RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 Q75L30 129 aa14.01□□□□□ -0.17
NME3-209ENST00000566600 NREPQ16612 68 aa13.98□□□□□ -0.17
NME3-209ENST00000566600 IGHV6-1A0A0B4J1U7 121 aa13.97□□□□□ -0.17
NME3-209ENST00000566600 A0A1B0GVX0 72 aa13.96□□□□□ -0.17
NME3-209ENST00000566600 F8W1H4 67 aa13.95□□□□□ -0.18
NME3-209ENST00000566600 C20orf166-AS1Q96NR2 134 aa13.95□□□□□ -0.18
NME3-209ENST00000566600 KRTAP4-1Q9BYQ7 146 aa13.95□□□□□ -0.18
NME3-209ENST00000566600 NDUFB1O75438 58 aa13.94□□□□□ -0.18
NME3-209ENST00000566600 C8orf87E5RJ46 101 aa13.93□□□□□ -0.18
NME3-209ENST00000566600 ATP11AUNQ6ZP68 121 aa13.93□□□□□ -0.18
NME3-209ENST00000566600 A8MUU9 505 aa13.91□□□□□ -0.18
NME3-209ENST00000566600 A8MWP4 228 aa13.88□□□□□ -0.19
NME3-209ENST00000566600 NOTCH2NLQ7Z3S9 236 aa13.87□□□□□ -0.19
NME3-209ENST00000566600 KRTAP16-1A8MUX0 517 aa13.86□□□□□ -0.19
NME3-209ENST00000566600 IGKV3D-7A0A0C4DH55 119 aa13.79□□□□□ -0.2
NME3-209ENST00000566600 ETDBQ3ZM63 59 aa13.79□□□□□ -0.2
NME3-209ENST00000566600 Q6ZVQ6 151 aa13.77□□□□□ -0.21
NME3-209ENST00000566600 PRR15Q8IV56 129 aa13.77□□□□□ -0.21
NME3-209ENST00000566600 BPY2O14599 106 aa13.76□□□□□ -0.21
NME3-209ENST00000566600 C8orf17Q9NRJ1 99 aa13.75□□□□□ -0.21
NME3-209ENST00000566600 UBL5Q9BZL1 73 aa13.72□□□□□ -0.21
NME3-209ENST00000566600 LINC00846Q9NV44 126 aa13.71□□□□□ -0.21
NME3-209ENST00000566600 FAT4Q6V0I7 4981 aa13.67□□□□□ -0.22
NME3-209ENST00000566600 K7EQZ3 153 aa13.66□□□□□ -0.22
NME3-209ENST00000566600 Q8N9P0 234 aaPredicted RBP13.64□□□□□ -0.23
NME3-209ENST00000566600 MMP24-AS1A0A0U1RRL7 71 aa13.61□□□□□ -0.23
NME3-209ENST00000566600 A0A1B0GV90 55 aa13.61□□□□□ -0.23
NME3-209ENST00000566600 TMEM254Q8TBM7 123 aa13.6□□□□□ -0.23
NME3-209ENST00000566600 LCE2AQ5TA79 106 aaPredicted RBP13.59□□□□□ -0.23
NME3-209ENST00000566600 hDV103S1A0JD37 113 aa13.56□□□□□ -0.24
NME3-209ENST00000566600 MRPL34Q9BQ48 92 aaKnown RBP13.56□□□□□ -0.24
NME3-209ENST00000566600 KRTAP19-2Q3LHN2 52 aa13.55□□□□□ -0.24
NME3-209ENST00000566600 ZCCHC13Q8WW36 166 aaKnown RBP13.55□□□□□ -0.24
NME3-209ENST00000566600 ACYP1P07311 99 aa13.53□□□□□ -0.24
NME3-209ENST00000566600 Q8N9L7 120 aa13.53□□□□□ -0.24
NME3-209ENST00000566600 LCE2CQ5TA81 110 aa13.52□□□□□ -0.25
NME3-209ENST00000566600 COX6B2Q6YFQ2 88 aa13.49□□□□□ -0.25
NME3-209ENST00000566600 FAM240AA0A1B0GVK7 77 aa13.47□□□□□ -0.25
NME3-209ENST00000566600 CXCL6P80162 114 aa13.47□□□□□ -0.25
NME3-209ENST00000566600 CASC2Q6XLA1 102 aa13.46□□□□□ -0.25
NME3-209ENST00000566600 WFDC13Q8IUB5 93 aa13.44□□□□□ -0.26
NME3-209ENST00000566600 NDUFS5O43920 106 aa13.43□□□□□ -0.26
NME3-209ENST00000566600 HCG22E2RYF7 251 aa13.38□□□□□ -0.27
NME3-209ENST00000566600 SPINK7P58062 85 aa13.34□□□□□ -0.27
NME3-209ENST00000566600 MT1HP80294 61 aa13.34□□□□□ -0.27
NME3-209ENST00000566600 HRES1P13985 223 aa13.31□□□□□ -0.28
NME3-209ENST00000566600 ATP5EP2Q5VTU8 51 aa13.31□□□□□ -0.28
NME3-209ENST00000566600 RBM12B-AS1Q9P1G2 102 aa13.3□□□□□ -0.28
NME3-209ENST00000566600 MPLKIPQ8TAP9 179 aa13.26□□□□□ -0.29
NME3-209ENST00000566600 FAM236DA0A1B0GTK5 79 aa13.24□□□□□ -0.29
NME3-209ENST00000566600 FAM236CP0DP71 79 aa13.24□□□□□ -0.29
NME3-209ENST00000566600 J3QR89 54 aa13.23□□□□□ -0.29
NME3-209ENST00000566600 M0R2T5 61 aa13.2□□□□□ -0.3
NME3-209ENST00000566600 Q5W150 140 aa13.2□□□□□ -0.3
NME3-209ENST00000566600 LINC00643Q86TS7 51 aa13.2□□□□□ -0.3
NME3-209ENST00000566600 FLGP20930 4061 aaPredicted RBP13.18□□□□□ -0.3
NME3-209ENST00000566600 TP53AIP1Q9HCN2 124 aa13.16□□□□□ -0.3
NME3-209ENST00000566600 HIST1H4AP62805 103 aaKnown RBP13.13□□□□□ -0.31
NME3-209ENST00000566600 C7orf65Q6ZTY9 151 aa13.11□□□□□ -0.31
NME3-209ENST00000566600 IGKV2D-30A0A075B6S6 120 aa13.1□□□□□ -0.31
NME3-209ENST00000566600 IGKV2-30P06310 120 aa13.1□□□□□ -0.31
NME3-209ENST00000566600 KRTAP10-6P60371 365 aaPredicted RBP13.02□□□□□ -0.33
NME3-209ENST00000566600 LORP23490 312 aaPredicted RBP12.99□□□□□ -0.33
NME3-209ENST00000566600 A0A087WVE0 104 aa12.94□□□□□ -0.34
NME3-209ENST00000566600 K7ERU9 68 aa12.91□□□□□ -0.34
NME3-209ENST00000566600 TRAV22A0A0B4J277 110 aa12.88□□□□□ -0.35
NME3-209ENST00000566600 UQCRQO14949 82 aa12.87□□□□□ -0.35
NME3-209ENST00000566600 H1FX-AS1Q4G0G2 97 aa12.84□□□□□ -0.35
NME3-209ENST00000566600 KRTAP9-2Q9BYQ4 174 aa12.83□□□□□ -0.36
NME3-209ENST00000566600 C4orf26Q17RF5 130 aa12.82□□□□□ -0.36
NME3-209ENST00000566600 LOC101927531A0A1B0GV80 90 aa12.79□□□□□ -0.36
NME3-209ENST00000566600 ATOX1O00244 68 aa12.78□□□□□ -0.36
NME3-209ENST00000566600 LCE2DQ5TA82 110 aaPredicted RBP12.76□□□□□ -0.37
NME3-209ENST00000566600 CYP4F30PQ9H0H9 118 aa12.76□□□□□ -0.37
NME3-209ENST00000566600 H0Y9P7 68 aa12.74□□□□□ -0.37
NME3-209ENST00000566600 IMUPQ9GZP8 106 aa12.72□□□□□ -0.37
NME3-209ENST00000566600 OCR1Q9BZK8 76 aa12.7□□□□□ -0.38
NME3-209ENST00000566600 KRTAP9-8Q9BYQ0 159 aa12.68□□□□□ -0.38
NME3-209ENST00000566600 C1orf64Q8NEQ6 169 aa12.67□□□□□ -0.38
NME3-209ENST00000566600 SCGB1A1P11684 91 aa12.66□□□□□ -0.38
NME3-209ENST00000566600 MT-ATP8P03928 68 aa12.63□□□□□ -0.39
NME3-209ENST00000566600 MP68P56378 58 aa12.63□□□□□ -0.39
NME3-209ENST00000566600 C5orf47Q569G3 176 aa12.6□□□□□ -0.39
NME3-209ENST00000566600 KRTAP3-1Q9BYR8 98 aa12.6□□□□□ -0.39
NME3-209ENST00000566600 LINC00208Q96KT6 92 aa12.58□□□□□ -0.4
NME3-209ENST00000566600 MT2AP02795 61 aa12.57□□□□□ -0.4
NME3-209ENST00000566600 H3BPC8 53 aa12.51□□□□□ -0.41
NME3-209ENST00000566600 S4R3F8 94 aa12.5□□□□□ -0.41
NME3-209ENST00000566600 KRTAP10-10P60014 251 aa12.47□□□□□ -0.41
NME3-209ENST00000566600 FAM236AA0A1B0GUQ0 79 aa12.45□□□□□ -0.42
NME3-209ENST00000566600 FAM236BA0A1B0GV22 79 aa12.45□□□□□ -0.42
NME3-209ENST00000566600 MT1FP04733 61 aa12.45□□□□□ -0.42
NME3-209ENST00000566600 SMIM20Q8N5G0 67 aa12.45□□□□□ -0.42
NME3-209ENST00000566600 KLKP1Q107X0 134 aa12.4□□□□□ -0.42
NME3-209ENST00000566600 LCA10Q71F78 164 aa12.38□□□□□ -0.43
NME3-209ENST00000566600 TRAV7A0A075B6U4 112 aa12.37□□□□□ -0.43
NME3-209ENST00000566600 CSAG1Q6PB30 78 aa12.37□□□□□ -0.43
NME3-209ENST00000566600 A8MUN3 132 aa12.35□□□□□ -0.43
NME3-209ENST00000566600 KRTAP9-3Q9BYQ3 159 aa12.28□□□□□ -0.44
NME3-209ENST00000566600 KRTAP9-6A0A140TA67 174 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms