RNA–Protein interactions for RNA: ENST00000565224.5

SMG1-210, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-210ENST00000565224 CDK2AP2O75956 126 aa4.35□□□□□ -1.71
SMG1-210ENST00000565224 RBM12B-AS1Q9P1G2 102 aa4.35□□□□□ -1.71
SMG1-210ENST00000565224 VPS13DQ5THJ4 4388 aa4.35□□□□□ -1.71
SMG1-210ENST00000565224 Q6ZR54 194 aa4.35□□□□□ -1.71
SMG1-210ENST00000565224 Q8N9P0 234 aaPredicted RBP4.35□□□□□ -1.71
SMG1-210ENST00000565224 LIMD2Q9BT23 127 aa4.35□□□□□ -1.71
SMG1-210ENST00000565224 NDUFS5O43920 106 aa4.34□□□□□ -1.71
SMG1-210ENST00000565224 ZNF861PO60384 105 aa4.34□□□□□ -1.71
SMG1-210ENST00000565224 COA5Q86WW8 74 aa4.34□□□□□ -1.71
SMG1-210ENST00000565224 PLAC8Q9NZF1 115 aa4.34□□□□□ -1.71
SMG1-210ENST00000565224 PCOTHQ58A44 107 aa4.34□□□□□ -1.72
SMG1-210ENST00000565224 Q5VV11 94 aa4.34□□□□□ -1.72
SMG1-210ENST00000565224 RYR2Q92736 4967 aa4.34□□□□□ -1.72
SMG1-210ENST00000565224 ANAPC11Q9NYG5 84 aa4.33□□□□□ -1.72
SMG1-210ENST00000565224 MRPL34Q9BQ48 92 aaKnown RBP4.33□□□□□ -1.72
SMG1-210ENST00000565224 DNAH8Q96JB1 4490 aa4.32□□□□□ -1.72
SMG1-210ENST00000565224 PRR15LQ9BU68 103 aa4.32□□□□□ -1.72
SMG1-210ENST00000565224 DNAH2Q9P225 4427 aa4.32□□□□□ -1.72
SMG1-210ENST00000565224 DNAH17Q9UFH2 4485 aa4.31□□□□□ -1.72
SMG1-210ENST00000565224 A0A087X002 238 aa4.3□□□□□ -1.72
SMG1-210ENST00000565224 CHKB-CPT1BH3BT56 60 aa4.3□□□□□ -1.72
SMG1-210ENST00000565224 NOTCH2NLQ7Z3S9 236 aa4.3□□□□□ -1.72
SMG1-210ENST00000565224 PKHD1P08F94 4074 aa4.28□□□□□ -1.72
SMG1-210ENST00000565224 LOC101927531A0A1B0GV80 90 aa4.28□□□□□ -1.72
SMG1-210ENST00000565224 IGLV7-43P04211 117 aa4.28□□□□□ -1.72
SMG1-210ENST00000565224 Q75L30 129 aa4.28□□□□□ -1.72
SMG1-210ENST00000565224 HECTD4Q9Y4D8 3996 aa4.28□□□□□ -1.72
SMG1-210ENST00000565224 SPINK6Q6UWN8 80 aa4.27□□□□□ -1.73
SMG1-210ENST00000565224 PRR26Q8N8Z3 221 aa4.27□□□□□ -1.73
SMG1-210ENST00000565224 ALMS1Q8TCU4 4167 aa4.27□□□□□ -1.73
SMG1-210ENST00000565224 A8MU10 97 aa4.26□□□□□ -1.73
SMG1-210ENST00000565224 C1orf134Q5TEV5 83 aa4.26□□□□□ -1.73
SMG1-210ENST00000565224 CIRBP-AS1Q8TBR5 109 aa4.26□□□□□ -1.73
SMG1-210ENST00000565224 C8orf87E5RJ46 101 aa4.26□□□□□ -1.73
SMG1-210ENST00000565224 HRES1P13985 223 aa4.26□□□□□ -1.73
SMG1-210ENST00000565224 LINC01558Q9Y6Z2 57 aa4.26□□□□□ -1.73
SMG1-210ENST00000565224 EPPK1P58107 5090 aaKnown RBP4.26□□□□□ -1.73
SMG1-210ENST00000565224 FAT2Q9NYQ8 4349 aa4.26□□□□□ -1.73
SMG1-210ENST00000565224 ATP11AUNQ6ZP68 121 aa4.25□□□□□ -1.73
SMG1-210ENST00000565224 A6NED7 52 aa4.25□□□□□ -1.73
SMG1-210ENST00000565224 KRTAP13-3Q3SY46 172 aa4.25□□□□□ -1.73
SMG1-210ENST00000565224 Q5W150 140 aa4.25□□□□□ -1.73
SMG1-210ENST00000565224 SPAG11AQ6PDA7 123 aa4.25□□□□□ -1.73
SMG1-210ENST00000565224 SSBP3-AS1Q7Z2R9 100 aa4.25□□□□□ -1.73
SMG1-210ENST00000565224 LOC100996750A0A140TA64 210 aa4.23□□□□□ -1.73
SMG1-210ENST00000565224 LCA10Q71F78 164 aa4.23□□□□□ -1.73
SMG1-210ENST00000565224 KRTAP4-6Q9BYQ5 205 aa4.23□□□□□ -1.73
SMG1-210ENST00000565224 DNAH6Q9C0G6 4158 aa4.23□□□□□ -1.73
SMG1-210ENST00000565224 A6NN06 94 aa4.21□□□□□ -1.74
SMG1-210ENST00000565224 CDC42SE1Q9NRR8 79 aa4.21□□□□□ -1.74
SMG1-210ENST00000565224 LY6G6CO95867 125 aa4.2□□□□□ -1.74
SMG1-210ENST00000565224 C7orf65Q6ZTY9 151 aa4.2□□□□□ -1.74
SMG1-210ENST00000565224 SPTSSBQ8NFR3 76 aa4.2□□□□□ -1.74
SMG1-210ENST00000565224 J3QL48 77 aa4.2□□□□□ -1.74
SMG1-210ENST00000565224 LINC00313P59037 77 aa4.2□□□□□ -1.74
SMG1-210ENST00000565224 FAM229AH3BQW9 127 aa4.19□□□□□ -1.74
SMG1-210ENST00000565224 ACYP2P14621 99 aa4.19□□□□□ -1.74
SMG1-210ENST00000565224 PKD1P98161 4303 aa4.19□□□□□ -1.74
SMG1-210ENST00000565224 LCE2BO14633 110 aa4.19□□□□□ -1.74
SMG1-210ENST00000565224 KRTAP10-2P60368 255 aa4.19□□□□□ -1.74
SMG1-210ENST00000565224 DNAH11Q96DT5 4516 aa4.19□□□□□ -1.74
SMG1-210ENST00000565224 DNAH5Q8TE73 4624 aa4.18□□□□□ -1.74
SMG1-210ENST00000565224 KRTAP13-2Q52LG2 175 aa4.18□□□□□ -1.74
SMG1-210ENST00000565224 DMAC1Q96GE9 116 aa4.17□□□□□ -1.74
SMG1-210ENST00000565224 SPINK7P58062 85 aa4.17□□□□□ -1.74
SMG1-210ENST00000565224 IGKV2-30P06310 120 aa4.16□□□□□ -1.74
SMG1-210ENST00000565224 RETNLBQ9BQ08 111 aa4.16□□□□□ -1.74
SMG1-210ENST00000565224 Q6ZSA8 131 aa4.15□□□□□ -1.75
SMG1-210ENST00000565224 KRTAP16-1A8MUX0 517 aa4.14□□□□□ -1.75
SMG1-210ENST00000565224 KRTAP10-1P60331 282 aa4.14□□□□□ -1.75
SMG1-210ENST00000565224 LRP1BQ9NZR2 4599 aa4.13□□□□□ -1.75
SMG1-210ENST00000565224 KRTAP1-4P0C5Y4 121 aa4.12□□□□□ -1.75
SMG1-210ENST00000565224 KIAA1109Q2LD37 5005 aa4.1□□□□□ -1.75
SMG1-210ENST00000565224 IGKV2D-30A0A075B6S6 120 aa4.1□□□□□ -1.75
SMG1-210ENST00000565224 DYNC1H1Q14204 4646 aaKnown RBP4.1□□□□□ -1.75
SMG1-210ENST00000565224 A0A1B0GU69 56 aa4.09□□□□□ -1.75
SMG1-210ENST00000565224 LINC01554Q52M75 96 aa4.09□□□□□ -1.75
SMG1-210ENST00000565224 BIRC6Q9NR09 4857 aa4.08□□□□□ -1.76
SMG1-210ENST00000565224 SPINK1P00995 79 aa4.07□□□□□ -1.76
SMG1-210ENST00000565224 PLA2G1BP04054 148 aaKnown RBP4.07□□□□□ -1.76
SMG1-210ENST00000565224 TYMSOSQ8TAI1 123 aa4.07□□□□□ -1.76
SMG1-210ENST00000565224 APOBP04114 4563 aaKnown RBP4.06□□□□□ -1.76
SMG1-210ENST00000565224 HSPG2P98160 4391 aa4.05□□□□□ -1.76
SMG1-210ENST00000565224 A0A0A0MQY5 61 aa4.05□□□□□ -1.76
SMG1-210ENST00000565224 FAT1Q14517 4588 aa4.05□□□□□ -1.76
SMG1-210ENST00000565224 SPATA8Q6RVD6 105 aa4.04□□□□□ -1.76
SMG1-210ENST00000565224 VPS13BQ7Z7G8 4022 aa4.03□□□□□ -1.76
SMG1-210ENST00000565224 UQCR11O14957 56 aa4.03□□□□□ -1.76
SMG1-210ENST00000565224 XP32Q5T750 250 aa4.03□□□□□ -1.76
SMG1-210ENST00000565224 LINC00304Q8N9R0 145 aa4.03□□□□□ -1.76
SMG1-210ENST00000565224 RPS29P62273 56 aaKnown RBP4.02□□□□□ -1.77
SMG1-210ENST00000565224 RYR1P21817 5038 aa4.02□□□□□ -1.77
SMG1-210ENST00000565224 MIR22HGQ0VDD5 57 aa4.02□□□□□ -1.77
SMG1-210ENST00000565224 HERC2O95714 4834 aa4□□□□□ -1.77
SMG1-210ENST00000565224 Q8N1X5 172 aa3.99□□□□□ -1.77
SMG1-210ENST00000565224 LCE2AQ5TA79 106 aaPredicted RBP3.99□□□□□ -1.77
SMG1-210ENST00000565224 PCLOQ9Y6V0 5065 aa3.99□□□□□ -1.77
SMG1-210ENST00000565224 MYCBP2O75592 4640 aa3.98□□□□□ -1.77
SMG1-210ENST00000565224 A0A1B0GVY2 172 aa3.98□□□□□ -1.77
SMG1-210ENST00000565224 ABCA13Q86UQ4 5058 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms