RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 PKHD1P08F94 4074 aa5.69□□□□□ -1.5
CNEP1R1-206ENST00000565556 SPRR1BP22528 89 aa5.69□□□□□ -1.5
CNEP1R1-206ENST00000565556 DEFB116Q30KQ4 102 aa5.69□□□□□ -1.5
CNEP1R1-206ENST00000565556 CASC2Q6XLA1 102 aa5.69□□□□□ -1.5
CNEP1R1-206ENST00000565556 PRR15Q8IV56 129 aa5.69□□□□□ -1.5
CNEP1R1-206ENST00000565556 SPANXA2-OT1Q8N9U9 137 aa5.69□□□□□ -1.5
CNEP1R1-206ENST00000565556 H0Y9P7 68 aa5.68□□□□□ -1.5
CNEP1R1-206ENST00000565556 LINC00208Q96KT6 92 aa5.68□□□□□ -1.5
CNEP1R1-206ENST00000565556 A8MWP4 228 aa5.68□□□□□ -1.5
CNEP1R1-206ENST00000565556 CDK2AP2O75956 126 aa5.68□□□□□ -1.5
CNEP1R1-206ENST00000565556 RPL37AP61513 92 aaKnown RBP5.68□□□□□ -1.5
CNEP1R1-206ENST00000565556 PRR4Q16378 134 aa5.68□□□□□ -1.5
CNEP1R1-206ENST00000565556 RYR3Q15413 4870 aa5.66□□□□□ -1.5
CNEP1R1-206ENST00000565556 SMR3BP02814 79 aaPredicted RBP5.65□□□□□ -1.5
CNEP1R1-206ENST00000565556 PSPHP1O15172 72 aa5.65□□□□□ -1.51
CNEP1R1-206ENST00000565556 LINC00483Q53H64 154 aa5.65□□□□□ -1.51
CNEP1R1-206ENST00000565556 LINC00472Q9H8W2 130 aa5.64□□□□□ -1.51
CNEP1R1-206ENST00000565556 DYNC1H1Q14204 4646 aaKnown RBP5.63□□□□□ -1.51
CNEP1R1-206ENST00000565556 LRP1BQ9NZR2 4599 aa5.63□□□□□ -1.51
CNEP1R1-206ENST00000565556 SPINK6Q6UWN8 80 aa5.62□□□□□ -1.51
CNEP1R1-206ENST00000565556 SRRM2Q9UQ35 2752 aaKnown RBP5.62□□□□□ -1.51
CNEP1R1-206ENST00000565556 PLA2G1BP04054 148 aaKnown RBP5.62□□□□□ -1.51
CNEP1R1-206ENST00000565556 LIMD2Q9BT23 127 aa5.61□□□□□ -1.51
CNEP1R1-206ENST00000565556 MMP24-AS1A0A0U1RRL7 71 aa5.6□□□□□ -1.51
CNEP1R1-206ENST00000565556 A8MUN3 132 aa5.6□□□□□ -1.51
CNEP1R1-206ENST00000565556 KRTAP10-4P60372 401 aaPredicted RBP5.59□□□□□ -1.51
CNEP1R1-206ENST00000565556 Q5VV11 94 aa5.59□□□□□ -1.51
CNEP1R1-206ENST00000565556 H3BS24 57 aa5.58□□□□□ -1.52
CNEP1R1-206ENST00000565556 MOBPQ13875 183 aa5.58□□□□□ -1.52
CNEP1R1-206ENST00000565556 TP53AIP1Q9HCN2 124 aa5.58□□□□□ -1.52
CNEP1R1-206ENST00000565556 IGLV9-49A0A0B4J1Y8 123 aa5.57□□□□□ -1.52
CNEP1R1-206ENST00000565556 Q8N9P0 234 aaPredicted RBP5.57□□□□□ -1.52
CNEP1R1-206ENST00000565556 ANAPC11Q9NYG5 84 aa5.57□□□□□ -1.52
CNEP1R1-206ENST00000565556 APOBP04114 4563 aaKnown RBP5.57□□□□□ -1.52
CNEP1R1-206ENST00000565556 IGLV7-46A0A075B6I9 117 aa5.56□□□□□ -1.52
CNEP1R1-206ENST00000565556 PMAIP1Q13794 54 aa5.56□□□□□ -1.52
CNEP1R1-206ENST00000565556 COA5Q86WW8 74 aa5.56□□□□□ -1.52
CNEP1R1-206ENST00000565556 KRTAP1-4P0C5Y4 121 aa5.55□□□□□ -1.52
CNEP1R1-206ENST00000565556 ASB16-AS1Q495Z4 193 aa5.55□□□□□ -1.52
CNEP1R1-206ENST00000565556 Q5VSD8 79 aa5.55□□□□□ -1.52
CNEP1R1-206ENST00000565556 SSBP3-AS1Q7Z2R9 100 aa5.55□□□□□ -1.52
CNEP1R1-206ENST00000565556 PRR15LQ9BU68 103 aa5.55□□□□□ -1.52
CNEP1R1-206ENST00000565556 VPS13BQ7Z7G8 4022 aa5.54□□□□□ -1.52
CNEP1R1-206ENST00000565556 CHKB-CPT1BH3BT56 60 aa5.54□□□□□ -1.52
CNEP1R1-206ENST00000565556 Q75L30 129 aa5.54□□□□□ -1.52
CNEP1R1-206ENST00000565556 Q96NJ1 140 aa5.54□□□□□ -1.52
CNEP1R1-206ENST00000565556 Q8N1X5 172 aa5.53□□□□□ -1.52
CNEP1R1-206ENST00000565556 C8orf17Q9NRJ1 99 aa5.53□□□□□ -1.52
CNEP1R1-206ENST00000565556 LOC101927531A0A1B0GV80 90 aa5.52□□□□□ -1.53
CNEP1R1-206ENST00000565556 A0A087X002 238 aa5.51□□□□□ -1.53
CNEP1R1-206ENST00000565556 SEC61GP60059 68 aa5.51□□□□□ -1.53
CNEP1R1-206ENST00000565556 A0A1B0GVX0 72 aa5.51□□□□□ -1.53
CNEP1R1-206ENST00000565556 CD164Q04900 197 aa5.51□□□□□ -1.53
CNEP1R1-206ENST00000565556 KRTAP13-2Q52LG2 175 aa5.51□□□□□ -1.53
CNEP1R1-206ENST00000565556 PCOTHQ58A44 107 aa5.51□□□□□ -1.53
CNEP1R1-206ENST00000565556 TYMSOSQ8TAI1 123 aa5.49□□□□□ -1.53
CNEP1R1-206ENST00000565556 NDUFS5O43920 106 aa5.48□□□□□ -1.53
CNEP1R1-206ENST00000565556 A6NED7 52 aa5.48□□□□□ -1.53
CNEP1R1-206ENST00000565556 MRPL34Q9BQ48 92 aaKnown RBP5.48□□□□□ -1.53
CNEP1R1-206ENST00000565556 HSPG2P98160 4391 aa5.47□□□□□ -1.53
CNEP1R1-206ENST00000565556 IGHV6-1A0A0B4J1U7 121 aa5.47□□□□□ -1.53
CNEP1R1-206ENST00000565556 PRR26Q8N8Z3 221 aa5.47□□□□□ -1.53
CNEP1R1-206ENST00000565556 LINC01558Q9Y6Z2 57 aa5.47□□□□□ -1.53
CNEP1R1-206ENST00000565556 A8MU10 97 aa5.46□□□□□ -1.54
CNEP1R1-206ENST00000565556 ATP11AUNQ6ZP68 121 aa5.46□□□□□ -1.54
CNEP1R1-206ENST00000565556 RYR1P21817 5038 aa5.46□□□□□ -1.54
CNEP1R1-206ENST00000565556 EPPK1P58107 5090 aaKnown RBP5.46□□□□□ -1.54
CNEP1R1-206ENST00000565556 FAT1Q14517 4588 aa5.45□□□□□ -1.54
CNEP1R1-206ENST00000565556 KRTAP17-1Q9BYP8 105 aa5.45□□□□□ -1.54
CNEP1R1-206ENST00000565556 CDC42SE1Q9NRR8 79 aa5.45□□□□□ -1.54
CNEP1R1-206ENST00000565556 SPAG11AQ6PDA7 123 aa5.44□□□□□ -1.54
CNEP1R1-206ENST00000565556 LCA10Q71F78 164 aa5.43□□□□□ -1.54
CNEP1R1-206ENST00000565556 PKHD1L1Q86WI1 4243 aa5.43□□□□□ -1.54
CNEP1R1-206ENST00000565556 SPINK1P00995 79 aa5.43□□□□□ -1.54
CNEP1R1-206ENST00000565556 KTN1-AS1Q86SY8 53 aa5.43□□□□□ -1.54
CNEP1R1-206ENST00000565556 LINC00304Q8N9R0 145 aa5.43□□□□□ -1.54
CNEP1R1-206ENST00000565556 SPTSSBQ8NFR3 76 aa5.43□□□□□ -1.54
CNEP1R1-206ENST00000565556 KIAA1109Q2LD37 5005 aa5.42□□□□□ -1.54
CNEP1R1-206ENST00000565556 HRES1P13985 223 aa5.42□□□□□ -1.54
CNEP1R1-206ENST00000565556 RPS29P62273 56 aaKnown RBP5.4□□□□□ -1.54
CNEP1R1-206ENST00000565556 KRTAP10-8P60410 259 aa5.39□□□□□ -1.55
CNEP1R1-206ENST00000565556 A6NN06 94 aa5.38□□□□□ -1.55
CNEP1R1-206ENST00000565556 C8orf87E5RJ46 101 aa5.37□□□□□ -1.55
CNEP1R1-206ENST00000565556 NOTCH2NLQ7Z3S9 236 aa5.37□□□□□ -1.55
CNEP1R1-206ENST00000565556 KRTAP13-3Q3SY46 172 aa5.37□□□□□ -1.55
CNEP1R1-206ENST00000565556 KRTAP4-5Q9BYR2 181 aa5.35□□□□□ -1.55
CNEP1R1-206ENST00000565556 ACYP2P14621 99 aa5.34□□□□□ -1.55
CNEP1R1-206ENST00000565556 SPINK7P58062 85 aa5.34□□□□□ -1.55
CNEP1R1-206ENST00000565556 BIRC6Q9NR09 4857 aa5.33□□□□□ -1.56
CNEP1R1-206ENST00000565556 Q5W150 140 aa5.33□□□□□ -1.56
CNEP1R1-206ENST00000565556 C7orf65Q6ZTY9 151 aa5.33□□□□□ -1.56
CNEP1R1-206ENST00000565556 FLG2Q5D862 2391 aaPredicted RBP5.33□□□□□ -1.56
CNEP1R1-206ENST00000565556 MT1HL1P0DM35 61 aa5.31□□□□□ -1.56
CNEP1R1-206ENST00000565556 DMAC1Q96GE9 116 aa5.31□□□□□ -1.56
CNEP1R1-206ENST00000565556 RBM12B-AS1Q9P1G2 102 aa5.3□□□□□ -1.56
CNEP1R1-206ENST00000565556 LINC00313P59037 77 aa5.28□□□□□ -1.56
CNEP1R1-206ENST00000565556 IGKV2-30P06310 120 aa5.26□□□□□ -1.57
CNEP1R1-206ENST00000565556 LRP1Q07954 4544 aaKnown RBP5.25□□□□□ -1.57
CNEP1R1-206ENST00000565556 HERC2O95714 4834 aa5.25□□□□□ -1.57
CNEP1R1-206ENST00000565556 FAT3Q8TDW7 4589 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms