RNA–Protein interactions for RNA: ENST00000567109.5

CDH13-209, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDH13, Length 8,042 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-209ENST00000567109 UTP20O75691 2785 aaKnown RBP3.68□□□□□ -1.82
CDH13-209ENST00000567109 UBR5O95071 2799 aaPredicted RBP3.68□□□□□ -1.82
CDH13-209ENST00000567109 ZZEF1O43149 2961 aa3.68□□□□□ -1.82
CDH13-209ENST00000567109 A8MUU9 505 aa3.67□□□□□ -1.82
CDH13-209ENST00000567109 Q8NDZ9 215 aa3.67□□□□□ -1.82
CDH13-209ENST00000567109 RPS29P62273 56 aaKnown RBP3.66□□□□□ -1.82
CDH13-209ENST00000567109 SPTBN5Q9NRC6 3674 aaKnown RBP3.66□□□□□ -1.82
CDH13-209ENST00000567109 FLNCQ14315 2725 aa3.65□□□□□ -1.83
CDH13-209ENST00000567109 ATMQ13315 3056 aa3.65□□□□□ -1.83
CDH13-209ENST00000567109 WDFY3Q8IZQ1 3526 aa3.64□□□□□ -1.83
CDH13-209ENST00000567109 ASPMQ8IZT6 3477 aa3.64□□□□□ -1.83
CDH13-209ENST00000567109 PANO1I0J062 215 aa3.64□□□□□ -1.83
CDH13-209ENST00000567109 NDUFAF8A1L188 74 aa3.62□□□□□ -1.83
CDH13-209ENST00000567109 TNRC18O15417 2968 aaPredicted RBP3.62□□□□□ -1.83
CDH13-209ENST00000567109 DMXL2Q8TDJ6 3036 aa3.61□□□□□ -1.83
CDH13-209ENST00000567109 KRTAP25-1Q3LHN0 102 aa3.59□□□□□ -1.83
CDH13-209ENST00000567109 TNP1P09430 55 aa3.59□□□□□ -1.83
CDH13-209ENST00000567109 ADGRG4Q8IZF6 3080 aa3.58□□□□□ -1.84
CDH13-209ENST00000567109 HERC1Q15751 4861 aa3.58□□□□□ -1.84
CDH13-209ENST00000567109 RYR1P21817 5038 aa3.57□□□□□ -1.84
CDH13-209ENST00000567109 LOC400499M0QZD8 3231 aa3.57□□□□□ -1.84
CDH13-209ENST00000567109 ZFHX4Q86UP3 3567 aa3.56□□□□□ -1.84
CDH13-209ENST00000567109 LAMA5O15230 3695 aa3.56□□□□□ -1.84
CDH13-209ENST00000567109 TENM1Q9UKZ4 2725 aa3.56□□□□□ -1.84
CDH13-209ENST00000567109 NBEAQ8NFP9 2946 aa3.56□□□□□ -1.84
CDH13-209ENST00000567109 BIRC6Q9NR09 4857 aa3.55□□□□□ -1.84
CDH13-209ENST00000567109 P0C880 135 aa3.55□□□□□ -1.84
CDH13-209ENST00000567109 DMXL1Q9Y485 3027 aa3.55□□□□□ -1.84
CDH13-209ENST00000567109 C10orf95Q9H7T3 257 aa3.55□□□□□ -1.84
CDH13-209ENST00000567109 KRTAP10-8P60410 259 aa3.54□□□□□ -1.84
CDH13-209ENST00000567109 MYO15AQ9UKN7 3530 aa3.54□□□□□ -1.84
CDH13-209ENST00000567109 EYSQ5T1H1 3165 aa3.52□□□□□ -1.85
CDH13-209ENST00000567109 PRO2289Q9P1D8 64 aa3.51□□□□□ -1.85
CDH13-209ENST00000567109 HIVEP1P15822 2718 aa3.51□□□□□ -1.85
CDH13-209ENST00000567109 DCHS1Q96JQ0 3298 aa3.51□□□□□ -1.85
CDH13-209ENST00000567109 CELSR1Q9NYQ6 3014 aa3.5□□□□□ -1.85
CDH13-209ENST00000567109 KRTAP13-1Q8IUC0 172 aa3.5□□□□□ -1.85
CDH13-209ENST00000567109 PP632Q6XCG6 107 aa3.49□□□□□ -1.85
CDH13-209ENST00000567109 A0A1B0GVY2 172 aa3.49□□□□□ -1.85
CDH13-209ENST00000567109 TACC2O95359 2948 aa3.48□□□□□ -1.85
CDH13-209ENST00000567109 ZFHX3Q15911 3703 aa3.47□□□□□ -1.85
CDH13-209ENST00000567109 KRTAP7-1Q8IUC3 87 aa3.47□□□□□ -1.85
CDH13-209ENST00000567109 NF1P21359 2839 aa3.46□□□□□ -1.85
CDH13-209ENST00000567109 A8MU10 97 aa3.46□□□□□ -1.86
CDH13-209ENST00000567109 KRTAP11-1Q8IUC1 163 aa3.45□□□□□ -1.86
CDH13-209ENST00000567109 CELSR2Q9HCU4 2923 aa3.45□□□□□ -1.86
CDH13-209ENST00000567109 ZANQ9Y493 2812 aa3.45□□□□□ -1.86
CDH13-209ENST00000567109 KRTAP10-10P60014 251 aa3.45□□□□□ -1.86
CDH13-209ENST00000567109 SPENQ96T58 3664 aaKnown RBP3.44□□□□□ -1.86
CDH13-209ENST00000567109 RELNP78509 3460 aa3.43□□□□□ -1.86
CDH13-209ENST00000567109 PCLOQ9Y6V0 5065 aa3.43□□□□□ -1.86
CDH13-209ENST00000567109 RYR2Q92736 4967 aa3.42□□□□□ -1.86
CDH13-209ENST00000567109 TENM3Q9P273 2699 aa3.42□□□□□ -1.86
CDH13-209ENST00000567109 TGP01266 2768 aa3.39□□□□□ -1.87
CDH13-209ENST00000567109 MXRA5Q9NR99 2828 aa3.39□□□□□ -1.87
CDH13-209ENST00000567109 MUC3AQ02505 3323 aa3.38□□□□□ -1.87
CDH13-209ENST00000567109 KRTAP13-2Q52LG2 175 aa3.38□□□□□ -1.87
CDH13-209ENST00000567109 DMDP11532 3685 aa3.37□□□□□ -1.87
CDH13-209ENST00000567109 DCHS2Q6V1P9 2916 aa3.37□□□□□ -1.87
CDH13-209ENST00000567109 PDZD2O15018 2839 aa3.37□□□□□ -1.87
CDH13-209ENST00000567109 KRTAP1-4P0C5Y4 121 aa3.36□□□□□ -1.87
CDH13-209ENST00000567109 HRNRQ86YZ3 2850 aaPredicted RBP3.35□□□□□ -1.87
CDH13-209ENST00000567109 CSMD1Q96PZ7 3565 aa3.35□□□□□ -1.87
CDH13-209ENST00000567109 SMG1Q96Q15 3661 aaKnown RBP3.33□□□□□ -1.88
CDH13-209ENST00000567109 TENM2Q9NT68 2774 aa3.33□□□□□ -1.88
CDH13-209ENST00000567109 KRTAP13-3Q3SY46 172 aa3.31□□□□□ -1.88
CDH13-209ENST00000567109 TPRXLQ17RH7 258 aa3.31□□□□□ -1.88
CDH13-209ENST00000567109 XP32Q5T750 250 aa3.31□□□□□ -1.88
CDH13-209ENST00000567109 FBN2P35556 2912 aa3.31□□□□□ -1.88
CDH13-209ENST00000567109 VWFP04275 2813 aa3.29□□□□□ -1.88
CDH13-209ENST00000567109 KMT2CQ8NEZ4 4911 aaKnown RBP3.29□□□□□ -1.88
CDH13-209ENST00000567109 PKD1L1Q8TDX9 2849 aa3.28□□□□□ -1.88
CDH13-209ENST00000567109 DNHD1Q96M86 4753 aa3.28□□□□□ -1.88
CDH13-209ENST00000567109 H0YAA0 97 aa3.27□□□□□ -1.89
CDH13-209ENST00000567109 TENM4Q6N022 2769 aa3.27□□□□□ -1.89
CDH13-209ENST00000567109 HERC2O95714 4834 aa3.25□□□□□ -1.89
CDH13-209ENST00000567109 FBN3Q75N90 2809 aa3.25□□□□□ -1.89
CDH13-209ENST00000567109 KIAA1109Q2LD37 5005 aa3.24□□□□□ -1.89
CDH13-209ENST00000567109 DNAH11Q96DT5 4516 aa3.22□□□□□ -1.89
CDH13-209ENST00000567109 COL7A1Q02388 2944 aa3.22□□□□□ -1.89
CDH13-209ENST00000567109 RYR3Q15413 4870 aa3.22□□□□□ -1.89
CDH13-209ENST00000567109 MEGF8Q7Z7M0 2845 aa3.2□□□□□ -1.9
CDH13-209ENST00000567109 PLECQ15149 4684 aaKnown RBP3.2□□□□□ -1.9
CDH13-209ENST00000567109 LRP1BQ9NZR2 4599 aa3.19□□□□□ -1.9
CDH13-209ENST00000567109 ABCA13Q86UQ4 5058 aa3.19□□□□□ -1.9
CDH13-209ENST00000567109 VPS13CQ709C8 3753 aa3.19□□□□□ -1.9
CDH13-209ENST00000567109 HYDINQ4G0P3 5121 aa3.19□□□□□ -1.9
CDH13-209ENST00000567109 OTOGQ6ZRI0 2925 aa3.19□□□□□ -1.9
CDH13-209ENST00000567109 KRTAP10-4P60372 401 aaPredicted RBP3.17□□□□□ -1.9
CDH13-209ENST00000567109 DNAH10Q8IVF4 4471 aa3.16□□□□□ -1.9
CDH13-209ENST00000567109 CSMD2Q7Z408 3487 aa3.16□□□□□ -1.9
CDH13-209ENST00000567109 DYNC1H1Q14204 4646 aaKnown RBP3.15□□□□□ -1.91
CDH13-209ENST00000567109 DNAH3Q8TD57 4116 aa3.15□□□□□ -1.91
CDH13-209ENST00000567109 KRTAP23-1A1A580 65 aa3.15□□□□□ -1.91
CDH13-209ENST00000567109 CUBNO60494 3623 aa3.14□□□□□ -1.91
CDH13-209ENST00000567109 SRRM2Q9UQ35 2752 aaKnown RBP3.13□□□□□ -1.91
CDH13-209ENST00000567109 BSNQ9UPA5 3926 aa3.13□□□□□ -1.91
CDH13-209ENST00000567109 MT1HL1P0DM35 61 aa3.12□□□□□ -1.91
CDH13-209ENST00000567109 AKAP9Q99996 3911 aa3.12□□□□□ -1.91
CDH13-209ENST00000567109 ANK3Q12955 4377 aaKnown RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms