00000567400 KRTAP19-6Q3LI70 58 aa3.53□□□□□ -1.84
GINS3-207ENST00000567400 C4orf26Q17RF5 130 aa3.52□□□□□ -1.85
GINS3-207ENST00000567400 COL5A1-AS1Q5SY13 56 aa3.52□□□□□ -1.85
GINS3-207ENST00000567400 LOC100996750A0A140TA64 210 aa3.51□□□□□ -1.85
GINS3-207ENST00000567400 KRTAP4-6Q9BYQ5 205 aa3.51□□□□□ -1.85
GINS3-207ENST00000567400 MACF1Q9UPN3 7388 aaKnown RBP3.51□□□□□ -1.85
GINS3-207ENST00000567400 KRTAP3-1Q9BYR8 98 aa3.5□□□□□ -1.85
GINS3-207ENST00000567400 UBL5Q9BZL1 73 aa3.5□□□□□ -1.85
GINS3-207ENST00000567400 CXCL6P80162 114 aa3.49□□□□□ -1.85
GINS3-207ENST00000567400 SYNE2Q8WXH0 6885 aaKnown RBP3.48□□□□□ -1.85
GINS3-207ENST00000567400 ETDBQ3ZM63 59 aa3.45□□□□□ -1.86
GINS3-207ENST00000567400 KRTAP23-1A1A580 65 aa3.44□□□□□ -1.86
GINS3-207ENST00000567400 F8W1H4 67 aa3.43□□□□□ -1.86
GINS3-207ENST00000567400 GTF2H5Q6ZYL4 71 aa3.43□□□□□ -1.86
GINS3-207ENST00000567400 LCA10Q71F78 164 aa3.43□□□□□ -1.86
GINS3-207ENST00000567400 C1orf64Q8NEQ6 169 aa3.42□□□□□ -1.86
GINS3-207ENST00000567400 S4R3F8 94 aa3.42□□□□□ -1.86
GINS3-207ENST00000567400 MT1BP07438 61 aa3.41□□□□□ -1.86
GINS3-207ENST00000567400 TP53AIP1Q9HCN2 124 aa3.41□□□□□ -1.86
GINS3-207ENST00000567400 A0A087WVE0 104 aa3.39□□□□□ -1.87
GINS3-207ENST00000567400 SPRR2GQ9BYE4 73 aa3.39□□□□□ -1.87
GINS3-207ENST00000567400 CYP4F30PQ9H0H9 118 aa3.39□□□□□ -1.87
GINS3-207ENST00000567400 FAM236AA0A1B0GUQ0 79 aa3.38□□□□□ -1.87
GINS3-207ENST00000567400 FAM236BA0A1B0GV22 79 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms