RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.93□□□□□ -0.34
SPSB3-208ENST00000566339 IGLV5-52A0A0A0MRZ9 124 aa12.92□□□□□ -0.34
SPSB3-208ENST00000566339 IGHV6-1A0A0B4J1U7 121 aa12.91□□□□□ -0.34
SPSB3-208ENST00000566339 ZNF861PO60384 105 aa12.89□□□□□ -0.35
SPSB3-208ENST00000566339 CDC42SE1Q9NRR8 79 aa12.89□□□□□ -0.35
SPSB3-208ENST00000566339 HYDINQ4G0P3 5121 aa12.88□□□□□ -0.35
SPSB3-208ENST00000566339 NDUFS5O43920 106 aa12.88□□□□□ -0.35
SPSB3-208ENST00000566339 A0A087WTM6 91 aa12.86□□□□□ -0.35
SPSB3-208ENST00000566339 A6NED7 52 aa12.86□□□□□ -0.35
SPSB3-208ENST00000566339 VPS13DQ5THJ4 4388 aa12.85□□□□□ -0.35
SPSB3-208ENST00000566339 PSORS1C2Q9UIG4 136 aa12.84□□□□□ -0.35
SPSB3-208ENST00000566339 HRES1P13985 223 aa12.83□□□□□ -0.36
SPSB3-208ENST00000566339 LCA10Q71F78 164 aa12.83□□□□□ -0.36
SPSB3-208ENST00000566339 C8orf87E5RJ46 101 aa12.81□□□□□ -0.36
SPSB3-208ENST00000566339 KTN1-AS1Q86SY8 53 aa12.79□□□□□ -0.36
SPSB3-208ENST00000566339 RTL8CO15255 209 aa12.78□□□□□ -0.36
SPSB3-208ENST00000566339 KRTAP13-3Q3SY46 172 aa12.78□□□□□ -0.36
SPSB3-208ENST00000566339 A8MU10 97 aa12.76□□□□□ -0.37
SPSB3-208ENST00000566339 SPAG11AQ6PDA7 123 aa12.76□□□□□ -0.37
SPSB3-208ENST00000566339 SSBP3-AS1Q7Z2R9 100 aa12.74□□□□□ -0.37
SPSB3-208ENST00000566339 ALMS1Q8TCU4 4167 aa12.74□□□□□ -0.37
SPSB3-208ENST00000566339 KMT2AQ03164 3969 aa12.71□□□□□ -0.37
SPSB3-208ENST00000566339 A0A087X002 238 aa12.71□□□□□ -0.38
SPSB3-208ENST00000566339 A6NN06 94 aa12.71□□□□□ -0.38
SPSB3-208ENST00000566339 ACYP2P14621 99 aa12.71□□□□□ -0.38
SPSB3-208ENST00000566339 NOTCH2NLQ7Z3S9 236 aa12.71□□□□□ -0.38
SPSB3-208ENST00000566339 SPTSSBQ8NFR3 76 aa12.69□□□□□ -0.38
SPSB3-208ENST00000566339 DNAH17Q9UFH2 4485 aa12.69□□□□□ -0.38
SPSB3-208ENST00000566339 EPPK1P58107 5090 aaKnown RBP12.68□□□□□ -0.38
SPSB3-208ENST00000566339 IGLV7-43P04211 117 aa12.68□□□□□ -0.38
SPSB3-208ENST00000566339 SRRM2Q9UQ35 2752 aaKnown RBP12.65□□□□□ -0.38
SPSB3-208ENST00000566339 LY6G6CO95867 125 aa12.65□□□□□ -0.38
SPSB3-208ENST00000566339 Q5W150 140 aa12.64□□□□□ -0.39
SPSB3-208ENST00000566339 ANAPC11Q9NYG5 84 aa12.63□□□□□ -0.39
SPSB3-208ENST00000566339 FAM229AH3BQW9 127 aa12.62□□□□□ -0.39
SPSB3-208ENST00000566339 DMAC1Q96GE9 116 aa12.62□□□□□ -0.39
SPSB3-208ENST00000566339 FRAS1Q86XX4 4008 aa12.59□□□□□ -0.39
SPSB3-208ENST00000566339 HECTD4Q9Y4D8 3996 aa12.58□□□□□ -0.4
SPSB3-208ENST00000566339 SPINK6Q6UWN8 80 aa12.58□□□□□ -0.4
SPSB3-208ENST00000566339 SPINK7P58062 85 aa12.56□□□□□ -0.4
SPSB3-208ENST00000566339 CIRBP-AS1Q8TBR5 109 aa12.56□□□□□ -0.4
SPSB3-208ENST00000566339 C7orf65Q6ZTY9 151 aa12.55□□□□□ -0.4
SPSB3-208ENST00000566339 LINC00313P59037 77 aa12.54□□□□□ -0.4
SPSB3-208ENST00000566339 PRR26Q8N8Z3 221 aa12.53□□□□□ -0.4
SPSB3-208ENST00000566339 DNAH8Q96JB1 4490 aa12.52□□□□□ -0.41
SPSB3-208ENST00000566339 DNAH2Q9P225 4427 aa12.51□□□□□ -0.41
SPSB3-208ENST00000566339 DNAH6Q9C0G6 4158 aa12.5□□□□□ -0.41
SPSB3-208ENST00000566339 IGKV2-30P06310 120 aa12.5□□□□□ -0.41
SPSB3-208ENST00000566339 C1orf134Q5TEV5 83 aa12.5□□□□□ -0.41
SPSB3-208ENST00000566339 BIRC6Q9NR09 4857 aa12.48□□□□□ -0.41
SPSB3-208ENST00000566339 RBM12B-AS1Q9P1G2 102 aa12.43□□□□□ -0.42
SPSB3-208ENST00000566339 A0A1B0GU69 56 aa12.37□□□□□ -0.43
SPSB3-208ENST00000566339 KRTAP16-1A8MUX0 517 aa12.37□□□□□ -0.43
SPSB3-208ENST00000566339 SPATA8Q6RVD6 105 aa12.35□□□□□ -0.43
SPSB3-208ENST00000566339 FAT2Q9NYQ8 4349 aa12.32□□□□□ -0.44
SPSB3-208ENST00000566339 KRTAP13-2Q52LG2 175 aa12.31□□□□□ -0.44
SPSB3-208ENST00000566339 Q6ZSA8 131 aa12.27□□□□□ -0.45
SPSB3-208ENST00000566339 UQCR11O14957 56 aa12.25□□□□□ -0.45
SPSB3-208ENST00000566339 DNAH11Q96DT5 4516 aa12.24□□□□□ -0.45
SPSB3-208ENST00000566339 PLA2G1BP04054 148 aaKnown RBP12.23□□□□□ -0.45
SPSB3-208ENST00000566339 DNAH5Q8TE73 4624 aa12.23□□□□□ -0.45
SPSB3-208ENST00000566339 IGKV2D-30A0A075B6S6 120 aa12.23□□□□□ -0.45
SPSB3-208ENST00000566339 PKHD1P08F94 4074 aa12.22□□□□□ -0.45
SPSB3-208ENST00000566339 KRTAP10-2P60368 255 aa12.21□□□□□ -0.45
SPSB3-208ENST00000566339 PKD1P98161 4303 aa12.2□□□□□ -0.46
SPSB3-208ENST00000566339 MIR22HGQ0VDD5 57 aa12.18□□□□□ -0.46
SPSB3-208ENST00000566339 KRTAP1-4P0C5Y4 121 aa12.16□□□□□ -0.46
SPSB3-208ENST00000566339 RETNLBQ9BQ08 111 aa12.16□□□□□ -0.46
SPSB3-208ENST00000566339 SPINK1P00995 79 aa12.15□□□□□ -0.46
SPSB3-208ENST00000566339 C4orf48Q5BLP8 95 aa12.15□□□□□ -0.46
SPSB3-208ENST00000566339 RPS29P62273 56 aaKnown RBP12.13□□□□□ -0.47
SPSB3-208ENST00000566339 KIAA1109Q2LD37 5005 aa12.11□□□□□ -0.47
SPSB3-208ENST00000566339 A0A1B0GVY2 172 aa12.09□□□□□ -0.47
SPSB3-208ENST00000566339 DYNC1H1Q14204 4646 aaKnown RBP12.09□□□□□ -0.47
SPSB3-208ENST00000566339 KRTAP10-1P60331 282 aa12.08□□□□□ -0.48
SPSB3-208ENST00000566339 HERC2O95714 4834 aa12.07□□□□□ -0.48
SPSB3-208ENST00000566339 TYMSOSQ8TAI1 123 aa12.03□□□□□ -0.48
SPSB3-208ENST00000566339 LRP1BQ9NZR2 4599 aa11.98□□□□□ -0.49
SPSB3-208ENST00000566339 RYR1P21817 5038 aa11.95□□□□□ -0.5
SPSB3-208ENST00000566339 PRAC1Q96KF2 57 aa11.9□□□□□ -0.5
SPSB3-208ENST00000566339 LINC00304Q8N9R0 145 aa11.89□□□□□ -0.51
SPSB3-208ENST00000566339 PCLOQ9Y6V0 5065 aa11.86□□□□□ -0.51
SPSB3-208ENST00000566339 HSPG2P98160 4391 aa11.86□□□□□ -0.51
SPSB3-208ENST00000566339 APOBP04114 4563 aaKnown RBP11.85□□□□□ -0.51
SPSB3-208ENST00000566339 LINC01554Q52M75 96 aa11.84□□□□□ -0.51
SPSB3-208ENST00000566339 ADM2Q7Z4H4 148 aa11.83□□□□□ -0.52
SPSB3-208ENST00000566339 C20orf166-AS1Q96NR2 134 aa11.82□□□□□ -0.52
SPSB3-208ENST00000566339 A8MUU9 505 aa11.82□□□□□ -0.52
SPSB3-208ENST00000566339 Q8N1X5 172 aa11.79□□□□□ -0.52
SPSB3-208ENST00000566339 VPS13BQ7Z7G8 4022 aa11.79□□□□□ -0.52
SPSB3-208ENST00000566339 ABCA13Q86UQ4 5058 aa11.79□□□□□ -0.52
SPSB3-208ENST00000566339 KRTAP17-1Q9BYP8 105 aa11.71□□□□□ -0.54
SPSB3-208ENST00000566339 KRTAP4-5Q9BYR2 181 aa11.67□□□□□ -0.54
SPSB3-208ENST00000566339 FAT1Q14517 4588 aa11.65□□□□□ -0.54
SPSB3-208ENST00000566339 A0A1B0GU33 70 aa11.64□□□□□ -0.55
SPSB3-208ENST00000566339 H0YAA0 97 aa11.64□□□□□ -0.55
SPSB3-208ENST00000566339 CSAG1Q6PB30 78 aa11.63□□□□□ -0.55
SPSB3-208ENST00000566339 H1FX-AS1Q4G0G2 97 aa11.61□□□□□ -0.55
SPSB3-208ENST00000566339 KRTAP3-1Q9BYR8 98 aa11.59□□□□□ -0.55
SPSB3-208ENST00000566339 PKHD1L1Q86WI1 4243 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms