RNA–Protein interactions for RNA: ENST00000565666.5

CMTM3-210, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-210ENST00000565666 J3KT08 172 aa9.8□□□□□ -0.84
CMTM3-210ENST00000565666 NOTCH2NLQ7Z3S9 236 aa9.79□□□□□ -0.84
CMTM3-210ENST00000565666 MTURNQ8N3F0 131 aa9.79□□□□□ -0.84
CMTM3-210ENST00000565666 A0A1B0GVX0 72 aa9.78□□□□□ -0.84
CMTM3-210ENST00000565666 KRTAP16-1A8MUX0 517 aa9.78□□□□□ -0.84
CMTM3-210ENST00000565666 COX6B2Q6YFQ2 88 aa9.78□□□□□ -0.84
CMTM3-210ENST00000565666 C8orf87E5RJ46 101 aa9.77□□□□□ -0.85
CMTM3-210ENST00000565666 SPCS1Q9Y6A9 102 aa9.76□□□□□ -0.85
CMTM3-210ENST00000565666 NDUFB1O75438 58 aa9.74□□□□□ -0.85
CMTM3-210ENST00000565666 COL5A1-AS1Q5SY13 56 aa9.74□□□□□ -0.85
CMTM3-210ENST00000565666 MT1HP80294 61 aa9.72□□□□□ -0.85
CMTM3-210ENST00000565666 NREPQ16612 68 aa9.7□□□□□ -0.86
CMTM3-210ENST00000565666 A8MWP4 228 aa9.68□□□□□ -0.86
CMTM3-210ENST00000565666 PCP4L1A6NKN8 68 aa9.64□□□□□ -0.87
CMTM3-210ENST00000565666 IGKV3D-7A0A0C4DH55 119 aa9.63□□□□□ -0.87
CMTM3-210ENST00000565666 M0R2T5 61 aa9.63□□□□□ -0.87
CMTM3-210ENST00000565666 C8orf17Q9NRJ1 99 aa9.63□□□□□ -0.87
CMTM3-210ENST00000565666 KRTAP9-2Q9BYQ4 174 aa9.62□□□□□ -0.87
CMTM3-210ENST00000565666 K7EP34 96 aa9.61□□□□□ -0.87
CMTM3-210ENST00000565666 SMCPP49901 116 aaPredicted RBP9.61□□□□□ -0.87
CMTM3-210ENST00000565666 PRR15Q8IV56 129 aa9.59□□□□□ -0.87
CMTM3-210ENST00000565666 Q8N9P0 234 aaPredicted RBP9.56□□□□□ -0.88
CMTM3-210ENST00000565666 ZCCHC13Q8WW36 166 aaKnown RBP9.56□□□□□ -0.88
CMTM3-210ENST00000565666 Q6ZVQ6 151 aa9.55□□□□□ -0.88
CMTM3-210ENST00000565666 PRO0461Q9UI25 63 aa9.55□□□□□ -0.88
CMTM3-210ENST00000565666 BPY2O14599 106 aa9.54□□□□□ -0.88
CMTM3-210ENST00000565666 GTF2H5Q6ZYL4 71 aa9.54□□□□□ -0.88
CMTM3-210ENST00000565666 K7EQZ3 153 aa9.53□□□□□ -0.88
CMTM3-210ENST00000565666 MMP24-AS1A0A0U1RRL7 71 aa9.51□□□□□ -0.89
CMTM3-210ENST00000565666 FAM236DA0A1B0GTK5 79 aa9.51□□□□□ -0.89
CMTM3-210ENST00000565666 FAM236CP0DP71 79 aa9.51□□□□□ -0.89
CMTM3-210ENST00000565666 KRTAP10-6P60371 365 aaPredicted RBP9.5□□□□□ -0.89
CMTM3-210ENST00000565666 RBM12B-AS1Q9P1G2 102 aa9.5□□□□□ -0.89
CMTM3-210ENST00000565666 TMEM254Q8TBM7 123 aa9.49□□□□□ -0.89
CMTM3-210ENST00000565666 MRPL34Q9BQ48 92 aaKnown RBP9.49□□□□□ -0.89
CMTM3-210ENST00000565666 HRES1P13985 223 aa9.48□□□□□ -0.89
CMTM3-210ENST00000565666 LORP23490 312 aaPredicted RBP9.47□□□□□ -0.89
CMTM3-210ENST00000565666 hDV103S1A0JD37 113 aa9.46□□□□□ -0.9
CMTM3-210ENST00000565666 NDUFS5O43920 106 aa9.44□□□□□ -0.9
CMTM3-210ENST00000565666 SPINK7P58062 85 aa9.44□□□□□ -0.9
CMTM3-210ENST00000565666 UBL5Q9BZL1 73 aa9.44□□□□□ -0.9
CMTM3-210ENST00000565666 F8W1H4 67 aa9.43□□□□□ -0.9
CMTM3-210ENST00000565666 LCE2DQ5TA82 110 aaPredicted RBP9.43□□□□□ -0.9
CMTM3-210ENST00000565666 Q8N9L7 120 aa9.42□□□□□ -0.9
CMTM3-210ENST00000565666 MPLKIPQ8TAP9 179 aa9.42□□□□□ -0.9
CMTM3-210ENST00000565666 LINC00846Q9NV44 126 aa9.42□□□□□ -0.9
CMTM3-210ENST00000565666 FLGP20930 4061 aaPredicted RBP9.4□□□□□ -0.9
CMTM3-210ENST00000565666 WFDC13Q8IUB5 93 aa9.39□□□□□ -0.91
CMTM3-210ENST00000565666 ETDBQ3ZM63 59 aa9.38□□□□□ -0.91
CMTM3-210ENST00000565666 CASC2Q6XLA1 102 aa9.37□□□□□ -0.91
CMTM3-210ENST00000565666 HCG22E2RYF7 251 aa9.3□□□□□ -0.92
CMTM3-210ENST00000565666 KRTAP9-6A0A140TA67 174 aa9.25□□□□□ -0.93
CMTM3-210ENST00000565666 Q5W150 140 aa9.25□□□□□ -0.93
CMTM3-210ENST00000565666 IGKV2D-30A0A075B6S6 120 aa9.24□□□□□ -0.93
CMTM3-210ENST00000565666 IGKV2-30P06310 120 aa9.24□□□□□ -0.93
CMTM3-210ENST00000565666 CXCL6P80162 114 aa9.23□□□□□ -0.93
CMTM3-210ENST00000565666 C7orf65Q6ZTY9 151 aa9.22□□□□□ -0.93
CMTM3-210ENST00000565666 KRTAP9-8Q9BYQ0 159 aa9.2□□□□□ -0.94
CMTM3-210ENST00000565666 ACYP1P07311 99 aa9.17□□□□□ -0.94
CMTM3-210ENST00000565666 CRCT1Q9UGL9 99 aa9.13□□□□□ -0.95
CMTM3-210ENST00000565666 FAM240AA0A1B0GVK7 77 aa9.11□□□□□ -0.95
CMTM3-210ENST00000565666 MT2AP02795 61 aa9.1□□□□□ -0.95
CMTM3-210ENST00000565666 H1FX-AS1Q4G0G2 97 aa9.1□□□□□ -0.95
CMTM3-210ENST00000565666 TP53AIP1Q9HCN2 124 aa9.1□□□□□ -0.95
CMTM3-210ENST00000565666 A0A1B0GV90 55 aa9.09□□□□□ -0.95
CMTM3-210ENST00000565666 ATP5EP2Q5VTU8 51 aa9.06□□□□□ -0.96
CMTM3-210ENST00000565666 C4orf26Q17RF5 130 aa9.05□□□□□ -0.96
CMTM3-210ENST00000565666 KRTAP10-10P60014 251 aa9.04□□□□□ -0.96
CMTM3-210ENST00000565666 MT1FP04733 61 aa9.03□□□□□ -0.96
CMTM3-210ENST00000565666 HIST1H4AP62805 103 aaKnown RBP9.02□□□□□ -0.97
CMTM3-210ENST00000565666 FSIP2Q5CZC0 6907 aa9.01□□□□□ -0.97
CMTM3-210ENST00000565666 LINC00643Q86TS7 51 aa8.95□□□□□ -0.98
CMTM3-210ENST00000565666 TRAV22A0A0B4J277 110 aa8.92□□□□□ -0.98
CMTM3-210ENST00000565666 C1orf64Q8NEQ6 169 aa8.91□□□□□ -0.98
CMTM3-210ENST00000565666 KRTAP9-3Q9BYQ3 159 aa8.9□□□□□ -0.98
CMTM3-210ENST00000565666 A0A087WVE0 104 aa8.88□□□□□ -0.99
CMTM3-210ENST00000565666 CYP4F30PQ9H0H9 118 aa8.87□□□□□ -0.99
CMTM3-210ENST00000565666 LOC101927531A0A1B0GV80 90 aa8.86□□□□□ -0.99
CMTM3-210ENST00000565666 J3QR89 54 aa8.86□□□□□ -0.99
CMTM3-210ENST00000565666 UQCRQO14949 82 aa8.86□□□□□ -0.99
CMTM3-210ENST00000565666 KRTAP3-1Q9BYR8 98 aa8.86□□□□□ -0.99
CMTM3-210ENST00000565666 S4R3F8 94 aa8.84□□□□□ -0.99
CMTM3-210ENST00000565666 LCE2BO14633 110 aa8.83□□□□□ -1
CMTM3-210ENST00000565666 H0Y9P7 68 aa8.82□□□□□ -1
CMTM3-210ENST00000565666 C5orf47Q569G3 176 aa8.81□□□□□ -1
CMTM3-210ENST00000565666 ATOX1O00244 68 aa8.8□□□□□ -1
CMTM3-210ENST00000565666 LCA10Q71F78 164 aa8.76□□□□□ -1.01
CMTM3-210ENST00000565666 CSAG1Q6PB30 78 aa8.74□□□□□ -1.01
CMTM3-210ENST00000565666 USH2AO75445 5202 aa8.69□□□□□ -1.02
CMTM3-210ENST00000565666 FAM236AA0A1B0GUQ0 79 aa8.69□□□□□ -1.02
CMTM3-210ENST00000565666 FAM236BA0A1B0GV22 79 aa8.69□□□□□ -1.02
CMTM3-210ENST00000565666 LINC00208Q96KT6 92 aa8.69□□□□□ -1.02
CMTM3-210ENST00000565666 MP68P56378 58 aa8.68□□□□□ -1.02
CMTM3-210ENST00000565666 OCR1Q9BZK8 76 aa8.68□□□□□ -1.02
CMTM3-210ENST00000565666 KRTAP19-1Q8IUB9 90 aa8.64□□□□□ -1.03
CMTM3-210ENST00000565666 SCGB1A1P11684 91 aa8.63□□□□□ -1.03
CMTM3-210ENST00000565666 KRTAP3-3Q9BYR6 98 aa8.61□□□□□ -1.03
CMTM3-210ENST00000565666 KLKP1Q107X0 134 aa8.6□□□□□ -1.03
CMTM3-210ENST00000565666 SSPOA2VEC9 5147 aa8.58□□□□□ -1.04
CMTM3-210ENST00000565666 K7ERU9 68 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms