RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 VPS25Q9BRG1 176 aa7.28□□□□□ -1.24
COMMD4-216ENST00000567023 C21orf62-AS1Q17RA5 79 aa7.27□□□□□ -1.25
COMMD4-216ENST00000567023 Q6ZQT0 140 aa7.27□□□□□ -1.25
COMMD4-216ENST00000567023 A0A1B0GW54 56 aa7.26□□□□□ -1.25
COMMD4-216ENST00000567023 H3BT86 120 aa7.26□□□□□ -1.25
COMMD4-216ENST00000567023 IGKV4-1P06312 121 aa7.26□□□□□ -1.25
COMMD4-216ENST00000567023 PDE6GP18545 87 aa7.26□□□□□ -1.25
COMMD4-216ENST00000567023 LINC00313P59037 77 aa7.26□□□□□ -1.25
COMMD4-216ENST00000567023 SIGMAR1Q99720 223 aa7.26□□□□□ -1.25
COMMD4-216ENST00000567023 KRTAP16-1A8MUX0 517 aa7.25□□□□□ -1.25
COMMD4-216ENST00000567023 COL5A1-AS1Q5SY13 56 aa7.25□□□□□ -1.25
COMMD4-216ENST00000567023 DEFB116Q30KQ4 102 aa7.23□□□□□ -1.25
COMMD4-216ENST00000567023 C14orf132Q9NPU4 83 aa7.23□□□□□ -1.25
COMMD4-216ENST00000567023 KRTAP9-8Q9BYQ0 159 aa7.22□□□□□ -1.25
COMMD4-216ENST00000567023 SPCS1Q9Y6A9 102 aa7.22□□□□□ -1.25
COMMD4-216ENST00000567023 NOTCH2NLQ7Z3S9 236 aa7.2□□□□□ -1.26
COMMD4-216ENST00000567023 MTURNQ8N3F0 131 aa7.2□□□□□ -1.26
COMMD4-216ENST00000567023 J3KT08 172 aa7.18□□□□□ -1.26
COMMD4-216ENST00000567023 MPLKIPQ8TAP9 179 aa7.17□□□□□ -1.26
COMMD4-216ENST00000567023 IGHV6-1A0A0B4J1U7 121 aa7.16□□□□□ -1.26
COMMD4-216ENST00000567023 A0A1B0GVX0 72 aa7.16□□□□□ -1.26
COMMD4-216ENST00000567023 SMCPP49901 116 aaPredicted RBP7.16□□□□□ -1.26
COMMD4-216ENST00000567023 PCP4L1A6NKN8 68 aa7.15□□□□□ -1.26
COMMD4-216ENST00000567023 K7EP34 96 aa7.15□□□□□ -1.26
COMMD4-216ENST00000567023 PRO0461Q9UI25 63 aa7.15□□□□□ -1.26
COMMD4-216ENST00000567023 C8orf87E5RJ46 101 aa7.14□□□□□ -1.27
COMMD4-216ENST00000567023 USH2AO75445 5202 aa7.13□□□□□ -1.27
COMMD4-216ENST00000567023 HRES1P13985 223 aa7.13□□□□□ -1.27
COMMD4-216ENST00000567023 RBM12B-AS1Q9P1G2 102 aa7.12□□□□□ -1.27
COMMD4-216ENST00000567023 FAM236DA0A1B0GTK5 79 aa7.11□□□□□ -1.27
COMMD4-216ENST00000567023 FAM236CP0DP71 79 aa7.11□□□□□ -1.27
COMMD4-216ENST00000567023 A8MWP4 228 aa7.1□□□□□ -1.27
COMMD4-216ENST00000567023 NDUFB1O75438 58 aa7.1□□□□□ -1.27
COMMD4-216ENST00000567023 NREPQ16612 68 aa7.1□□□□□ -1.27
COMMD4-216ENST00000567023 SSPOA2VEC9 5147 aa7.09□□□□□ -1.27
COMMD4-216ENST00000567023 IGKV3D-7A0A0C4DH55 119 aa7.08□□□□□ -1.28
COMMD4-216ENST00000567023 MT2AP02795 61 aa7.07□□□□□ -1.28
COMMD4-216ENST00000567023 GTF2H5Q6ZYL4 71 aa7.07□□□□□ -1.28
COMMD4-216ENST00000567023 PRR15Q8IV56 129 aa7.05□□□□□ -1.28
COMMD4-216ENST00000567023 C8orf17Q9NRJ1 99 aa7.05□□□□□ -1.28
COMMD4-216ENST00000567023 Q8N9P0 234 aaPredicted RBP7.04□□□□□ -1.28
COMMD4-216ENST00000567023 ZCCHC13Q8WW36 166 aaKnown RBP7.04□□□□□ -1.28
COMMD4-216ENST00000567023 F8W1H4 67 aa7.02□□□□□ -1.29
COMMD4-216ENST00000567023 MT1FP04733 61 aa7.02□□□□□ -1.29
COMMD4-216ENST00000567023 SPINK7P58062 85 aa7.01□□□□□ -1.29
COMMD4-216ENST00000567023 Q6ZVQ6 151 aa7.01□□□□□ -1.29
COMMD4-216ENST00000567023 MMP24-AS1A0A0U1RRL7 71 aa6.99□□□□□ -1.29
COMMD4-216ENST00000567023 K7EQZ3 153 aa6.99□□□□□ -1.29
COMMD4-216ENST00000567023 BPY2O14599 106 aa6.99□□□□□ -1.29
COMMD4-216ENST00000567023 KRTAP9-3Q9BYQ3 159 aa6.99□□□□□ -1.29
COMMD4-216ENST00000567023 LCE2BO14633 110 aa6.98□□□□□ -1.29
COMMD4-216ENST00000567023 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.97□□□□□ -1.29
COMMD4-216ENST00000567023 KRTAP10-10P60014 251 aa6.97□□□□□ -1.29
COMMD4-216ENST00000567023 LINC00846Q9NV44 126 aa6.97□□□□□ -1.29
COMMD4-216ENST00000567023 TMEM254Q8TBM7 123 aa6.96□□□□□ -1.3
COMMD4-216ENST00000567023 ETDBQ3ZM63 59 aa6.95□□□□□ -1.3
COMMD4-216ENST00000567023 FCGBPQ9Y6R7 5405 aaPredicted RBP6.95□□□□□ -1.3
COMMD4-216ENST00000567023 MRPL34Q9BQ48 92 aaKnown RBP6.94□□□□□ -1.3
COMMD4-216ENST00000567023 hDV103S1A0JD37 113 aa6.93□□□□□ -1.3
COMMD4-216ENST00000567023 UBL5Q9BZL1 73 aa6.93□□□□□ -1.3
COMMD4-216ENST00000567023 KRTAP9-7A8MTY7 169 aa6.91□□□□□ -1.3
COMMD4-216ENST00000567023 Q8N9L7 120 aa6.91□□□□□ -1.3
COMMD4-216ENST00000567023 WFDC13Q8IUB5 93 aa6.89□□□□□ -1.31
COMMD4-216ENST00000567023 KRTAP19-1Q8IUB9 90 aa6.89□□□□□ -1.31
COMMD4-216ENST00000567023 CASC2Q6XLA1 102 aa6.85□□□□□ -1.31
COMMD4-216ENST00000567023 NDUFS5O43920 106 aa6.83□□□□□ -1.32
COMMD4-216ENST00000567023 CXCL6P80162 114 aa6.83□□□□□ -1.32
COMMD4-216ENST00000567023 HCG22E2RYF7 251 aa6.81□□□□□ -1.32
COMMD4-216ENST00000567023 FAM240AA0A1B0GVK7 77 aa6.8□□□□□ -1.32
COMMD4-216ENST00000567023 ACYP1P07311 99 aa6.8□□□□□ -1.32
COMMD4-216ENST00000567023 Q5W150 140 aa6.8□□□□□ -1.32
COMMD4-216ENST00000567023 A0A1B0GV90 55 aa6.79□□□□□ -1.32
COMMD4-216ENST00000567023 MACF1Q9UPN3 7388 aaKnown RBP6.77□□□□□ -1.33
COMMD4-216ENST00000567023 H1FX-AS1Q4G0G2 97 aa6.77□□□□□ -1.33
COMMD4-216ENST00000567023 KRTAP19-6Q3LI70 58 aa6.76□□□□□ -1.33
COMMD4-216ENST00000567023 C7orf65Q6ZTY9 151 aa6.72□□□□□ -1.33
COMMD4-216ENST00000567023 IGKV2D-30A0A075B6S6 120 aa6.71□□□□□ -1.34
COMMD4-216ENST00000567023 IGKV2-30P06310 120 aa6.71□□□□□ -1.34
COMMD4-216ENST00000567023 ATP5EP2Q5VTU8 51 aa6.71□□□□□ -1.34
COMMD4-216ENST00000567023 SYNE2Q8WXH0 6885 aaKnown RBP6.7□□□□□ -1.34
COMMD4-216ENST00000567023 TP53AIP1Q9HCN2 124 aa6.69□□□□□ -1.34
COMMD4-216ENST00000567023 LINC00643Q86TS7 51 aa6.65□□□□□ -1.34
COMMD4-216ENST00000567023 C4orf26Q17RF5 130 aa6.61□□□□□ -1.35
COMMD4-216ENST00000567023 HIST1H4AP62805 103 aaKnown RBP6.6□□□□□ -1.35
COMMD4-216ENST00000567023 J3QR89 54 aa6.57□□□□□ -1.36
COMMD4-216ENST00000567023 A0A087WVE0 104 aa6.56□□□□□ -1.36
COMMD4-216ENST00000567023 TRAV22A0A0B4J277 110 aa6.54□□□□□ -1.36
COMMD4-216ENST00000567023 KRTAP3-1Q9BYR8 98 aa6.54□□□□□ -1.36
COMMD4-216ENST00000567023 CYP4F30PQ9H0H9 118 aa6.53□□□□□ -1.36
COMMD4-216ENST00000567023 UQCRQO14949 82 aa6.52□□□□□ -1.37
COMMD4-216ENST00000567023 LOC101927531A0A1B0GV80 90 aa6.51□□□□□ -1.37
COMMD4-216ENST00000567023 C5orf47Q569G3 176 aa6.51□□□□□ -1.37
COMMD4-216ENST00000567023 KRTAP6-3Q3LI67 103 aa6.5□□□□□ -1.37
COMMD4-216ENST00000567023 C1orf64Q8NEQ6 169 aa6.49□□□□□ -1.37
COMMD4-216ENST00000567023 S4R3F8 94 aa6.48□□□□□ -1.37
COMMD4-216ENST00000567023 ATOX1O00244 68 aa6.47□□□□□ -1.37
COMMD4-216ENST00000567023 CSAG1Q6PB30 78 aa6.47□□□□□ -1.37
COMMD4-216ENST00000567023 H0Y9P7 68 aa6.46□□□□□ -1.38
COMMD4-216ENST00000567023 OCR1Q9BZK8 76 aa6.46□□□□□ -1.38
COMMD4-216ENST00000567023 FAM236AA0A1B0GUQ0 79 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms