RNA–Protein interactions for RNA: ENST00000566480.5

SCAMP2-207, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 2,476 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-207ENST00000566480 LINC00483Q53H64 154 aa7.34□□□□□ -1.23
SCAMP2-207ENST00000566480 LRP1BQ9NZR2 4599 aa7.34□□□□□ -1.23
SCAMP2-207ENST00000566480 hDV103S1A0JD37 113 aa7.32□□□□□ -1.24
SCAMP2-207ENST00000566480 Q1T7F1 81 aa7.32□□□□□ -1.24
SCAMP2-207ENST00000566480 BIRC6Q9NR09 4857 aa7.31□□□□□ -1.24
SCAMP2-207ENST00000566480 IGLV7-43P04211 117 aa7.31□□□□□ -1.24
SCAMP2-207ENST00000566480 ZNF706Q9Y5V0 76 aaPredicted RBP7.31□□□□□ -1.24
SCAMP2-207ENST00000566480 A8MWP4 228 aa7.3□□□□□ -1.24
SCAMP2-207ENST00000566480 KIAA1109Q2LD37 5005 aa7.29□□□□□ -1.24
SCAMP2-207ENST00000566480 KRTAP10-1P60331 282 aa7.29□□□□□ -1.24
SCAMP2-207ENST00000566480 Q96NJ1 140 aa7.29□□□□□ -1.24
SCAMP2-207ENST00000566480 CASC2Q6XLA1 102 aa7.28□□□□□ -1.24
SCAMP2-207ENST00000566480 KRTAP29-1A8MX34 341 aaPredicted RBP7.28□□□□□ -1.24
SCAMP2-207ENST00000566480 CD164Q04900 197 aa7.27□□□□□ -1.24
SCAMP2-207ENST00000566480 VPS13BQ7Z7G8 4022 aa7.25□□□□□ -1.25
SCAMP2-207ENST00000566480 C1orf64Q8NEQ6 169 aa7.24□□□□□ -1.25
SCAMP2-207ENST00000566480 APOBP04114 4563 aaKnown RBP7.23□□□□□ -1.25
SCAMP2-207ENST00000566480 MMP24-AS1A0A0U1RRL7 71 aa7.23□□□□□ -1.25
SCAMP2-207ENST00000566480 NDUFB1O75438 58 aa7.23□□□□□ -1.25
SCAMP2-207ENST00000566480 SPINK6Q6UWN8 80 aa7.23□□□□□ -1.25
SCAMP2-207ENST00000566480 IGHV6-1A0A0B4J1U7 121 aa7.22□□□□□ -1.25
SCAMP2-207ENST00000566480 PRR4Q16378 134 aa7.22□□□□□ -1.25
SCAMP2-207ENST00000566480 ZCCHC13Q8WW36 166 aaKnown RBP7.22□□□□□ -1.25
SCAMP2-207ENST00000566480 LINC00208Q96KT6 92 aa7.21□□□□□ -1.25
SCAMP2-207ENST00000566480 TRAV22A0A0B4J277 110 aa7.21□□□□□ -1.26
SCAMP2-207ENST00000566480 A0A087X002 238 aa7.2□□□□□ -1.26
SCAMP2-207ENST00000566480 Q6ZSA8 131 aa7.2□□□□□ -1.26
SCAMP2-207ENST00000566480 NOTCH2NLQ7Z3S9 236 aa7.2□□□□□ -1.26
SCAMP2-207ENST00000566480 CYP4F30PQ9H0H9 118 aa7.2□□□□□ -1.26
SCAMP2-207ENST00000566480 RYR1P21817 5038 aa7.19□□□□□ -1.26
SCAMP2-207ENST00000566480 PSPHP1O15172 72 aa7.19□□□□□ -1.26
SCAMP2-207ENST00000566480 H0Y9P7 68 aa7.18□□□□□ -1.26
SCAMP2-207ENST00000566480 HSPG2P98160 4391 aa7.18□□□□□ -1.26
SCAMP2-207ENST00000566480 MP68P56378 58 aa7.18□□□□□ -1.26
SCAMP2-207ENST00000566480 C8orf17Q9NRJ1 99 aa7.17□□□□□ -1.26
SCAMP2-207ENST00000566480 A0A1B0GVX0 72 aa7.16□□□□□ -1.26
SCAMP2-207ENST00000566480 CDK2AP2O75956 126 aa7.16□□□□□ -1.26
SCAMP2-207ENST00000566480 NDUFS5O43920 106 aa7.16□□□□□ -1.26
SCAMP2-207ENST00000566480 KRTAP13-2Q52LG2 175 aa7.15□□□□□ -1.26
SCAMP2-207ENST00000566480 FAT1Q14517 4588 aa7.14□□□□□ -1.27
SCAMP2-207ENST00000566480 A0A1B0GVY2 172 aa7.14□□□□□ -1.27
SCAMP2-207ENST00000566480 SEC61BP60468 96 aaKnown RBP7.14□□□□□ -1.27
SCAMP2-207ENST00000566480 HERC2O95714 4834 aa7.13□□□□□ -1.27
SCAMP2-207ENST00000566480 A8MUN3 132 aa7.12□□□□□ -1.27
SCAMP2-207ENST00000566480 ASB16-AS1Q495Z4 193 aa7.11□□□□□ -1.27
SCAMP2-207ENST00000566480 Q5VV11 94 aa7.11□□□□□ -1.27
SCAMP2-207ENST00000566480 ABCA13Q86UQ4 5058 aa7.11□□□□□ -1.27
SCAMP2-207ENST00000566480 SSBP3-AS1Q7Z2R9 100 aa7.1□□□□□ -1.27
SCAMP2-207ENST00000566480 KRTAP17-1Q9BYP8 105 aa7.1□□□□□ -1.27
SCAMP2-207ENST00000566480 KRTAP1-4P0C5Y4 121 aa7.09□□□□□ -1.27
SCAMP2-207ENST00000566480 KTN1-AS1Q86SY8 53 aa7.09□□□□□ -1.27
SCAMP2-207ENST00000566480 SMR3BP02814 79 aaPredicted RBP7.08□□□□□ -1.28
SCAMP2-207ENST00000566480 MRPL34Q9BQ48 92 aaKnown RBP7.08□□□□□ -1.28
SCAMP2-207ENST00000566480 RBM12B-AS1Q9P1G2 102 aa7.08□□□□□ -1.28
SCAMP2-207ENST00000566480 A8MU10 97 aa7.07□□□□□ -1.28
SCAMP2-207ENST00000566480 PCLOQ9Y6V0 5065 aa7.07□□□□□ -1.28
SCAMP2-207ENST00000566480 PCOTHQ58A44 107 aa7.07□□□□□ -1.28
SCAMP2-207ENST00000566480 LIMD2Q9BT23 127 aa7.05□□□□□ -1.28
SCAMP2-207ENST00000566480 Q8N9P0 234 aaPredicted RBP7.04□□□□□ -1.28
SCAMP2-207ENST00000566480 TP53AIP1Q9HCN2 124 aa7.04□□□□□ -1.28
SCAMP2-207ENST00000566480 H3BPC8 53 aa7.03□□□□□ -1.28
SCAMP2-207ENST00000566480 CHKB-CPT1BH3BT56 60 aa7.03□□□□□ -1.28
SCAMP2-207ENST00000566480 Q5W150 140 aa7.02□□□□□ -1.29
SCAMP2-207ENST00000566480 ATP11AUNQ6ZP68 121 aa7.02□□□□□ -1.29
SCAMP2-207ENST00000566480 SPANXA2-OT1Q8N9U9 137 aa7.02□□□□□ -1.29
SCAMP2-207ENST00000566480 RETNLBQ9BQ08 111 aa7□□□□□ -1.29
SCAMP2-207ENST00000566480 TYMSOSQ8TAI1 123 aa7□□□□□ -1.29
SCAMP2-207ENST00000566480 LINC00313P59037 77 aa6.98□□□□□ -1.29
SCAMP2-207ENST00000566480 PRR15LQ9BU68 103 aa6.98□□□□□ -1.29
SCAMP2-207ENST00000566480 A6NN06 94 aa6.98□□□□□ -1.29
SCAMP2-207ENST00000566480 LCA10Q71F78 164 aa6.98□□□□□ -1.29
SCAMP2-207ENST00000566480 MYCBP2O75592 4640 aa6.97□□□□□ -1.29
SCAMP2-207ENST00000566480 LOC101927531A0A1B0GV80 90 aa6.97□□□□□ -1.29
SCAMP2-207ENST00000566480 SPTSSBQ8NFR3 76 aa6.96□□□□□ -1.29
SCAMP2-207ENST00000566480 KRTAP4-5Q9BYR2 181 aa6.95□□□□□ -1.3
SCAMP2-207ENST00000566480 C8orf87E5RJ46 101 aa6.93□□□□□ -1.3
SCAMP2-207ENST00000566480 IGLV7-46A0A075B6I9 117 aa6.93□□□□□ -1.3
SCAMP2-207ENST00000566480 A6NED7 52 aa6.92□□□□□ -1.3
SCAMP2-207ENST00000566480 CDC42SE1Q9NRR8 79 aa6.92□□□□□ -1.3
SCAMP2-207ENST00000566480 KRTAP13-3Q3SY46 172 aa6.92□□□□□ -1.3
SCAMP2-207ENST00000566480 LRP1Q07954 4544 aaKnown RBP6.9□□□□□ -1.3
SCAMP2-207ENST00000566480 C7orf65Q6ZTY9 151 aa6.9□□□□□ -1.31
SCAMP2-207ENST00000566480 KRTAP16-1A8MUX0 517 aa6.89□□□□□ -1.31
SCAMP2-207ENST00000566480 SPINK1P00995 79 aa6.89□□□□□ -1.31
SCAMP2-207ENST00000566480 COA5Q86WW8 74 aa6.89□□□□□ -1.31
SCAMP2-207ENST00000566480 LINC00304Q8N9R0 145 aa6.89□□□□□ -1.31
SCAMP2-207ENST00000566480 KRTAP10-4P60372 401 aaPredicted RBP6.87□□□□□ -1.31
SCAMP2-207ENST00000566480 LINC01558Q9Y6Z2 57 aa6.84□□□□□ -1.31
SCAMP2-207ENST00000566480 FLG2Q5D862 2391 aaPredicted RBP6.84□□□□□ -1.32
SCAMP2-207ENST00000566480 PKHD1L1Q86WI1 4243 aa6.83□□□□□ -1.32
SCAMP2-207ENST00000566480 HRES1P13985 223 aa6.83□□□□□ -1.32
SCAMP2-207ENST00000566480 FAT3Q8TDW7 4589 aa6.81□□□□□ -1.32
SCAMP2-207ENST00000566480 HERC1Q15751 4861 aa6.81□□□□□ -1.32
SCAMP2-207ENST00000566480 IGKV2D-30A0A075B6S6 120 aa6.81□□□□□ -1.32
SCAMP2-207ENST00000566480 IGKV2-30P06310 120 aa6.81□□□□□ -1.32
SCAMP2-207ENST00000566480 C9orf92A6NGG3 77 aa6.79□□□□□ -1.32
SCAMP2-207ENST00000566480 SPAG11AQ6PDA7 123 aa6.78□□□□□ -1.32
SCAMP2-207ENST00000566480 KRTAP23-1A1A580 65 aa6.77□□□□□ -1.33
SCAMP2-207ENST00000566480 SPINK7P58062 85 aa6.75□□□□□ -1.33
SCAMP2-207ENST00000566480 Q5VSD8 79 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms