RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 DSCR10P59022 87 aa10.89□□□□□ -0.67
CSPG4P13-201ENST00000565545 A8MWP4 228 aa10.87□□□□□ -0.67
CSPG4P13-201ENST00000565545 C1orf195Q5TG92 126 aa10.87□□□□□ -0.67
CSPG4P13-201ENST00000565545 NDUFB1O75438 58 aa10.86□□□□□ -0.67
CSPG4P13-201ENST00000565545 HIST1H4AP62805 103 aaKnown RBP10.86□□□□□ -0.67
CSPG4P13-201ENST00000565545 PRR15Q8IV56 129 aa10.82□□□□□ -0.68
CSPG4P13-201ENST00000565545 K7EQZ3 153 aa10.81□□□□□ -0.68
CSPG4P13-201ENST00000565545 Q8N9L7 120 aa10.8□□□□□ -0.68
CSPG4P13-201ENST00000565545 A0A1B0GVX0 72 aa10.77□□□□□ -0.69
CSPG4P13-201ENST00000565545 A0A087WVE0 104 aa10.76□□□□□ -0.69
CSPG4P13-201ENST00000565545 SCGB1A1P11684 91 aa10.76□□□□□ -0.69
CSPG4P13-201ENST00000565545 IGHV6-1A0A0B4J1U7 121 aa10.72□□□□□ -0.69
CSPG4P13-201ENST00000565545 HCG22E2RYF7 251 aa10.71□□□□□ -0.69
CSPG4P13-201ENST00000565545 C8orf87E5RJ46 101 aa10.71□□□□□ -0.69
CSPG4P13-201ENST00000565545 FAM236AA0A1B0GUQ0 79 aa10.69□□□□□ -0.7
CSPG4P13-201ENST00000565545 FAM236BA0A1B0GV22 79 aa10.69□□□□□ -0.7
CSPG4P13-201ENST00000565545 C8orf17Q9NRJ1 99 aa10.69□□□□□ -0.7
CSPG4P13-201ENST00000565545 FP248Q71RG6 208 aaPredicted RBP10.68□□□□□ -0.7
CSPG4P13-201ENST00000565545 MMP24-AS1A0A0U1RRL7 71 aa10.67□□□□□ -0.7
CSPG4P13-201ENST00000565545 CASC2Q6XLA1 102 aa10.65□□□□□ -0.7
CSPG4P13-201ENST00000565545 RETNLBQ9BQ08 111 aa10.65□□□□□ -0.7
CSPG4P13-201ENST00000565545 LINC00313P59037 77 aa10.64□□□□□ -0.71
CSPG4P13-201ENST00000565545 hDV103S1A0JD37 113 aa10.63□□□□□ -0.71
CSPG4P13-201ENST00000565545 WFDC13Q8IUB5 93 aa10.63□□□□□ -0.71
CSPG4P13-201ENST00000565545 ATOX1O00244 68 aa10.61□□□□□ -0.71
CSPG4P13-201ENST00000565545 TMEM254Q8TBM7 123 aa10.61□□□□□ -0.71
CSPG4P13-201ENST00000565545 LPAP08519 4548 aa10.61□□□□□ -0.71
CSPG4P13-201ENST00000565545 NOTCH2NLQ7Z3S9 236 aa10.6□□□□□ -0.71
CSPG4P13-201ENST00000565545 SMIM20Q8N5G0 67 aa10.58□□□□□ -0.72
CSPG4P13-201ENST00000565545 MRPL34Q9BQ48 92 aaKnown RBP10.57□□□□□ -0.72
CSPG4P13-201ENST00000565545 IGLV7-46A0A075B6I9 117 aa10.54□□□□□ -0.72
CSPG4P13-201ENST00000565545 PRR4Q16378 134 aa10.54□□□□□ -0.72
CSPG4P13-201ENST00000565545 KRTAP16-1A8MUX0 517 aa10.51□□□□□ -0.73
CSPG4P13-201ENST00000565545 ANAPC13Q9BS18 74 aa10.49□□□□□ -0.73
CSPG4P13-201ENST00000565545 OCR1Q9BZK8 76 aa10.49□□□□□ -0.73
CSPG4P13-201ENST00000565545 TP53AIP1Q9HCN2 124 aa10.49□□□□□ -0.73
CSPG4P13-201ENST00000565545 TRAV7A0A075B6U4 112 aa10.48□□□□□ -0.73
CSPG4P13-201ENST00000565545 A0A0U1RQV1 116 aa10.48□□□□□ -0.73
CSPG4P13-201ENST00000565545 Q8N9P0 234 aaPredicted RBP10.48□□□□□ -0.73
CSPG4P13-201ENST00000565545 C9orf92A6NGG3 77 aa10.46□□□□□ -0.73
CSPG4P13-201ENST00000565545 SERP2Q8N6R1 65 aa10.46□□□□□ -0.73
CSPG4P13-201ENST00000565545 NDUFS5O43920 106 aa10.45□□□□□ -0.74
CSPG4P13-201ENST00000565545 UQCRQO14949 82 aa10.44□□□□□ -0.74
CSPG4P13-201ENST00000565545 KRTAP13-3Q3SY46 172 aa10.43□□□□□ -0.74
CSPG4P13-201ENST00000565545 KRTAP9-2Q9BYQ4 174 aa10.42□□□□□ -0.74
CSPG4P13-201ENST00000565545 TPRXLQ17RH7 258 aa10.4□□□□□ -0.74
CSPG4P13-201ENST00000565545 C20orf166-AS1Q96NR2 134 aa10.4□□□□□ -0.74
CSPG4P13-201ENST00000565545 MUC2Q02817 5179 aa10.4□□□□□ -0.74
CSPG4P13-201ENST00000565545 A8MUU9 505 aa10.39□□□□□ -0.75
CSPG4P13-201ENST00000565545 COX7CP15954 63 aa10.39□□□□□ -0.75
CSPG4P13-201ENST00000565545 C5orf47Q569G3 176 aa10.38□□□□□ -0.75
CSPG4P13-201ENST00000565545 Q75L30 129 aa10.35□□□□□ -0.75
CSPG4P13-201ENST00000565545 PCP4P48539 62 aa10.33□□□□□ -0.76
CSPG4P13-201ENST00000565545 TRAV22A0A0B4J277 110 aa10.31□□□□□ -0.76
CSPG4P13-201ENST00000565545 MP68P56378 58 aa10.31□□□□□ -0.76
CSPG4P13-201ENST00000565545 XP32Q5T750 250 aa10.31□□□□□ -0.76
CSPG4P13-201ENST00000565545 H0Y9P7 68 aa10.29□□□□□ -0.76
CSPG4P13-201ENST00000565545 H3BPC8 53 aa10.29□□□□□ -0.76
CSPG4P13-201ENST00000565545 ZCCHC13Q8WW36 166 aaKnown RBP10.27□□□□□ -0.77
CSPG4P13-201ENST00000565545 RPL37P61927 97 aaKnown RBP10.26□□□□□ -0.77
CSPG4P13-201ENST00000565545 Q5W150 140 aa10.26□□□□□ -0.77
CSPG4P13-201ENST00000565545 LCE2AQ5TA79 106 aaPredicted RBP10.23□□□□□ -0.77
CSPG4P13-201ENST00000565545 C20orf197Q8N268 126 aa10.23□□□□□ -0.77
CSPG4P13-201ENST00000565545 CCDC179H3BU77 68 aa10.22□□□□□ -0.77
CSPG4P13-201ENST00000565545 FAT4Q6V0I7 4981 aa10.21□□□□□ -0.77
CSPG4P13-201ENST00000565545 KRTAP9-6A0A140TA67 174 aa10.21□□□□□ -0.77
CSPG4P13-201ENST00000565545 ATP11AUNQ6ZP68 121 aa10.21□□□□□ -0.77
CSPG4P13-201ENST00000565545 KLKP1Q107X0 134 aa10.2□□□□□ -0.78
CSPG4P13-201ENST00000565545 LINC00208Q96KT6 92 aa10.2□□□□□ -0.78
CSPG4P13-201ENST00000565545 C1orf64Q8NEQ6 169 aa10.19□□□□□ -0.78
CSPG4P13-201ENST00000565545 LOC101927531A0A1B0GV80 90 aa10.18□□□□□ -0.78
CSPG4P13-201ENST00000565545 SNURFQ9Y675 71 aa10.15□□□□□ -0.78
CSPG4P13-201ENST00000565545 NDUFC1O43677 76 aa10.12□□□□□ -0.79
CSPG4P13-201ENST00000565545 IGKV2-30P06310 120 aa10.12□□□□□ -0.79
CSPG4P13-201ENST00000565545 CYP4F30PQ9H0H9 118 aa10.09□□□□□ -0.79
CSPG4P13-201ENST00000565545 SEC61BP60468 96 aaKnown RBP10.07□□□□□ -0.8
CSPG4P13-201ENST00000565545 C7orf65Q6ZTY9 151 aa10.07□□□□□ -0.8
CSPG4P13-201ENST00000565545 IGKV2D-30A0A075B6S6 120 aa10.05□□□□□ -0.8
CSPG4P13-201ENST00000565545 PCOTHQ58A44 107 aa10.04□□□□□ -0.8
CSPG4P13-201ENST00000565545 MUC17Q685J3 4493 aa10.03□□□□□ -0.8
CSPG4P13-201ENST00000565545 CYSTM1Q9H1C7 97 aa10.02□□□□□ -0.81
CSPG4P13-201ENST00000565545 H7BZZ5 65 aa10.01□□□□□ -0.81
CSPG4P13-201ENST00000565545 SPINK7P58062 85 aa10□□□□□ -0.81
CSPG4P13-201ENST00000565545 TMEM258P61165 79 aa9.93□□□□□ -0.82
CSPG4P13-201ENST00000565545 SPANXA2-OT1Q8N9U9 137 aa9.93□□□□□ -0.82
CSPG4P13-201ENST00000565545 HRES1P13985 223 aa9.9□□□□□ -0.82
CSPG4P13-201ENST00000565545 ATP5EP56381 51 aaPredicted RBP9.87□□□□□ -0.83
CSPG4P13-201ENST00000565545 LCE2DQ5TA82 110 aaPredicted RBP9.84□□□□□ -0.83
CSPG4P13-201ENST00000565545 FAM236DA0A1B0GTK5 79 aa9.83□□□□□ -0.84
CSPG4P13-201ENST00000565545 FAM236CP0DP71 79 aa9.83□□□□□ -0.84
CSPG4P13-201ENST00000565545 FSIP2Q5CZC0 6907 aa9.82□□□□□ -0.84
CSPG4P13-201ENST00000565545 KRTAP4-1Q9BYQ7 146 aa9.79□□□□□ -0.84
CSPG4P13-201ENST00000565545 C4orf26Q17RF5 130 aa9.78□□□□□ -0.84
CSPG4P13-201ENST00000565545 CRCT1Q9UGL9 99 aa9.78□□□□□ -0.84
CSPG4P13-201ENST00000565545 COX6B2Q6YFQ2 88 aa9.76□□□□□ -0.85
CSPG4P13-201ENST00000565545 A8MUN3 132 aa9.75□□□□□ -0.85
CSPG4P13-201ENST00000565545 DMAC1Q96GE9 116 aa9.75□□□□□ -0.85
CSPG4P13-201ENST00000565545 MPLKIPQ8TAP9 179 aa9.73□□□□□ -0.85
CSPG4P13-201ENST00000565545 RBM12B-AS1Q9P1G2 102 aa9.72□□□□□ -0.85
CSPG4P13-201ENST00000565545 ACYP2P14621 99 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms