RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 FAT1Q14517 4588 aa2.2□□□□□ -2.06
CHD9-213ENST00000564845 LINC00304Q8N9R0 145 aa2.19□□□□□ -2.06
CHD9-213ENST00000564845 EPM2AB3EWF7 344 aa2.19□□□□□ -2.06
CHD9-213ENST00000564845 CIRBP-AS1Q8TBR5 109 aa2.19□□□□□ -2.06
CHD9-213ENST00000564845 RNF213Q63HN8 5207 aa2.19□□□□□ -2.06
CHD9-213ENST00000564845 KRTAP1-5Q9BYS1 174 aa2.19□□□□□ -2.06
CHD9-213ENST00000564845 PRO0461Q9UI25 63 aa2.19□□□□□ -2.06
CHD9-213ENST00000564845 IGLV8-61A0A075B6I0 122 aa2.19□□□□□ -2.06
CHD9-213ENST00000564845 A0A087WVE0 104 aa2.19□□□□□ -2.06
CHD9-213ENST00000564845 IGHV6-1A0A0B4J1U7 121 aa2.19□□□□□ -2.06
CHD9-213ENST00000564845 H7BZZ5 65 aa2.19□□□□□ -2.06
CHD9-213ENST00000564845 DMAC1Q96GE9 116 aa2.19□□□□□ -2.06
CHD9-213ENST00000564845 Q6ZRU5 148 aa2.19□□□□□ -2.06
CHD9-213ENST00000564845 ALMS1Q8TCU4 4167 aa2.19□□□□□ -2.06
CHD9-213ENST00000564845 DNAH5Q8TE73 4624 aa2.18□□□□□ -2.06
CHD9-213ENST00000564845 HRCT1Q6UXD1 115 aa2.18□□□□□ -2.06
CHD9-213ENST00000564845 LINC00528Q8N1L1 170 aa2.18□□□□□ -2.06
CHD9-213ENST00000564845 IGKV3D-7A0A0C4DH55 119 aa2.18□□□□□ -2.06
CHD9-213ENST00000564845 PANO1I0J062 215 aa2.18□□□□□ -2.06
CHD9-213ENST00000564845 SEC61BP60468 96 aaKnown RBP2.18□□□□□ -2.06
CHD9-213ENST00000564845 XGP55808 180 aa2.18□□□□□ -2.06
CHD9-213ENST00000564845 RTL8CO15255 209 aa2.18□□□□□ -2.06
CHD9-213ENST00000564845 LINC00476Q8WZB0 136 aa2.17□□□□□ -2.06
CHD9-213ENST00000564845 LRCOL1A6NCL2 159 aa2.17□□□□□ -2.06
CHD9-213ENST00000564845 SERTAD4-AS1Q5TG53 156 aa2.17□□□□□ -2.06
CHD9-213ENST00000564845 LINC00588Q9Y4M8 146 aa2.17□□□□□ -2.06
CHD9-213ENST00000564845 SACSQ9NZJ4 4579 aa2.17□□□□□ -2.06
CHD9-213ENST00000564845 SPRR1BP22528 89 aa2.17□□□□□ -2.06
CHD9-213ENST00000564845 UBR4Q5T4S7 5183 aa2.16□□□□□ -2.06
CHD9-213ENST00000564845 KTN1-AS1Q86SY8 53 aa2.16□□□□□ -2.06
CHD9-213ENST00000564845 KRTAP11-1Q8IUC1 163 aa2.16□□□□□ -2.06
CHD9-213ENST00000564845 ST20-AS1Q8NBB2 130 aa2.16□□□□□ -2.06
CHD9-213ENST00000564845 IGLV9-49A0A0B4J1Y8 123 aa2.16□□□□□ -2.06
CHD9-213ENST00000564845 SMIM29Q86T20 159 aa2.16□□□□□ -2.06
CHD9-213ENST00000564845 PRLHP81277 87 aa2.15□□□□□ -2.06
CHD9-213ENST00000564845 J3QL48 77 aa2.15□□□□□ -2.07
CHD9-213ENST00000564845 PKD1P98161 4303 aa2.15□□□□□ -2.07
CHD9-213ENST00000564845 APOBP04114 4563 aaKnown RBP2.15□□□□□ -2.07
CHD9-213ENST00000564845 CDIP1Q9H305 208 aa2.14□□□□□ -2.07
CHD9-213ENST00000564845 OBSCN-AS1Q96MR7 158 aa2.14□□□□□ -2.07
CHD9-213ENST00000564845 PHF5AQ7RTV0 110 aaKnown RBP2.14□□□□□ -2.07
CHD9-213ENST00000564845 PLAC8Q9NZF1 115 aa2.14□□□□□ -2.07
CHD9-213ENST00000564845 IGLV7-46A0A075B6I9 117 aa2.14□□□□□ -2.07
CHD9-213ENST00000564845 IGLV7-43P04211 117 aa2.13□□□□□ -2.07
CHD9-213ENST00000564845 CYSTM1Q9H1C7 97 aa2.13□□□□□ -2.07
CHD9-213ENST00000564845 VPS13BQ7Z7G8 4022 aa2.13□□□□□ -2.07
CHD9-213ENST00000564845 M0QZ58 72 aa2.13□□□□□ -2.07
CHD9-213ENST00000564845 SMR3BP02814 79 aaPredicted RBP2.13□□□□□ -2.07
CHD9-213ENST00000564845 LRP1Q07954 4544 aaKnown RBP2.13□□□□□ -2.07
CHD9-213ENST00000564845 MIR22HGQ0VDD5 57 aa2.13□□□□□ -2.07
CHD9-213ENST00000564845 MPLKIPQ8TAP9 179 aa2.13□□□□□ -2.07
CHD9-213ENST00000564845 KRTAP7-1Q8IUC3 87 aa2.12□□□□□ -2.07
CHD9-213ENST00000564845 DYNC2H1Q8NCM8 4307 aaKnown RBP2.12□□□□□ -2.07
CHD9-213ENST00000564845 HERC1Q15751 4861 aa2.12□□□□□ -2.07
CHD9-213ENST00000564845 Q75L30 129 aa2.12□□□□□ -2.07
CHD9-213ENST00000564845 A0A0A0MQY5 61 aa2.12□□□□□ -2.07
CHD9-213ENST00000564845 A0A087WTM6 91 aa2.12□□□□□ -2.07
CHD9-213ENST00000564845 PP632Q6XCG6 107 aa2.12□□□□□ -2.07
CHD9-213ENST00000564845 CSAG1Q6PB30 78 aa2.11□□□□□ -2.07
CHD9-213ENST00000564845 DYNC1H1Q14204 4646 aaKnown RBP2.11□□□□□ -2.07
CHD9-213ENST00000564845 C8orf17Q9NRJ1 99 aa2.11□□□□□ -2.07
CHD9-213ENST00000564845 SPRR1AP35321 89 aa2.11□□□□□ -2.07
CHD9-213ENST00000564845 HSPG2P98160 4391 aa2.1□□□□□ -2.07
CHD9-213ENST00000564845 COA5Q86WW8 74 aa2.1□□□□□ -2.07
CHD9-213ENST00000564845 PRR4Q16378 134 aa2.1□□□□□ -2.07
CHD9-213ENST00000564845 IGKV2D-30A0A075B6S6 120 aa2.1□□□□□ -2.07
CHD9-213ENST00000564845 IGKV2-30P06310 120 aa2.1□□□□□ -2.07
CHD9-213ENST00000564845 LCA10Q71F78 164 aa2.1□□□□□ -2.07
CHD9-213ENST00000564845 Q6ZSA8 131 aa2.09□□□□□ -2.07
CHD9-213ENST00000564845 DMBT1Q9UGM3 2413 aaPredicted RBP2.09□□□□□ -2.07
CHD9-213ENST00000564845 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.09□□□□□ -2.08
CHD9-213ENST00000564845 KRTAP10-2P60368 255 aa2.09□□□□□ -2.08
CHD9-213ENST00000564845 IGFL1Q6UW32 110 aa2.08□□□□□ -2.08
CHD9-213ENST00000564845 Q96NJ1 140 aa2.08□□□□□ -2.08
CHD9-213ENST00000564845 PSPHP1O15172 72 aa2.08□□□□□ -2.08
CHD9-213ENST00000564845 C9orf92A6NGG3 77 aa2.08□□□□□ -2.08
CHD9-213ENST00000564845 KRTAP26-1Q6PEX3 210 aa2.08□□□□□ -2.08
CHD9-213ENST00000564845 LRP2P98164 4655 aa2.06□□□□□ -2.08
CHD9-213ENST00000564845 OCR1Q9BZK8 76 aa2.06□□□□□ -2.08
CHD9-213ENST00000564845 APLNQ9ULZ1 77 aa2.06□□□□□ -2.08
CHD9-213ENST00000564845 Q8N377 158 aa2.06□□□□□ -2.08
CHD9-213ENST00000564845 Q6ZR54 194 aa2.06□□□□□ -2.08
CHD9-213ENST00000564845 LINC01554Q52M75 96 aa2.05□□□□□ -2.08
CHD9-213ENST00000564845 R4GN34 69 aa2.05□□□□□ -2.08
CHD9-213ENST00000564845 HMCN2Q8NDA2 5059 aa2.04□□□□□ -2.08
CHD9-213ENST00000564845 PKHD1L1Q86WI1 4243 aa2.04□□□□□ -2.08
CHD9-213ENST00000564845 SPINT4Q6UDR6 99 aa2.04□□□□□ -2.08
CHD9-213ENST00000564845 LINC01558Q9Y6Z2 57 aa2.04□□□□□ -2.08
CHD9-213ENST00000564845 HERC2O95714 4834 aa2.03□□□□□ -2.08
CHD9-213ENST00000564845 A0A1B0GU33 70 aa2.03□□□□□ -2.08
CHD9-213ENST00000564845 ZCCHC13Q8WW36 166 aaKnown RBP2.03□□□□□ -2.08
CHD9-213ENST00000564845 LINC00472Q9H8W2 130 aa2.03□□□□□ -2.09
CHD9-213ENST00000564845 PRR26Q8N8Z3 221 aa2.02□□□□□ -2.09
CHD9-213ENST00000564845 KRTAP17-1Q9BYP8 105 aa2.02□□□□□ -2.09
CHD9-213ENST00000564845 S4R3F8 94 aa2.02□□□□□ -2.09
CHD9-213ENST00000564845 RPL37P61927 97 aaKnown RBP2.01□□□□□ -2.09
CHD9-213ENST00000564845 PRO2289Q9P1D8 64 aa2.01□□□□□ -2.09
CHD9-213ENST00000564845 A0A1W2PNM2 257 aa2.01□□□□□ -2.09
CHD9-213ENST00000564845 KRTAP4-16G5E9R7 235 aaPredicted RBP1.99□□□□□ -2.09
CHD9-213ENST00000564845 LCE6AA0A183 80 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms