RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 TGP01266 2768 aa9.23□□□□□ -0.93
GTF3C1-205ENST00000564747 NDUFS5O43920 106 aa9.23□□□□□ -0.93
GTF3C1-205ENST00000564747 FBN3Q75N90 2809 aa9.23□□□□□ -0.93
GTF3C1-205ENST00000564747 ZNF861PO60384 105 aa9.23□□□□□ -0.93
GTF3C1-205ENST00000564747 A0A087X002 238 aa9.22□□□□□ -0.93
GTF3C1-205ENST00000564747 NOTCH2NLQ7Z3S9 236 aa9.22□□□□□ -0.93
GTF3C1-205ENST00000564747 PLAC8Q9NZF1 115 aa9.22□□□□□ -0.93
GTF3C1-205ENST00000564747 Q75L30 129 aa9.22□□□□□ -0.93
GTF3C1-205ENST00000564747 CD164Q04900 197 aa9.21□□□□□ -0.94
GTF3C1-205ENST00000564747 LOC101927531A0A1B0GV80 90 aa9.2□□□□□ -0.94
GTF3C1-205ENST00000564747 A6NED7 52 aa9.2□□□□□ -0.94
GTF3C1-205ENST00000564747 CDK2AP2O75956 126 aa9.2□□□□□ -0.94
GTF3C1-205ENST00000564747 Q6ZR54 194 aa9.2□□□□□ -0.94
GTF3C1-205ENST00000564747 MEGF8Q7Z7M0 2845 aa9.2□□□□□ -0.94
GTF3C1-205ENST00000564747 SPTSSBQ8NFR3 76 aa9.18□□□□□ -0.94
GTF3C1-205ENST00000564747 MRPL34Q9BQ48 92 aaKnown RBP9.18□□□□□ -0.94
GTF3C1-205ENST00000564747 LCA10Q71F78 164 aa9.16□□□□□ -0.94
GTF3C1-205ENST00000564747 SPINK6Q6UWN8 80 aa9.15□□□□□ -0.95
GTF3C1-205ENST00000564747 SPAG11AQ6PDA7 123 aa9.14□□□□□ -0.95
GTF3C1-205ENST00000564747 ATP11AUNQ6ZP68 121 aa9.13□□□□□ -0.95
GTF3C1-205ENST00000564747 DNAH6Q9C0G6 4158 aa9.13□□□□□ -0.95
GTF3C1-205ENST00000564747 ALMS1Q8TCU4 4167 aa9.12□□□□□ -0.95
GTF3C1-205ENST00000564747 LINC01558Q9Y6Z2 57 aa9.12□□□□□ -0.95
GTF3C1-205ENST00000564747 IGLV7-43P04211 117 aa9.11□□□□□ -0.95
GTF3C1-205ENST00000564747 CIRBP-AS1Q8TBR5 109 aa9.11□□□□□ -0.95
GTF3C1-205ENST00000564747 DNAH11Q96DT5 4516 aa9.1□□□□□ -0.95
GTF3C1-205ENST00000564747 CDC42SE1Q9NRR8 79 aa9.1□□□□□ -0.95
GTF3C1-205ENST00000564747 KTN1-AS1Q86SY8 53 aa9.09□□□□□ -0.95
GTF3C1-205ENST00000564747 C1orf134Q5TEV5 83 aa9.09□□□□□ -0.95
GTF3C1-205ENST00000564747 HRES1P13985 223 aa9.08□□□□□ -0.96
GTF3C1-205ENST00000564747 Q5W150 140 aa9.08□□□□□ -0.96
GTF3C1-205ENST00000564747 DNAH5Q8TE73 4624 aa9.07□□□□□ -0.96
GTF3C1-205ENST00000564747 A6NN06 94 aa9.03□□□□□ -0.96
GTF3C1-205ENST00000564747 KRTAP13-3Q3SY46 172 aa9.02□□□□□ -0.97
GTF3C1-205ENST00000564747 LY6G6CO95867 125 aa9.01□□□□□ -0.97
GTF3C1-205ENST00000564747 SPINK7P58062 85 aa9□□□□□ -0.97
GTF3C1-205ENST00000564747 SSBP3-AS1Q7Z2R9 100 aa8.99□□□□□ -0.97
GTF3C1-205ENST00000564747 KRTAP10-2P60368 255 aa8.99□□□□□ -0.97
GTF3C1-205ENST00000564747 LRP1BQ9NZR2 4599 aa8.96□□□□□ -0.97
GTF3C1-205ENST00000564747 PRR26Q8N8Z3 221 aa8.95□□□□□ -0.98
GTF3C1-205ENST00000564747 RBM12B-AS1Q9P1G2 102 aa8.94□□□□□ -0.98
GTF3C1-205ENST00000564747 C8orf87E5RJ46 101 aa8.93□□□□□ -0.98
GTF3C1-205ENST00000564747 KRTAP13-2Q52LG2 175 aa8.93□□□□□ -0.98
GTF3C1-205ENST00000564747 LINC00313P59037 77 aa8.92□□□□□ -0.98
GTF3C1-205ENST00000564747 RETNLBQ9BQ08 111 aa8.92□□□□□ -0.98
GTF3C1-205ENST00000564747 C7orf65Q6ZTY9 151 aa8.9□□□□□ -0.98
GTF3C1-205ENST00000564747 ACYP2P14621 99 aa8.9□□□□□ -0.98
GTF3C1-205ENST00000564747 PKD1P98161 4303 aa8.9□□□□□ -0.98
GTF3C1-205ENST00000564747 HYDINQ4G0P3 5121 aa8.88□□□□□ -0.99
GTF3C1-205ENST00000564747 KRTAP10-1P60331 282 aa8.86□□□□□ -0.99
GTF3C1-205ENST00000564747 VPS13BQ7Z7G8 4022 aa8.86□□□□□ -0.99
GTF3C1-205ENST00000564747 FAM229AH3BQW9 127 aa8.84□□□□□ -0.99
GTF3C1-205ENST00000564747 FAT2Q9NYQ8 4349 aa8.84□□□□□ -0.99
GTF3C1-205ENST00000564747 Q6ZSA8 131 aa8.83□□□□□ -1
GTF3C1-205ENST00000564747 DMAC1Q96GE9 116 aa8.83□□□□□ -1
GTF3C1-205ENST00000564747 KRTAP16-1A8MUX0 517 aa8.8□□□□□ -1
GTF3C1-205ENST00000564747 KRTAP1-4P0C5Y4 121 aa8.8□□□□□ -1
GTF3C1-205ENST00000564747 IGKV2-30P06310 120 aa8.8□□□□□ -1
GTF3C1-205ENST00000564747 A0A1B0GU69 56 aa8.77□□□□□ -1.01
GTF3C1-205ENST00000564747 IGKV2D-30A0A075B6S6 120 aa8.73□□□□□ -1.01
GTF3C1-205ENST00000564747 PLA2G1BP04054 148 aaKnown RBP8.72□□□□□ -1.01
GTF3C1-205ENST00000564747 C4orf48Q5BLP8 95 aa8.69□□□□□ -1.02
GTF3C1-205ENST00000564747 TYMSOSQ8TAI1 123 aa8.68□□□□□ -1.02
GTF3C1-205ENST00000564747 KRTAP21-3Q3LHN1 58 aa8.67□□□□□ -1.02
GTF3C1-205ENST00000564747 PKHD1P08F94 4074 aa8.66□□□□□ -1.02
GTF3C1-205ENST00000564747 SPATA8Q6RVD6 105 aa8.66□□□□□ -1.02
GTF3C1-205ENST00000564747 PRAC1Q96KF2 57 aa8.65□□□□□ -1.02
GTF3C1-205ENST00000564747 UQCR11O14957 56 aa8.63□□□□□ -1.03
GTF3C1-205ENST00000564747 SPINK1P00995 79 aa8.63□□□□□ -1.03
GTF3C1-205ENST00000564747 MIR22HGQ0VDD5 57 aa8.63□□□□□ -1.03
GTF3C1-205ENST00000564747 ADM2Q7Z4H4 148 aa8.61□□□□□ -1.03
GTF3C1-205ENST00000564747 LINC00304Q8N9R0 145 aa8.55□□□□□ -1.04
GTF3C1-205ENST00000564747 Q8N1X5 172 aa8.53□□□□□ -1.04
GTF3C1-205ENST00000564747 SACSQ9NZJ4 4579 aa8.52□□□□□ -1.05
GTF3C1-205ENST00000564747 DYNC1H1Q14204 4646 aaKnown RBP8.51□□□□□ -1.05
GTF3C1-205ENST00000564747 SMR3BP02814 79 aaPredicted RBP8.5□□□□□ -1.05
GTF3C1-205ENST00000564747 FAT1Q14517 4588 aa8.49□□□□□ -1.05
GTF3C1-205ENST00000564747 LINC01554Q52M75 96 aa8.47□□□□□ -1.05
GTF3C1-205ENST00000564747 RPS29P62273 56 aaKnown RBP8.46□□□□□ -1.05
GTF3C1-205ENST00000564747 C9orf92A6NGG3 77 aa8.46□□□□□ -1.06
GTF3C1-205ENST00000564747 KMT2CQ8NEZ4 4911 aaKnown RBP8.43□□□□□ -1.06
GTF3C1-205ENST00000564747 APOBP04114 4563 aaKnown RBP8.4□□□□□ -1.06
GTF3C1-205ENST00000564747 PKHD1L1Q86WI1 4243 aa8.4□□□□□ -1.07
GTF3C1-205ENST00000564747 CSAG1Q6PB30 78 aa8.38□□□□□ -1.07
GTF3C1-205ENST00000564747 A8MUU9 505 aa8.37□□□□□ -1.07
GTF3C1-205ENST00000564747 C20orf166-AS1Q96NR2 134 aa8.37□□□□□ -1.07
GTF3C1-205ENST00000564747 KRTAP10-4P60372 401 aaPredicted RBP8.34□□□□□ -1.07
GTF3C1-205ENST00000564747 KRTAP3-1Q9BYR8 98 aa8.34□□□□□ -1.07
GTF3C1-205ENST00000564747 A0A1B0GVY2 172 aa8.29□□□□□ -1.08
GTF3C1-205ENST00000564747 H0YAA0 97 aa8.27□□□□□ -1.08
GTF3C1-205ENST00000564747 RYR2Q92736 4967 aa8.25□□□□□ -1.09
GTF3C1-205ENST00000564747 A0A1B0GU33 70 aa8.21□□□□□ -1.1
GTF3C1-205ENST00000564747 FLG2Q5D862 2391 aaPredicted RBP8.21□□□□□ -1.1
GTF3C1-205ENST00000564747 RYR3Q15413 4870 aa8.2□□□□□ -1.1
GTF3C1-205ENST00000564747 LRP1Q07954 4544 aaKnown RBP8.18□□□□□ -1.1
GTF3C1-205ENST00000564747 FAT3Q8TDW7 4589 aa8.18□□□□□ -1.1
GTF3C1-205ENST00000564747 H1FX-AS1Q4G0G2 97 aa8.16□□□□□ -1.1
GTF3C1-205ENST00000564747 COX6B2Q6YFQ2 88 aa8.14□□□□□ -1.11
GTF3C1-205ENST00000564747 TNXBP22105 4242 aa8.13□□□□□ -1.11
GTF3C1-205ENST00000564747 KRTAP25-1Q3LHN0 102 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms