RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 ZNF706Q9Y5V0 76 aaPredicted RBP3.67□□□□□ -1.82
CHD9-217ENST00000565832 LRP1Q07954 4544 aaKnown RBP3.67□□□□□ -1.82
CHD9-217ENST00000565832 RPL37AP61513 92 aaKnown RBP3.66□□□□□ -1.82
CHD9-217ENST00000565832 KRTAP13-2Q52LG2 175 aa3.66□□□□□ -1.82
CHD9-217ENST00000565832 KRTAP1-4P0C5Y4 121 aa3.66□□□□□ -1.82
CHD9-217ENST00000565832 FLG2Q5D862 2391 aaPredicted RBP3.65□□□□□ -1.82
CHD9-217ENST00000565832 DSCR10P59022 87 aa3.65□□□□□ -1.82
CHD9-217ENST00000565832 CXCL6P80162 114 aa3.65□□□□□ -1.82
CHD9-217ENST00000565832 KRTAP10-4P60372 401 aaPredicted RBP3.65□□□□□ -1.83
CHD9-217ENST00000565832 ATP5EP2Q5VTU8 51 aa3.64□□□□□ -1.83
CHD9-217ENST00000565832 ANAPC13Q9BS18 74 aa3.64□□□□□ -1.83
CHD9-217ENST00000565832 KRTAP4-11Q9BYQ6 195 aa3.64□□□□□ -1.83
CHD9-217ENST00000565832 A0A1B0GW54 56 aa3.63□□□□□ -1.83
CHD9-217ENST00000565832 K7EQZ3 153 aa3.63□□□□□ -1.83
CHD9-217ENST00000565832 IGKV4-1P06312 121 aa3.63□□□□□ -1.83
CHD9-217ENST00000565832 RYR1P21817 5038 aa3.63□□□□□ -1.83
CHD9-217ENST00000565832 MYCBP2O75592 4640 aa3.63□□□□□ -1.83
CHD9-217ENST00000565832 LINC00472Q9H8W2 130 aa3.63□□□□□ -1.83
CHD9-217ENST00000565832 PKHD1L1Q86WI1 4243 aa3.62□□□□□ -1.83
CHD9-217ENST00000565832 Q96NJ1 140 aa3.62□□□□□ -1.83
CHD9-217ENST00000565832 CCDC179H3BU77 68 aa3.61□□□□□ -1.83
CHD9-217ENST00000565832 IGKV2-30P06310 120 aa3.61□□□□□ -1.83
CHD9-217ENST00000565832 SPINK6Q6UWN8 80 aa3.61□□□□□ -1.83
CHD9-217ENST00000565832 SSBP3-AS1Q7Z2R9 100 aa3.6□□□□□ -1.83
CHD9-217ENST00000565832 DMBT1Q9UGM3 2413 aaPredicted RBP3.59□□□□□ -1.83
CHD9-217ENST00000565832 FAM229BQ4G0N7 80 aa3.59□□□□□ -1.84
CHD9-217ENST00000565832 NOTCH2NLQ7Z3S9 236 aa3.58□□□□□ -1.84
CHD9-217ENST00000565832 WFDC13Q8IUB5 93 aa3.58□□□□□ -1.84
CHD9-217ENST00000565832 TYMSOSQ8TAI1 123 aa3.58□□□□□ -1.84
CHD9-217ENST00000565832 TNXBP22105 4242 aa3.58□□□□□ -1.84
CHD9-217ENST00000565832 ATOX1O00244 68 aa3.58□□□□□ -1.84
CHD9-217ENST00000565832 Q5VSD8 79 aa3.57□□□□□ -1.84
CHD9-217ENST00000565832 PRR15Q8IV56 129 aa3.57□□□□□ -1.84
CHD9-217ENST00000565832 CYSTM1Q9H1C7 97 aa3.57□□□□□ -1.84
CHD9-217ENST00000565832 A8MWP4 228 aa3.56□□□□□ -1.84
CHD9-217ENST00000565832 IGHV6-1A0A0B4J1U7 121 aa3.56□□□□□ -1.84
CHD9-217ENST00000565832 HCG22E2RYF7 251 aa3.55□□□□□ -1.84
CHD9-217ENST00000565832 CDK2AP2O75956 126 aa3.55□□□□□ -1.84
CHD9-217ENST00000565832 SERP2Q8N6R1 65 aa3.55□□□□□ -1.84
CHD9-217ENST00000565832 COX7CP15954 63 aa3.55□□□□□ -1.84
CHD9-217ENST00000565832 CD164Q04900 197 aa3.55□□□□□ -1.84
CHD9-217ENST00000565832 C1orf195Q5TG92 126 aa3.55□□□□□ -1.84
CHD9-217ENST00000565832 SS18L2Q9UHA2 77 aa3.55□□□□□ -1.84
CHD9-217ENST00000565832 OCR1Q9BZK8 76 aa3.54□□□□□ -1.84
CHD9-217ENST00000565832 FAT3Q8TDW7 4589 aa3.54□□□□□ -1.84
CHD9-217ENST00000565832 KRTAP29-1A8MX34 341 aaPredicted RBP3.53□□□□□ -1.84
CHD9-217ENST00000565832 MMP24-AS1A0A0U1RRL7 71 aa3.53□□□□□ -1.84
CHD9-217ENST00000565832 J3KT08 172 aa3.53□□□□□ -1.84
CHD9-217ENST00000565832 UQCRQO14949 82 aa3.53□□□□□ -1.84
CHD9-217ENST00000565832 NDUFB1O75438 58 aa3.53□□□□□ -1.84
CHD9-217ENST00000565832 CASC2Q6XLA1 102 aa3.53□□□□□ -1.84
CHD9-217ENST00000565832 TRAV7A0A075B6U4 112 aa3.52□□□□□ -1.85
CHD9-217ENST00000565832 A0A1B0GVX0 72 aa3.52□□□□□ -1.85
CHD9-217ENST00000565832 C20orf197Q8N268 126 aa3.52□□□□□ -1.85
CHD9-217ENST00000565832 LINC00304Q8N9R0 145 aa3.52□□□□□ -1.85
CHD9-217ENST00000565832 SNURFQ9Y675 71 aa3.52□□□□□ -1.85
CHD9-217ENST00000565832 ABCA13Q86UQ4 5058 aa3.51□□□□□ -1.85
CHD9-217ENST00000565832 hDV103S1A0JD37 113 aa3.51□□□□□ -1.85
CHD9-217ENST00000565832 SPINK1P00995 79 aa3.51□□□□□ -1.85
CHD9-217ENST00000565832 RETNLBQ9BQ08 111 aa3.51□□□□□ -1.85
CHD9-217ENST00000565832 C8orf17Q9NRJ1 99 aa3.51□□□□□ -1.85
CHD9-217ENST00000565832 ASB16-AS1Q495Z4 193 aa3.5□□□□□ -1.85
CHD9-217ENST00000565832 Q5XG85 94 aa3.5□□□□□ -1.85
CHD9-217ENST00000565832 Q8N9P0 234 aaPredicted RBP3.5□□□□□ -1.85
CHD9-217ENST00000565832 KRTAP10-8P60410 259 aa3.49□□□□□ -1.85
CHD9-217ENST00000565832 NDUFS5O43920 106 aa3.48□□□□□ -1.85
CHD9-217ENST00000565832 TMEM254Q8TBM7 123 aa3.48□□□□□ -1.85
CHD9-217ENST00000565832 LIMD2Q9BT23 127 aa3.48□□□□□ -1.85
CHD9-217ENST00000565832 LINC00313P59037 77 aa3.48□□□□□ -1.85
CHD9-217ENST00000565832 SMIM20Q8N5G0 67 aa3.48□□□□□ -1.85
CHD9-217ENST00000565832 SPAG11AQ6PDA7 123 aa3.47□□□□□ -1.85
CHD9-217ENST00000565832 MRPL34Q9BQ48 92 aaKnown RBP3.46□□□□□ -1.85
CHD9-217ENST00000565832 IGKV2D-30A0A075B6S6 120 aa3.45□□□□□ -1.86
CHD9-217ENST00000565832 A0A0U1RQV1 116 aa3.45□□□□□ -1.86
CHD9-217ENST00000565832 C9orf92A6NGG3 77 aa3.45□□□□□ -1.86
CHD9-217ENST00000565832 KLKP1Q107X0 134 aa3.45□□□□□ -1.86
CHD9-217ENST00000565832 Q5W150 140 aa3.45□□□□□ -1.86
CHD9-217ENST00000565832 HERC2O95714 4834 aa3.45□□□□□ -1.86
CHD9-217ENST00000565832 H7BZZ5 65 aa3.45□□□□□ -1.86
CHD9-217ENST00000565832 MT1HL1P0DM35 61 aa3.45□□□□□ -1.86
CHD9-217ENST00000565832 KRTAP16-1A8MUX0 517 aa3.44□□□□□ -1.86
CHD9-217ENST00000565832 C5orf47Q569G3 176 aa3.44□□□□□ -1.86
CHD9-217ENST00000565832 LINC00208Q96KT6 92 aa3.44□□□□□ -1.86
CHD9-217ENST00000565832 H0Y9P7 68 aa3.44□□□□□ -1.86
CHD9-217ENST00000565832 RPS29P62273 56 aaKnown RBP3.44□□□□□ -1.86
CHD9-217ENST00000565832 LPAP08519 4548 aa3.43□□□□□ -1.86
CHD9-217ENST00000565832 BIRC6Q9NR09 4857 aa3.43□□□□□ -1.86
CHD9-217ENST00000565832 ZCCHC13Q8WW36 166 aaKnown RBP3.42□□□□□ -1.86
CHD9-217ENST00000565832 PCLOQ9Y6V0 5065 aa3.42□□□□□ -1.86
CHD9-217ENST00000565832 TRAV22A0A0B4J277 110 aa3.42□□□□□ -1.86
CHD9-217ENST00000565832 C8orf87E5RJ46 101 aa3.42□□□□□ -1.86
CHD9-217ENST00000565832 C1orf64Q8NEQ6 169 aa3.42□□□□□ -1.86
CHD9-217ENST00000565832 MP68P56378 58 aa3.41□□□□□ -1.86
CHD9-217ENST00000565832 PRR4Q16378 134 aa3.41□□□□□ -1.86
CHD9-217ENST00000565832 TP53AIP1Q9HCN2 124 aa3.41□□□□□ -1.86
CHD9-217ENST00000565832 LRP2P98164 4655 aa3.4□□□□□ -1.87
CHD9-217ENST00000565832 KRTAP13-3Q3SY46 172 aa3.39□□□□□ -1.87
CHD9-217ENST00000565832 PCOTHQ58A44 107 aa3.39□□□□□ -1.87
CHD9-217ENST00000565832 TMEM258P61165 79 aa3.38□□□□□ -1.87
CHD9-217ENST00000565832 PRAC1Q96KF2 57 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms