RNA–Protein interactions for RNA: ENST00000567298.5

KLHDC4-218, Transcript of kelch domain containing 4, humanhuman

TSL 5

Gene KLHDC4, Length 4,572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-218ENST00000567298 SMR3BP02814 79 aaPredicted RBP8.88□□□□□ -0.99
KLHDC4-218ENST00000567298 LAMA5O15230 3695 aa8.85□□□□□ -0.99
KLHDC4-218ENST00000567298 SPATA8Q6RVD6 105 aa8.85□□□□□ -0.99
KLHDC4-218ENST00000567298 WDFY3Q8IZQ1 3526 aa8.82□□□□□ -1
KLHDC4-218ENST00000567298 ASPMQ8IZT6 3477 aa8.8□□□□□ -1
KLHDC4-218ENST00000567298 KRTAP1-5Q9BYS1 174 aa8.78□□□□□ -1
KLHDC4-218ENST00000567298 A0A087X002 238 aa8.77□□□□□ -1.01
KLHDC4-218ENST00000567298 NOTCH2NLQ7Z3S9 236 aa8.77□□□□□ -1.01
KLHDC4-218ENST00000567298 ROMO1P60602 79 aa8.76□□□□□ -1.01
KLHDC4-218ENST00000567298 RPL37P61927 97 aaKnown RBP8.76□□□□□ -1.01
KLHDC4-218ENST00000567298 DMDP11532 3685 aa8.75□□□□□ -1.01
KLHDC4-218ENST00000567298 PLAC8Q9NZF1 115 aa8.73□□□□□ -1.01
KLHDC4-218ENST00000567298 A0A0A0MQY5 61 aa8.73□□□□□ -1.01
KLHDC4-218ENST00000567298 MXRA5Q9NR99 2828 aa8.72□□□□□ -1.01
KLHDC4-218ENST00000567298 H1FX-AS1Q4G0G2 97 aa8.71□□□□□ -1.02
KLHDC4-218ENST00000567298 KRTAP25-1Q3LHN0 102 aa8.68□□□□□ -1.02
KLHDC4-218ENST00000567298 COX6B2Q6YFQ2 88 aa8.67□□□□□ -1.02
KLHDC4-218ENST00000567298 CAMK2N1Q7Z7J9 78 aa8.65□□□□□ -1.02
KLHDC4-218ENST00000567298 PANO1I0J062 215 aa8.65□□□□□ -1.03
KLHDC4-218ENST00000567298 LINC00483Q53H64 154 aa8.64□□□□□ -1.03
KLHDC4-218ENST00000567298 KRTAP16-1A8MUX0 517 aa8.64□□□□□ -1.03
KLHDC4-218ENST00000567298 KRTAP7-1Q8IUC3 87 aa8.61□□□□□ -1.03
KLHDC4-218ENST00000567298 KRTAP11-1Q8IUC1 163 aa8.6□□□□□ -1.03
KLHDC4-218ENST00000567298 S4R3F8 94 aa8.57□□□□□ -1.04
KLHDC4-218ENST00000567298 NDUFAF8A1L188 74 aa8.56□□□□□ -1.04
KLHDC4-218ENST00000567298 ZFHX4Q86UP3 3567 aa8.55□□□□□ -1.04
KLHDC4-218ENST00000567298 Q6ZSA8 131 aa8.52□□□□□ -1.05
KLHDC4-218ENST00000567298 R4GN34 69 aa8.49□□□□□ -1.05
KLHDC4-218ENST00000567298 J3QL48 77 aa8.44□□□□□ -1.06
KLHDC4-218ENST00000567298 SMG1Q96Q15 3661 aaKnown RBP8.44□□□□□ -1.06
KLHDC4-218ENST00000567298 TENM1Q9UKZ4 2725 aa8.42□□□□□ -1.06
KLHDC4-218ENST00000567298 OTOGQ6ZRI0 2925 aa8.42□□□□□ -1.06
KLHDC4-218ENST00000567298 CELSR1Q9NYQ6 3014 aa8.41□□□□□ -1.06
KLHDC4-218ENST00000567298 A8MUU9 505 aa8.41□□□□□ -1.06
KLHDC4-218ENST00000567298 PKD1L1Q8TDX9 2849 aa8.4□□□□□ -1.06
KLHDC4-218ENST00000567298 TENM3Q9P273 2699 aa8.39□□□□□ -1.07
KLHDC4-218ENST00000567298 FBN1P35555 2871 aaKnown RBP8.39□□□□□ -1.07
KLHDC4-218ENST00000567298 M0QZ58 72 aa8.36□□□□□ -1.07
KLHDC4-218ENST00000567298 PDZD2O15018 2839 aa8.35□□□□□ -1.07
KLHDC4-218ENST00000567298 KRTAP10-2P60368 255 aa8.35□□□□□ -1.07
KLHDC4-218ENST00000567298 KRTAP13-1Q8IUC0 172 aa8.34□□□□□ -1.07
KLHDC4-218ENST00000567298 KRTAP10-1P60331 282 aa8.34□□□□□ -1.07
KLHDC4-218ENST00000567298 ZFHX3Q15911 3703 aa8.31□□□□□ -1.08
KLHDC4-218ENST00000567298 VWFP04275 2813 aa8.26□□□□□ -1.09
KLHDC4-218ENST00000567298 NBPF19A0A087WUL8 3843 aa8.23□□□□□ -1.09
KLHDC4-218ENST00000567298 KRTAP13-2Q52LG2 175 aa8.22□□□□□ -1.09
KLHDC4-218ENST00000567298 C20orf166-AS1Q96NR2 134 aa8.21□□□□□ -1.1
KLHDC4-218ENST00000567298 Q6ZRN7 208 aaPredicted RBP8.2□□□□□ -1.1
KLHDC4-218ENST00000567298 TENM2Q9NT68 2774 aa8.2□□□□□ -1.1
KLHDC4-218ENST00000567298 TGP01266 2768 aa8.19□□□□□ -1.1
KLHDC4-218ENST00000567298 C10orf95Q9H7T3 257 aa8.16□□□□□ -1.1
KLHDC4-218ENST00000567298 KRTAP21-3Q3LHN1 58 aa8.15□□□□□ -1.1
KLHDC4-218ENST00000567298 CSMD2Q7Z408 3487 aa8.15□□□□□ -1.11
KLHDC4-218ENST00000567298 H0YAA0 97 aa8.14□□□□□ -1.11
KLHDC4-218ENST00000567298 CSMD1Q96PZ7 3565 aa8.14□□□□□ -1.11
KLHDC4-218ENST00000567298 SVEP1Q4LDE5 3571 aa8.12□□□□□ -1.11
KLHDC4-218ENST00000567298 PLAC4Q8WY50 150 aa8.1□□□□□ -1.11
KLHDC4-218ENST00000567298 CUBNO60494 3623 aa8.1□□□□□ -1.11
KLHDC4-218ENST00000567298 Q5VSD8 79 aa8.08□□□□□ -1.12
KLHDC4-218ENST00000567298 M0R2T5 61 aa8.04□□□□□ -1.12
KLHDC4-218ENST00000567298 SPENQ96T58 3664 aaKnown RBP8.03□□□□□ -1.12
KLHDC4-218ENST00000567298 RPS29P62273 56 aaKnown RBP8.03□□□□□ -1.12
KLHDC4-218ENST00000567298 SEC61BP60468 96 aaKnown RBP7.99□□□□□ -1.13
KLHDC4-218ENST00000567298 SRRM2Q9UQ35 2752 aaKnown RBP7.95□□□□□ -1.14
KLHDC4-218ENST00000567298 P0C880 135 aa7.92□□□□□ -1.14
KLHDC4-218ENST00000567298 KRTAP13-3Q3SY46 172 aa7.84□□□□□ -1.15
KLHDC4-218ENST00000567298 BSNQ9UPA5 3926 aa7.8□□□□□ -1.16
KLHDC4-218ENST00000567298 KRTAP1-4P0C5Y4 121 aa7.78□□□□□ -1.16
KLHDC4-218ENST00000567298 TNP1P09430 55 aa7.76□□□□□ -1.17
KLHDC4-218ENST00000567298 KRTAP10-8P60410 259 aa7.76□□□□□ -1.17
KLHDC4-218ENST00000567298 TRRAPQ9Y4A5 3859 aa7.75□□□□□ -1.17
KLHDC4-218ENST00000567298 PP632Q6XCG6 107 aa7.71□□□□□ -1.17
KLHDC4-218ENST00000567298 ANK3Q12955 4377 aaKnown RBP7.63□□□□□ -1.19
KLHDC4-218ENST00000567298 FBN3Q75N90 2809 aa7.63□□□□□ -1.19
KLHDC4-218ENST00000567298 TPRXLQ17RH7 258 aa7.6□□□□□ -1.19
KLHDC4-218ENST00000567298 XP32Q5T750 250 aa7.56□□□□□ -1.2
KLHDC4-218ENST00000567298 COL7A1Q02388 2944 aa7.54□□□□□ -1.2
KLHDC4-218ENST00000567298 KRTAP12-2P59991 146 aa7.51□□□□□ -1.21
KLHDC4-218ENST00000567298 MEGF8Q7Z7M0 2845 aa7.46□□□□□ -1.22
KLHDC4-218ENST00000567298 KRTAP3-1Q9BYR8 98 aa7.4□□□□□ -1.22
KLHDC4-218ENST00000567298 VPS13CQ709C8 3753 aa7.39□□□□□ -1.23
KLHDC4-218ENST00000567298 KRTAP12-1P59990 96 aa7.38□□□□□ -1.23
KLHDC4-218ENST00000567298 ZNF469Q96JG9 3925 aaPredicted RBP7.37□□□□□ -1.23
KLHDC4-218ENST00000567298 A0A1B0GVY2 172 aa7.34□□□□□ -1.23
KLHDC4-218ENST00000567298 KRTAP13-4Q3LI77 160 aa7.31□□□□□ -1.24
KLHDC4-218ENST00000567298 KRTAP10-6P60371 365 aaPredicted RBP7.25□□□□□ -1.25
KLHDC4-218ENST00000567298 KRTAP15-1Q3LI76 137 aa7.22□□□□□ -1.25
KLHDC4-218ENST00000567298 AKAP9Q99996 3911 aa7.06□□□□□ -1.28
KLHDC4-218ENST00000567298 DNHD1Q96M86 4753 aa7.03□□□□□ -1.28
KLHDC4-218ENST00000567298 HUWE1Q7Z6Z7 4374 aaKnown RBP7□□□□□ -1.29
KLHDC4-218ENST00000567298 KRTAP10-10P60014 251 aa7□□□□□ -1.29
KLHDC4-218ENST00000567298 KRTAP3-2Q9BYR7 98 aa6.98□□□□□ -1.29
KLHDC4-218ENST00000567298 CSMD3Q7Z407 3707 aa6.97□□□□□ -1.29
KLHDC4-218ENST00000567298 KRTAP3-3Q9BYR6 98 aa6.91□□□□□ -1.3
KLHDC4-218ENST00000567298 DNAH9Q9NYC9 4486 aa6.83□□□□□ -1.32
KLHDC4-218ENST00000567298 PRO2289Q9P1D8 64 aa6.82□□□□□ -1.32
KLHDC4-218ENST00000567298 MT1HL1P0DM35 61 aa6.78□□□□□ -1.32
KLHDC4-218ENST00000567298 KRTAP4-5Q9BYR2 181 aa6.78□□□□□ -1.32
KLHDC4-218ENST00000567298 INE1O15225 51 aa6.75□□□□□ -1.33
KLHDC4-218ENST00000567298 KRTAP10-4P60372 401 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms