RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 KRTAP10-1P60331 282 aa14.01□□□□□ -0.17
LINC00543-201ENST00000567234 RYR3Q15413 4870 aa14.01□□□□□ -0.17
LINC00543-201ENST00000567234 LOC101927531A0A1B0GV80 90 aa14□□□□□ -0.17
LINC00543-201ENST00000567234 Q75L30 129 aa13.99□□□□□ -0.17
LINC00543-201ENST00000567234 H0Y9P7 68 aa13.99□□□□□ -0.17
LINC00543-201ENST00000567234 ATP11AUNQ6ZP68 121 aa13.99□□□□□ -0.17
LINC00543-201ENST00000567234 IGLV9-49A0A0B4J1Y8 123 aa13.97□□□□□ -0.17
LINC00543-201ENST00000567234 CASC2Q6XLA1 102 aa13.95□□□□□ -0.18
LINC00543-201ENST00000567234 A0A1B0GVY2 172 aa13.94□□□□□ -0.18
LINC00543-201ENST00000567234 KTN1-AS1Q86SY8 53 aa13.94□□□□□ -0.18
LINC00543-201ENST00000567234 PKHD1P08F94 4074 aa13.94□□□□□ -0.18
LINC00543-201ENST00000567234 PRR4Q16378 134 aa13.94□□□□□ -0.18
LINC00543-201ENST00000567234 WFDC13Q8IUB5 93 aa13.94□□□□□ -0.18
LINC00543-201ENST00000567234 A8MWP4 228 aa13.93□□□□□ -0.18
LINC00543-201ENST00000567234 CHKB-CPT1BH3BT56 60 aa13.93□□□□□ -0.18
LINC00543-201ENST00000567234 NDUFS5O43920 106 aa13.93□□□□□ -0.18
LINC00543-201ENST00000567234 IGLV7-46A0A075B6I9 117 aa13.9□□□□□ -0.18
LINC00543-201ENST00000567234 LINC00472Q9H8W2 130 aa13.89□□□□□ -0.19
LINC00543-201ENST00000567234 MOBPQ13875 183 aa13.87□□□□□ -0.19
LINC00543-201ENST00000567234 PRR15LQ9BU68 103 aa13.86□□□□□ -0.19
LINC00543-201ENST00000567234 DEFB116Q30KQ4 102 aa13.85□□□□□ -0.19
LINC00543-201ENST00000567234 ANAPC11Q9NYG5 84 aa13.85□□□□□ -0.19
LINC00543-201ENST00000567234 TP53AIP1Q9HCN2 124 aa13.84□□□□□ -0.19
LINC00543-201ENST00000567234 CDC42SE1Q9NRR8 79 aa13.82□□□□□ -0.2
LINC00543-201ENST00000567234 COA5Q86WW8 74 aa13.8□□□□□ -0.2
LINC00543-201ENST00000567234 LRP1BQ9NZR2 4599 aa13.79□□□□□ -0.2
LINC00543-201ENST00000567234 LINC01558Q9Y6Z2 57 aa13.78□□□□□ -0.2
LINC00543-201ENST00000567234 SSBP3-AS1Q7Z2R9 100 aa13.77□□□□□ -0.21
LINC00543-201ENST00000567234 DYNC1H1Q14204 4646 aaKnown RBP13.76□□□□□ -0.21
LINC00543-201ENST00000567234 A6NED7 52 aa13.74□□□□□ -0.21
LINC00543-201ENST00000567234 A6NN06 94 aa13.74□□□□□ -0.21
LINC00543-201ENST00000567234 Q96NJ1 140 aa13.74□□□□□ -0.21
LINC00543-201ENST00000567234 ASB16-AS1Q495Z4 193 aa13.74□□□□□ -0.21
LINC00543-201ENST00000567234 LCA10Q71F78 164 aa13.73□□□□□ -0.21
LINC00543-201ENST00000567234 MMP24-AS1A0A0U1RRL7 71 aa13.71□□□□□ -0.21
LINC00543-201ENST00000567234 A8MU10 97 aa13.65□□□□□ -0.22
LINC00543-201ENST00000567234 RBM12B-AS1Q9P1G2 102 aa13.64□□□□□ -0.23
LINC00543-201ENST00000567234 SPTSSBQ8NFR3 76 aa13.64□□□□□ -0.23
LINC00543-201ENST00000567234 C7orf65Q6ZTY9 151 aa13.63□□□□□ -0.23
LINC00543-201ENST00000567234 A0A087X002 238 aa13.61□□□□□ -0.23
LINC00543-201ENST00000567234 APOBP04114 4563 aaKnown RBP13.61□□□□□ -0.23
LINC00543-201ENST00000567234 KRTAP1-4P0C5Y4 121 aa13.6□□□□□ -0.23
LINC00543-201ENST00000567234 VPS13BQ7Z7G8 4022 aa13.6□□□□□ -0.23
LINC00543-201ENST00000567234 KRTAP13-2Q52LG2 175 aa13.6□□□□□ -0.23
LINC00543-201ENST00000567234 CDK2AP2O75956 126 aa13.56□□□□□ -0.24
LINC00543-201ENST00000567234 A0A1B0GVX0 72 aa13.55□□□□□ -0.24
LINC00543-201ENST00000567234 SPINK6Q6UWN8 80 aa13.55□□□□□ -0.24
LINC00543-201ENST00000567234 SMR3BP02814 79 aaPredicted RBP13.53□□□□□ -0.24
LINC00543-201ENST00000567234 EPPK1P58107 5090 aaKnown RBP13.53□□□□□ -0.24
LINC00543-201ENST00000567234 C8orf17Q9NRJ1 99 aa13.51□□□□□ -0.25
LINC00543-201ENST00000567234 PLA2G1BP04054 148 aaKnown RBP13.48□□□□□ -0.25
LINC00543-201ENST00000567234 IGHV6-1A0A0B4J1U7 121 aa13.46□□□□□ -0.25
LINC00543-201ENST00000567234 SPAG11AQ6PDA7 123 aa13.45□□□□□ -0.26
LINC00543-201ENST00000567234 HRES1P13985 223 aa13.44□□□□□ -0.26
LINC00543-201ENST00000567234 PCOTHQ58A44 107 aa13.43□□□□□ -0.26
LINC00543-201ENST00000567234 FAT1Q14517 4588 aa13.42□□□□□ -0.26
LINC00543-201ENST00000567234 TYMSOSQ8TAI1 123 aa13.4□□□□□ -0.26
LINC00543-201ENST00000567234 MRPL34Q9BQ48 92 aaKnown RBP13.4□□□□□ -0.26
LINC00543-201ENST00000567234 HSPG2P98160 4391 aa13.37□□□□□ -0.27
LINC00543-201ENST00000567234 C4orf48Q5BLP8 95 aa13.36□□□□□ -0.27
LINC00543-201ENST00000567234 C8orf87E5RJ46 101 aa13.35□□□□□ -0.27
LINC00543-201ENST00000567234 KRTAP10-4P60372 401 aaPredicted RBP13.35□□□□□ -0.27
LINC00543-201ENST00000567234 SPINK1P00995 79 aa13.34□□□□□ -0.27
LINC00543-201ENST00000567234 SPINK7P58062 85 aa13.34□□□□□ -0.27
LINC00543-201ENST00000567234 NOTCH2NLQ7Z3S9 236 aa13.32□□□□□ -0.28
LINC00543-201ENST00000567234 KIAA1109Q2LD37 5005 aa13.32□□□□□ -0.28
LINC00543-201ENST00000567234 KRTAP17-1Q9BYP8 105 aa13.31□□□□□ -0.28
LINC00543-201ENST00000567234 RYR1P21817 5038 aa13.29□□□□□ -0.28
LINC00543-201ENST00000567234 RPS29P62273 56 aaKnown RBP13.29□□□□□ -0.28
LINC00543-201ENST00000567234 ACYP2P14621 99 aa13.28□□□□□ -0.28
LINC00543-201ENST00000567234 PRR26Q8N8Z3 221 aa13.27□□□□□ -0.28
LINC00543-201ENST00000567234 LINC00304Q8N9R0 145 aa13.24□□□□□ -0.29
LINC00543-201ENST00000567234 LINC00313P59037 77 aa13.23□□□□□ -0.29
LINC00543-201ENST00000567234 KRTAP13-3Q3SY46 172 aa13.21□□□□□ -0.29
LINC00543-201ENST00000567234 Q5VSD8 79 aa13.2□□□□□ -0.3
LINC00543-201ENST00000567234 FAM229AH3BQW9 127 aa13.19□□□□□ -0.3
LINC00543-201ENST00000567234 DMAC1Q96GE9 116 aa13.16□□□□□ -0.3
LINC00543-201ENST00000567234 SPATA8Q6RVD6 105 aa13.12□□□□□ -0.31
LINC00543-201ENST00000567234 PKHD1L1Q86WI1 4243 aa13.09□□□□□ -0.31
LINC00543-201ENST00000567234 Q8N1X5 172 aa13.09□□□□□ -0.31
LINC00543-201ENST00000567234 KRTAP16-1A8MUX0 517 aa13.08□□□□□ -0.32
LINC00543-201ENST00000567234 Q5W150 140 aa13.03□□□□□ -0.32
LINC00543-201ENST00000567234 A0A1B0GU69 56 aa13.02□□□□□ -0.32
LINC00543-201ENST00000567234 BIRC6Q9NR09 4857 aa13□□□□□ -0.33
LINC00543-201ENST00000567234 KRTAP4-5Q9BYR2 181 aa12.98□□□□□ -0.33
LINC00543-201ENST00000567234 UQCR11O14957 56 aa12.96□□□□□ -0.33
LINC00543-201ENST00000567234 LINC01554Q52M75 96 aa12.95□□□□□ -0.34
LINC00543-201ENST00000567234 FLG2Q5D862 2391 aaPredicted RBP12.94□□□□□ -0.34
LINC00543-201ENST00000567234 LRP1Q07954 4544 aaKnown RBP12.93□□□□□ -0.34
LINC00543-201ENST00000567234 MIR22HGQ0VDD5 57 aa12.9□□□□□ -0.34
LINC00543-201ENST00000567234 IGKV2-30P06310 120 aa12.88□□□□□ -0.35
LINC00543-201ENST00000567234 KRTAP10-8P60410 259 aa12.86□□□□□ -0.35
LINC00543-201ENST00000567234 PRAC1Q96KF2 57 aa12.83□□□□□ -0.35
LINC00543-201ENST00000567234 RETNLBQ9BQ08 111 aa12.83□□□□□ -0.35
LINC00543-201ENST00000567234 MYCBP2O75592 4640 aa12.82□□□□□ -0.36
LINC00543-201ENST00000567234 HERC2O95714 4834 aa12.81□□□□□ -0.36
LINC00543-201ENST00000567234 FAT3Q8TDW7 4589 aa12.8□□□□□ -0.36
LINC00543-201ENST00000567234 TNXBP22105 4242 aa12.76□□□□□ -0.37
LINC00543-201ENST00000567234 C20orf166-AS1Q96NR2 134 aa12.73□□□□□ -0.37
LINC00543-201ENST00000567234 ABCA13Q86UQ4 5058 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms