RNA–Protein interactions for RNA: ENST00000566808.2

CDH3-205, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-205ENST00000566808 SNRPEP62304 92 aaKnown RBP7.56□□□□□ -1.2
CDH3-205ENST00000566808 TRACP01848 142 aa7.55□□□□□ -1.2
CDH3-205ENST00000566808 DSCR8Q96T75 97 aa7.54□□□□□ -1.2
CDH3-205ENST00000566808 LYRM7Q5U5X0 104 aa7.53□□□□□ -1.2
CDH3-205ENST00000566808 FAM236AA0A1B0GUQ0 79 aa7.52□□□□□ -1.21
CDH3-205ENST00000566808 FAM236BA0A1B0GV22 79 aa7.52□□□□□ -1.21
CDH3-205ENST00000566808 A0A1B0GX51 115 aa7.52□□□□□ -1.21
CDH3-205ENST00000566808 CCKP06307 115 aa7.52□□□□□ -1.21
CDH3-205ENST00000566808 SPRR2GQ9BYE4 73 aa7.52□□□□□ -1.21
CDH3-205ENST00000566808 S100A6P06703 90 aa7.5□□□□□ -1.21
CDH3-205ENST00000566808 SPRR2FQ96RM1 72 aa7.5□□□□□ -1.21
CDH3-205ENST00000566808 A0A1B0GV72 72 aa7.49□□□□□ -1.21
CDH3-205ENST00000566808 IGKV3D-7A0A0C4DH55 119 aa7.48□□□□□ -1.21
CDH3-205ENST00000566808 HIST1H4GQ99525 98 aa7.48□□□□□ -1.21
CDH3-205ENST00000566808 J3KT08 172 aa7.47□□□□□ -1.21
CDH3-205ENST00000566808 TMA7Q9Y2S6 64 aaKnown RBP7.47□□□□□ -1.21
CDH3-205ENST00000566808 COA6Q5JTJ3 125 aaKnown RBP7.46□□□□□ -1.22
CDH3-205ENST00000566808 GPR98Q8WXG9 6306 aa7.43□□□□□ -1.22
CDH3-205ENST00000566808 HSBP1L1C9JCN9 74 aa7.42□□□□□ -1.22
CDH3-205ENST00000566808 NDUFB1O75438 58 aa7.41□□□□□ -1.22
CDH3-205ENST00000566808 IMUPQ9GZP8 106 aa7.41□□□□□ -1.22
CDH3-205ENST00000566808 A0A0B4J2C4 111 aa7.4□□□□□ -1.22
CDH3-205ENST00000566808 H3BQ85 93 aa7.4□□□□□ -1.22
CDH3-205ENST00000566808 C8orf17Q9NRJ1 99 aa7.4□□□□□ -1.22
CDH3-205ENST00000566808 ORMDL1Q9P0S3 153 aa7.4□□□□□ -1.22
CDH3-205ENST00000566808 DNAL4O96015 105 aa7.38□□□□□ -1.23
CDH3-205ENST00000566808 VPS25Q9BRG1 176 aa7.38□□□□□ -1.23
CDH3-205ENST00000566808 C5orf47Q569G3 176 aa7.36□□□□□ -1.23
CDH3-205ENST00000566808 LCE1AQ5T7P2 110 aa7.36□□□□□ -1.23
CDH3-205ENST00000566808 TMEM256-PLSCR3K7ERE1 68 aa7.35□□□□□ -1.23
CDH3-205ENST00000566808 Q6ZVQ6 151 aa7.34□□□□□ -1.23
CDH3-205ENST00000566808 C21orf62-AS1Q17RA5 79 aa7.33□□□□□ -1.24
CDH3-205ENST00000566808 SPRR2DP22532 72 aa7.32□□□□□ -1.24
CDH3-205ENST00000566808 C2orf91Q6ZV80 131 aa7.31□□□□□ -1.24
CDH3-205ENST00000566808 TRIAP1O43715 76 aa7.3□□□□□ -1.24
CDH3-205ENST00000566808 UBE2V1Q13404 147 aa7.29□□□□□ -1.24
CDH3-205ENST00000566808 C7orf65Q6ZTY9 151 aa7.29□□□□□ -1.24
CDH3-205ENST00000566808 SVIPQ8NHG7 77 aa7.29□□□□□ -1.24
CDH3-205ENST00000566808 IGKV2D-30A0A075B6S6 120 aa7.28□□□□□ -1.24
CDH3-205ENST00000566808 IGKV2-30P06310 120 aa7.28□□□□□ -1.24
CDH3-205ENST00000566808 SMCPP49901 116 aaPredicted RBP7.28□□□□□ -1.24
CDH3-205ENST00000566808 COX8AP10176 69 aa7.27□□□□□ -1.25
CDH3-205ENST00000566808 KLKP1Q107X0 134 aa7.27□□□□□ -1.25
CDH3-205ENST00000566808 PRO1854Q9UHT4 67 aa7.27□□□□□ -1.25
CDH3-205ENST00000566808 Q6ZQT0 140 aa7.26□□□□□ -1.25
CDH3-205ENST00000566808 RBM3P98179 157 aaKnown RBP7.24□□□□□ -1.25
CDH3-205ENST00000566808 KRTAP8-1Q8IUC2 63 aa7.24□□□□□ -1.25
CDH3-205ENST00000566808 MRPL34Q9BQ48 92 aaKnown RBP7.24□□□□□ -1.25
CDH3-205ENST00000566808 DLEU1O43261 78 aa7.23□□□□□ -1.25
CDH3-205ENST00000566808 CSAG1Q6PB30 78 aa7.23□□□□□ -1.25
CDH3-205ENST00000566808 TMEM254Q8TBM7 123 aa7.23□□□□□ -1.25
CDH3-205ENST00000566808 PCP4L1A6NKN8 68 aa7.22□□□□□ -1.25
CDH3-205ENST00000566808 C4orf26Q17RF5 130 aa7.22□□□□□ -1.25
CDH3-205ENST00000566808 TMEM238LA0A1B0GVL6 79 aa7.21□□□□□ -1.26
CDH3-205ENST00000566808 A6NJY4 79 aa7.21□□□□□ -1.26
CDH3-205ENST00000566808 S4R3F8 94 aa7.21□□□□□ -1.26
CDH3-205ENST00000566808 HIGD1BQ9P298 99 aa7.2□□□□□ -1.26
CDH3-205ENST00000566808 MMP24-AS1A0A0U1RRL7 71 aa7.19□□□□□ -1.26
CDH3-205ENST00000566808 PRR15Q8IV56 129 aa7.19□□□□□ -1.26
CDH3-205ENST00000566808 NDUFS5O43920 106 aa7.18□□□□□ -1.26
CDH3-205ENST00000566808 C9JAW5 83 aa7.17□□□□□ -1.26
CDH3-205ENST00000566808 LCE3BQ5TA77 95 aa7.17□□□□□ -1.26
CDH3-205ENST00000566808 HIST1H2BLQ99880 126 aa7.17□□□□□ -1.26
CDH3-205ENST00000566808 CEND1Q8N111 149 aa7.15□□□□□ -1.26
CDH3-205ENST00000566808 PSMB2P49721 201 aa7.14□□□□□ -1.27
CDH3-205ENST00000566808 HIST3H2BBQ8N257 126 aa7.14□□□□□ -1.27
CDH3-205ENST00000566808 CRIPTQ9P021 101 aa7.14□□□□□ -1.27
CDH3-205ENST00000566808 PRO2289Q9P1D8 64 aa7.14□□□□□ -1.27
CDH3-205ENST00000566808 COX6CP09669 75 aa7.13□□□□□ -1.27
CDH3-205ENST00000566808 S100A2P29034 98 aa7.13□□□□□ -1.27
CDH3-205ENST00000566808 LCA10Q71F78 164 aa7.13□□□□□ -1.27
CDH3-205ENST00000566808 hDV103S1A0JD37 113 aa7.12□□□□□ -1.27
CDH3-205ENST00000566808 FXYD2P54710 66 aa7.11□□□□□ -1.27
CDH3-205ENST00000566808 Q5W150 140 aa7.11□□□□□ -1.27
CDH3-205ENST00000566808 A0A1B0GW54 56 aa7.1□□□□□ -1.27
CDH3-205ENST00000566808 C14orf144Q96I85 54 aa7.1□□□□□ -1.27
CDH3-205ENST00000566808 KRTAP3-1Q9BYR8 98 aa7.08□□□□□ -1.28
CDH3-205ENST00000566808 SMIM6P0DI80 62 aa7.07□□□□□ -1.28
CDH3-205ENST00000566808 MT1XP80297 61 aa7.05□□□□□ -1.28
CDH3-205ENST00000566808 KRTAP12-2P59991 146 aa7.04□□□□□ -1.28
CDH3-205ENST00000566808 K7EQZ3 153 aa7.03□□□□□ -1.28
CDH3-205ENST00000566808 DSTQ03001 7570 aaKnown RBP7.02□□□□□ -1.29
CDH3-205ENST00000566808 K7ERJ3 54 aa7.01□□□□□ -1.29
CDH3-205ENST00000566808 PCP4P48539 62 aa7.01□□□□□ -1.29
CDH3-205ENST00000566808 LOC110117498A0A087WWA1 95 aa7□□□□□ -1.29
CDH3-205ENST00000566808 SPATA45Q537H7 98 aa6.99□□□□□ -1.29
CDH3-205ENST00000566808 C1orf64Q8NEQ6 169 aa6.99□□□□□ -1.29
CDH3-205ENST00000566808 PAM16Q9Y3D7 125 aa6.99□□□□□ -1.29
CDH3-205ENST00000566808 BAALC-AS2P0C853 105 aa6.98□□□□□ -1.29
CDH3-205ENST00000566808 NREPQ16612 68 aa6.98□□□□□ -1.29
CDH3-205ENST00000566808 JMJD7-PLA2G4BH0Y9G9 81 aa6.95□□□□□ -1.3
CDH3-205ENST00000566808 PDE6GP18545 87 aa6.95□□□□□ -1.3
CDH3-205ENST00000566808 KRTAP3-3Q9BYR6 98 aa6.94□□□□□ -1.3
CDH3-205ENST00000566808 KRTAP4-8A0A0G2JLE6 195 aa6.93□□□□□ -1.3
CDH3-205ENST00000566808 KRTAP4-8Q9BYQ9 185 aa6.93□□□□□ -1.3
CDH3-205ENST00000566808 HCG22E2RYF7 251 aa6.92□□□□□ -1.3
CDH3-205ENST00000566808 CXCL6P80162 114 aa6.91□□□□□ -1.3
CDH3-205ENST00000566808 SCGB1C2P0DMR2 95 aa6.9□□□□□ -1.3
CDH3-205ENST00000566808 VAMP8Q9BV40 100 aa6.9□□□□□ -1.3
CDH3-205ENST00000566808 HSD52Q0P140 79 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms